RNA–Protein interactions for RNA: ENST00000532078.1

DEPDC7-204, Transcript of DEP domain containing 7, humanhuman

TSL 2

Gene DEPDC7, Length 1,118 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC7-204ENST00000532078 AEBP2Q6ZN18 517 aaPredicted RBP39.26■■■■□ 3.88
DEPDC7-204ENST00000532078 CHIC1Q5VXU3 224 aa38.13■■■■□ 3.69
DEPDC7-204ENST00000532078 NISCHQ9Y2I1 1504 aa38.02■■■■□ 3.68
DEPDC7-204ENST00000532078 CCDC180Q9P1Z9 1646 aa34.17■■■■□ 3.06
DEPDC7-204ENST00000532078 ABCC9O60706 1549 aa33.99■■■■□ 3.03
DEPDC7-204ENST00000532078 SENP3Q9H4L4 574 aaPredicted RBP33.46■■■□□ 2.95
DEPDC7-204ENST00000532078 PHF23Q9BUL5 403 aaPredicted RBP33.44■■■□□ 2.94
DEPDC7-204ENST00000532078 RB1CC1Q8TDY2 1594 aa32.45■■■□□ 2.79
DEPDC7-204ENST00000532078 NACADO15069 1562 aa32.24■■■□□ 2.75
DEPDC7-204ENST00000532078 DCAF8L2P0C7V8 631 aa31.96■■■□□ 2.71
DEPDC7-204ENST00000532078 MYO15BQ96JP2 1530 aa31.85■■■□□ 2.69
DEPDC7-204ENST00000532078 DNAJC5BQ9UF47 199 aa31.72■■■□□ 2.67
DEPDC7-204ENST00000532078 UNC13AQ9UPW8 1703 aa31.69■■■□□ 2.66
DEPDC7-204ENST00000532078 PABPN1Q86U42 306 aaKnown RBP eCLIP31.59■■■□□ 2.65
DEPDC7-204ENST00000532078 ZCCHC6Q5VYS8 1495 aaKnown RBP31.55■■■□□ 2.64
DEPDC7-204ENST00000532078 BICRAQ9NZM4 1560 aa31.46■■■□□ 2.63
DEPDC7-204ENST00000532078 DCAF1Q9Y4B6 1507 aa31.45■■■□□ 2.63
DEPDC7-204ENST00000532078 SHROOM4Q9ULL8 1493 aa31.15■■■□□ 2.58
DEPDC7-204ENST00000532078 SCRIBQ14160 1630 aa31.08■■■□□ 2.57
DEPDC7-204ENST00000532078 FOXD1Q16676 465 aa31.02■■■□□ 2.56
DEPDC7-204ENST00000532078 PLPPR3Q6T4P5 718 aa30.88■■■□□ 2.53
DEPDC7-204ENST00000532078 CC2D2AQ9P2K1 1620 aa30.73■■■□□ 2.51
DEPDC7-204ENST00000532078 EIF4G1Q04637 1599 aaKnown RBP30.71■■■□□ 2.51
DEPDC7-204ENST00000532078 CECR2Q9BXF3 1484 aa30.63■■■□□ 2.49
DEPDC7-204ENST00000532078 NCAPD3P42695 1498 aa29.73■■■□□ 2.35
DEPDC7-204ENST00000532078 SMARCA4P51532 1647 aa29.67■■■□□ 2.34
DEPDC7-204ENST00000532078 ATAD2BQ9ULI0 1458 aa29.64■■■□□ 2.34
DEPDC7-204ENST00000532078 SMARCA2P51531 1590 aa29.62■■■□□ 2.33
DEPDC7-204ENST00000532078 PPP6R1Q9UPN7 881 aa29.59■■■□□ 2.33
DEPDC7-204ENST00000532078 HMGXB3Q12766 1538 aa29.57■■■□□ 2.32
DEPDC7-204ENST00000532078 ADRA2BP18089 450 aa29.57■■■□□ 2.32
