RNA–Protein interactions for RNA: ENST00000531542.1

AMBRA1-210, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-210ENST00000531542 ZNF142P52746 1687 aaPredicted RBP21.02■□□□□ 0.96
AMBRA1-210ENST00000531542 MAST1Q9Y2H9 1570 aa21.02■□□□□ 0.95
AMBRA1-210ENST00000531542 CEP170BQ9Y4F5 1589 aaPredicted RBP21.02■□□□□ 0.95
AMBRA1-210ENST00000531542 MYO3AQ8NEV4 1616 aa21.01■□□□□ 0.95
AMBRA1-210ENST00000531542 KDM5DQ9BY66 1539 aa21.01■□□□□ 0.95
AMBRA1-210ENST00000531542 WASHC2CQ9Y4E1 1318 aa21.01■□□□□ 0.95
AMBRA1-210ENST00000531542 TCOF1Q13428 1488 aaKnown RBP21.01■□□□□ 0.95
AMBRA1-210ENST00000531542 PZPP20742 1482 aa21■□□□□ 0.95
AMBRA1-210ENST00000531542 LTBP4Q8N2S1 1624 aa20.99■□□□□ 0.95
AMBRA1-210ENST00000531542 A2ML1A8K2U0 1454 aa20.99■□□□□ 0.95
AMBRA1-210ENST00000531542 IQSEC2Q5JU85 1478 aa20.99■□□□□ 0.95
AMBRA1-210ENST00000531542 NCKAP5LQ9HCH0 1330 aa20.96■□□□□ 0.95
AMBRA1-210ENST00000531542 TNRQ92752 1358 aa20.96■□□□□ 0.95
AMBRA1-210ENST00000531542 APLP2Q06481 763 aa20.95■□□□□ 0.94
AMBRA1-210ENST00000531542 FBXO31Q5XUX0 539 aaPredicted RBP20.95■□□□□ 0.94
AMBRA1-210ENST00000531542 DNMT1P26358 1616 aaKnown RBP20.92■□□□□ 0.94
AMBRA1-210ENST00000531542 RNF17Q9BXT8 1623 aaKnown RBP20.92■□□□□ 0.94
AMBRA1-210ENST00000531542 NLRP1Q9C000 1473 aa20.91■□□□□ 0.94
AMBRA1-210ENST00000531542 EIF2AK4Q9P2K8 1649 aaKnown RBP20.91■□□□□ 0.94
AMBRA1-210ENST00000531542 SHANK2Q9UPX8 1470 aa20.9■□□□□ 0.94
AMBRA1-210ENST00000531542 DUOX2Q9NRD8 1548 aa20.88■□□□□ 0.93
AMBRA1-210ENST00000531542 THEMISQ8N1K5 641 aaPredicted RBP20.88■□□□□ 0.93
AMBRA1-210ENST00000531542 ABCC3O15438 1527 aa20.88■□□□□ 0.93
AMBRA1-210ENST00000531542 ABCC5O15440 1437 aa20.87■□□□□ 0.93
AMBRA1-210ENST00000531542 ZNF335Q9H4Z2 1342 aaPredicted RBP20.87■□□□□ 0.93
AMBRA1-210ENST00000531542 ZC3H13Q5T200 1668 aaKnown RBP20.86■□□□□ 0.93
AMBRA1-210ENST00000531542 FGD6Q6ZV73 1430 aa20.85■□□□□ 0.93
AMBRA1-210ENST00000531542 KIF15Q9NS87 1388 aa20.85■□□□□ 0.93
AMBRA1-210ENST00000531542 ERBINQ96RT1 1412 aa20.84■□□□□ 0.93
AMBRA1-210ENST00000531542 MROH1Q8NDA8 1641 aa20.83■□□□□ 0.93
AMBRA1-210ENST00000531542 ANKLE2Q86XL3 938 aa20.83■□□□□ 0.93
AMBRA1-210ENST00000531542 SPATA31D1Q6ZQQ2 1576 aa20.83■□□□□ 0.92