DEPDC7-204ENST00000532078 BAZ1AQ9NRL2 1556 aaPredicted RBP29.55■■■□□ 2.32
DEPDC7-204ENST00000532078 BAZ1BQ9UIG0 1483 aaKnown RBP29.4■■■□□ 2.3
DEPDC7-204ENST00000532078 PEG3Q9GZU2 1588 aa29.39■■■□□ 2.3
DEPDC7-204ENST00000532078 ERCC6Q03468 1493 aa29.39■■■□□ 2.3
DEPDC7-204ENST00000532078 CUX2O14529 1486 aa29.33■■■□□ 2.29
DEPDC7-204ENST00000532078 MROH2BQ7Z745 1585 aa29.28■■■□□ 2.28
DEPDC7-204ENST00000532078 PIAS4Q8N2W9 510 aaPredicted RBP29.24■■■□□ 2.27
DEPDC7-204ENST00000532078 NESP48681 1621 aa29.21■■■□□ 2.27
DEPDC7-204ENST00000532078 DNAJC5Q9H3Z4 198 aa29.12■■■□□ 2.25
DEPDC7-204ENST00000532078 LAMC3Q9Y6N6 1575 aa29.09■■■□□ 2.25
DEPDC7-204ENST00000532078 THOC2Q8NI27 1593 aaKnown RBP28.96■■■□□ 2.23
DEPDC7-204ENST00000532078 WIZO95785 1651 aa28.93■■■□□ 2.22
DEPDC7-204ENST00000532078 PDS5BQ9NTI5 1447 aa28.9■■■□□ 2.22
DEPDC7-204ENST00000532078 KIF21AQ7Z4S6 1674 aa28.89■■■□□ 2.21
DEPDC7-204ENST00000532078 CADPSQ9ULU8 1353 aa28.82■■■□□ 2.2
DEPDC7-204ENST00000532078 MSH5O43196 834 aa28.8■■■□□ 2.2
DEPDC7-204ENST00000532078 RSF1Q96T23 1441 aaPredicted RBP28.69■■■□□ 2.18
DEPDC7-204ENST00000532078 MRC2Q9UBG0 1479 aa28.66■■■□□ 2.18
DEPDC7-204ENST00000532078 TOP2AP11388 1531 aaKnown RBP28.63■■■□□ 2.17
DEPDC7-204ENST00000532078 WDR62O43379 1518 aa28.59■■■□□ 2.17
DEPDC7-204ENST00000532078 CEP164Q9UPV0 1460 aa28.56■■■□□ 2.16
DEPDC7-204ENST00000532078 CFTRP13569 1480 aa28.53■■■□□ 2.16
DEPDC7-204ENST00000532078 FANCD2Q9BXW9 1451 aa28.51■■■□□ 2.15
DEPDC7-204ENST00000532078 PRDM2Q13029 1718 aa28.32■■■□□ 2.12
DEPDC7-204ENST00000532078 URB2Q14146 1524 aaKnown RBP28.26■■■□□ 2.11
DEPDC7-204ENST00000532078 CCDC88BA6NC98 1476 aa28.24■■■□□ 2.11
DEPDC7-204ENST00000532078 TOPBP1Q92547 1522 aa27.98■■■□□ 2.07
DEPDC7-204ENST00000532078 IFT140Q96RY7 1462 aa27.98■■■□□ 2.07
DEPDC7-204ENST00000532078 ABCC8Q09428 1581 aa27.95■■■□□ 2.07
DEPDC7-204ENST00000532078 DNMBPQ6XZF7 1577 aa27.92■■■□□ 2.06
DEPDC7-204ENST00000532078 OSCARQ8IYS5 282 aa27.92■■■□□ 2.06
DEPDC7-204ENST00000532078 ZNF608Q9ULD9 1512 aaPredicted RBP27.88■■■□□ 2.05
DEPDC7-204ENST00000532078 TRIM41Q8WV44 630 aa27.87■■■□□ 2.05
DEPDC7-204ENST00000532078 EIF4G3O43432 1585 aaKnown RBP27.8■■■□□ 2.04
DEPDC7-204ENST00000532078 TARBP1Q13395 1621 aaKnown RBP27.74■■■□□ 2.03