AMBRA1-210ENST00000531542 PTPN23Q9H3S7 1636 aa20.82■□□□□ 0.92
AMBRA1-210ENST00000531542 DAPK1P53355 1430 aa20.82■□□□□ 0.92
AMBRA1-210ENST00000531542 UGGT1Q9NYU2 1555 aa20.81■□□□□ 0.92
AMBRA1-210ENST00000531542 ARHGAP31Q2M1Z3 1444 aa20.81■□□□□ 0.92
AMBRA1-210ENST00000531542 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.81■□□□□ 0.92
AMBRA1-210ENST00000531542 MED14O60244 1454 aa20.8■□□□□ 0.92
AMBRA1-210ENST00000531542 ERVK-7P63135 1459 aa20.8■□□□□ 0.92
AMBRA1-210ENST00000531542 RRP7BPQ9NSQ0 103 aa20.79■□□□□ 0.92
AMBRA1-210ENST00000531542 NEURL4Q96JN8 1562 aa20.79■□□□□ 0.92
AMBRA1-210ENST00000531542 PRDM15P57071 1507 aaPredicted RBP20.78■□□□□ 0.92
AMBRA1-210ENST00000531542 CROCC2H7BZ55 1655 aa20.77■□□□□ 0.92
AMBRA1-210ENST00000531542 ANKRD30AQ9BXX3 1397 aa20.77■□□□□ 0.92
AMBRA1-210ENST00000531542 DEPDC5O75140 1603 aa20.77■□□□□ 0.92
AMBRA1-210ENST00000531542 POLR1AO95602 1720 aaPredicted RBP20.75■□□□□ 0.91
AMBRA1-210ENST00000531542 CPS1P31327 1500 aa20.74■□□□□ 0.91
AMBRA1-210ENST00000531542 NPHP4O75161 1426 aaPredicted RBP20.74■□□□□ 0.91
AMBRA1-210ENST00000531542 KANK1Q14678 1352 aa20.72■□□□□ 0.91
AMBRA1-210ENST00000531542 ADGRL2O95490 1459 aa20.71■□□□□ 0.91
AMBRA1-210ENST00000531542 UBAP1LF5GYI3 381 aa20.71■□□□□ 0.91
AMBRA1-210ENST00000531542 LMTK2Q8IWU2 1503 aa20.7■□□□□ 0.9
AMBRA1-210ENST00000531542 VWDEQ8N2E2 1590 aa20.68■□□□□ 0.9
AMBRA1-210ENST00000531542 CEP152O94986 1710 aa20.68■□□□□ 0.9
AMBRA1-210ENST00000531542 CHIC2Q9UKJ5 165 aa20.68■□□□□ 0.9
AMBRA1-210ENST00000531542 ARHGAP23Q9P227 1491 aa20.67■□□□□ 0.9
AMBRA1-210ENST00000531542 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.66■□□□□ 0.9
AMBRA1-210ENST00000531542 SLIT1O75093 1534 aa20.65■□□□□ 0.9
AMBRA1-210ENST00000531542 TOM1O60784 492 aa20.64■□□□□ 0.89
AMBRA1-210ENST00000531542 UBR1Q8IWV7 1749 aa20.64■□□□□ 0.89
AMBRA1-210ENST00000531542 SCAF11Q99590 1463 aaKnown RBP20.63■□□□□ 0.89
AMBRA1-210ENST00000531542 IQGAP1P46940 1657 aa20.63■□□□□ 0.89
AMBRA1-210ENST00000531542 FAM50AQ14320 339 aaKnown RBP20.62■□□□□ 0.89
AMBRA1-210ENST00000531542 DISP3Q9P2K9 1392 aa20.61■□□□□ 0.89
AMBRA1-210ENST00000531542 LTKP29376 864 aa20.61■□□□□ 0.89
AMBRA1-210ENST00000531542 NOS1P29475 1434 aa20.61■□□□□ 0.89