DEPDC7-204ENST00000532078 POLA1P09884 1462 aaPredicted RBP27.7■■■□□ 2.02
DEPDC7-204ENST00000532078 AQRO60306 1485 aaKnown RBP eCLIP27.63■■■□□ 2.01
DEPDC7-204ENST00000532078 RIMBP3CA6NJZ7 1639 aa27.6■■■□□ 2.01
DEPDC7-204ENST00000532078 RIMBP3BA6NNM3 1639 aa27.6■■■□□ 2.01
DEPDC7-204ENST00000532078 RIMBP3Q9UFD9 1639 aa27.6■■■□□ 2.01
DEPDC7-204ENST00000532078 CHD1O14646 1710 aa27.56■■■□□ 2
DEPDC7-204ENST00000532078 RAD54L2Q9Y4B4 1467 aa27.56■■■□□ 2
DEPDC7-204ENST00000532078 SOGA1O94964 1423 aa27.55■■■□□ 2
DEPDC7-204ENST00000532078 FGD5Q6ZNL6 1462 aa27.54■■■□□ 2
DEPDC7-204ENST00000532078 WDR97A6NE52 1622 aa27.52■■■□□ 2
DEPDC7-204ENST00000532078 ARHGEF11O15085 1522 aa27.52■■■□□ 2
DEPDC7-204ENST00000532078 CUX1P39880 1505 aa27.52■■■□□ 2
DEPDC7-204ENST00000532078 TDRD9Q8NDG6 1382 aaKnown RBP27.47■■□□□ 1.99
DEPDC7-204ENST00000532078 SUPT5HO00267 1087 aaKnown RBP27.43■■□□□ 1.98
DEPDC7-204ENST00000532078 FBLN2P98095 1184 aa27.42■■□□□ 1.98
DEPDC7-204ENST00000532078 SNAPC4Q5SXM2 1469 aa27.39■■□□□ 1.98
DEPDC7-204ENST00000532078 MAGI1Q96QZ7 1491 aaPredicted RBP27.36■■□□□ 1.97
DEPDC7-204ENST00000532078 GRIN2BQ13224 1484 aa27.34■■□□□ 1.97
DEPDC7-204ENST00000532078 PBRM1Q86U86 1689 aa27.27■■□□□ 1.96
DEPDC7-204ENST00000532078 SYNJ1O43426 1573 aa27.26■■□□□ 1.95
DEPDC7-204ENST00000532078 CLASP1Q7Z460 1538 aa27.26■■□□□ 1.95
DEPDC7-204ENST00000532078 CHMP7Q8WUX9 453 aaPredicted RBP27.25■■□□□ 1.95
DEPDC7-204ENST00000532078 ABCA10Q8WWZ4 1543 aa27.25■■□□□ 1.95
DEPDC7-204ENST00000532078 SYNJ2O15056 1496 aa27.25■■□□□ 1.95
DEPDC7-204ENST00000532078 ARAP1Q96P48 1450 aa27.25■■□□□ 1.95
DEPDC7-204ENST00000532078 GAPVD1Q14C86 1478 aa27.24■■□□□ 1.95
DEPDC7-204ENST00000532078 CYB5RLQ6IPT4 315 aa27.23■■□□□ 1.95
DEPDC7-204ENST00000532078 ABCA5Q8WWZ7 1642 aa27.22■■□□□ 1.95
DEPDC7-204ENST00000532078 SCAF1Q9H7N4 1312 aaKnown RBP27.16■■□□□ 1.94
DEPDC7-204ENST00000532078 WRNQ14191 1432 aaPredicted RBP eCLIP27.15■■□□□ 1.94
DEPDC7-204ENST00000532078 PPP4R3CPQ6ZMV5 832 aa27.14■■□□□ 1.94
DEPDC7-204ENST00000532078 BIVM-ERCC5R4GMW8 1640 aa27.14■■□□□ 1.94
DEPDC7-204ENST00000532078 TOP2BQ02880 1626 aa27.13■■□□□ 1.93
DEPDC7-204ENST00000532078 ADAMTS12P58397 1594 aa27.01■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 121.4 ms