AMBRA1-210ENST00000531542 ANKRD50Q9ULJ7 1429 aa20.61■□□□□ 0.89
AMBRA1-210ENST00000531542 TXNDC2Q86VQ3 553 aa20.6■□□□□ 0.89
AMBRA1-210ENST00000531542 EID1Q9Y6B2 187 aa20.6■□□□□ 0.89
AMBRA1-210ENST00000531542 TMEM2Q9UHN6 1383 aa20.59■□□□□ 0.89
AMBRA1-210ENST00000531542 IDI1Q13907 227 aa20.59■□□□□ 0.89
AMBRA1-210ENST00000531542 KDM5AP29375 1690 aaKnown RBP20.58■□□□□ 0.89
AMBRA1-210ENST00000531542 SLC52A1Q9NWF4 448 aa20.58■□□□□ 0.89
AMBRA1-210ENST00000531542 EFCAB6Q5THR3 1501 aa20.58■□□□□ 0.88
AMBRA1-210ENST00000531542 RPRD2Q5VT52 1461 aaKnown RBP20.57■□□□□ 0.88
AMBRA1-210ENST00000531542 ROCK1Q13464 1354 aa20.56■□□□□ 0.88
AMBRA1-210ENST00000531542 LRRC7Q96NW7 1537 aa20.55■□□□□ 0.88
AMBRA1-210ENST00000531542 STAG3Q9UJ98 1225 aa20.55■□□□□ 0.88
AMBRA1-210ENST00000531542 CFAP65Q6ZU64 1925 aaKnown RBP20.55■□□□□ 0.88
AMBRA1-210ENST00000531542 PIK3C2BO00750 1634 aa20.54■□□□□ 0.88
AMBRA1-210ENST00000531542 SYNMO15061 1565 aa20.52■□□□□ 0.88
AMBRA1-210ENST00000531542 HSPA1LP34931 641 aa20.5■□□□□ 0.87
AMBRA1-210ENST00000531542 PIP4K2BP78356 416 aa20.5■□□□□ 0.87
AMBRA1-210ENST00000531542 ALKQ9UM73 1620 aa20.49■□□□□ 0.87
AMBRA1-210ENST00000531542 ILDR2Q71H61 639 aa20.49■□□□□ 0.87
AMBRA1-210ENST00000531542 STRCP1A6NGW2 1772 aa20.49■□□□□ 0.87
AMBRA1-210ENST00000531542 SCAF1Q9H7N4 1312 aaKnown RBP20.47■□□□□ 0.87
AMBRA1-210ENST00000531542 ADGRB3O60242 1522 aa20.47■□□□□ 0.87
AMBRA1-210ENST00000531542 TET3O43151 1660 aa20.46■□□□□ 0.87
AMBRA1-210ENST00000531542 KCNA6P17658 529 aa20.45■□□□□ 0.86
AMBRA1-210ENST00000531542 UNC13BO14795 1591 aa20.45■□□□□ 0.86
AMBRA1-210ENST00000531542 SOCS7O14512 581 aa20.43■□□□□ 0.86
AMBRA1-210ENST00000531542 HDGFP51858 240 aaKnown RBP20.43■□□□□ 0.86
AMBRA1-210ENST00000531542 ZFYVE9O95405 1425 aa20.42■□□□□ 0.86
AMBRA1-210ENST00000531542 PLEKHG1Q9ULL1 1385 aa20.39■□□□□ 0.85
AMBRA1-210ENST00000531542 GCC2Q8IWJ2 1684 aa20.38■□□□□ 0.85
AMBRA1-210ENST00000531542 SLC26A8Q96RN1 970 aa20.38■□□□□ 0.85
AMBRA1-210ENST00000531542 NUP155O75694 1391 aa20.37■□□□□ 0.85
AMBRA1-210ENST00000531542 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.37■□□□□ 0.85
AMBRA1-210ENST00000531542 IQGAP3Q86VI3 1631 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms