RNA–Protein interactions for RNA: ENST00000531502.5

CTSB-221, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 557 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-221ENST00000531502 RSPH4AQ5TD94 716 aa23.09■■□□□ 1.29
CTSB-221ENST00000531502 FAM135AQ9P2D6 1515 aa23.08■■□□□ 1.29
CTSB-221ENST00000531502 FBXO31Q5XUX0 539 aaPredicted RBP23.08■■□□□ 1.29
CTSB-221ENST00000531502 KDM5DQ9BY66 1539 aa23.08■■□□□ 1.28
CTSB-221ENST00000531502 SPATA31D1Q6ZQQ2 1576 aa23.07■■□□□ 1.28
CTSB-221ENST00000531502 PZPP20742 1482 aa23.07■■□□□ 1.28
CTSB-221ENST00000531502 ARHGEF5Q12774 1597 aa23.06■■□□□ 1.28
CTSB-221ENST00000531502 TNRQ92752 1358 aa23.06■■□□□ 1.28
CTSB-221ENST00000531502 NEURL4Q96JN8 1562 aa23.04■■□□□ 1.28
CTSB-221ENST00000531502 UBAP1LF5GYI3 381 aa23.03■■□□□ 1.28
CTSB-221ENST00000531502 POLR1AO95602 1720 aaPredicted RBP23.02■■□□□ 1.28
CTSB-221ENST00000531502 WASHC2CQ9Y4E1 1318 aa23.02■■□□□ 1.28
CTSB-221ENST00000531502 LRRC9Q6ZRR7 1453 aa23■■□□□ 1.27
CTSB-221ENST00000531502 SOCS7O14512 581 aa23■■□□□ 1.27
CTSB-221ENST00000531502 MIA2Q96PC5 1412 aa22.99■■□□□ 1.27
CTSB-221ENST00000531502 TSPY4P0CV99 314 aa22.98■■□□□ 1.27
CTSB-221ENST00000531502 TSPY10P0CW01 314 aa22.98■■□□□ 1.27
CTSB-221ENST00000531502 VPS8Q8N3P4 1428 aa22.98■■□□□ 1.27
CTSB-221ENST00000531502 MAST1Q9Y2H9 1570 aa22.97■■□□□ 1.27
CTSB-221ENST00000531502 RNF17Q9BXT8 1623 aaKnown RBP22.97■■□□□ 1.27
CTSB-221ENST00000531502 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.96■■□□□ 1.272e-6■■□□□ 11.9
CTSB-221ENST00000531502 NLRP1Q9C000 1473 aa22.96■■□□□ 1.27
CTSB-221ENST00000531502 UGGT1Q9NYU2 1555 aa22.93■■□□□ 1.26
CTSB-221ENST00000531502 CPS1P31327 1500 aa22.93■■□□□ 1.26
CTSB-221ENST00000531502 SHANK2Q9UPX8 1470 aa22.93■■□□□ 1.26
CTSB-221ENST00000531502 THEMISQ8N1K5 641 aaPredicted RBP22.93■■□□□ 1.26
CTSB-221ENST00000531502 ABCC3O15438 1527 aa22.92■■□□□ 1.26
CTSB-221ENST00000531502 KANK4Q5T7N3 995 aaPredicted RBP22.92■■□□□ 1.26
CTSB-221ENST00000531502 ANKLE2Q86XL3 938 aa22.92■■□□□ 1.26
CTSB-221ENST00000531502 VWDEQ8N2E2 1590 aa22.92■■□□□ 1.26
CTSB-221ENST00000531502 MED14O60244 1454 aa22.92■■□□□ 1.26
CTSB-221ENST00000531502 DEPDC5O75140 1603 aa22.91■■□□□ 1.26
CTSB-221ENST00000531502 LOC105371045A0A1W2PR82 267 aa22.91■■□□□ 1.26
CTSB-221ENST00000531502 MAP3K1Q13233 1512 aa22.91■■□□□ 1.26
CTSB-221ENST00000531502 ZC3H13Q5T200 1668 aaKnown RBP22.9■■□□□ 1.26
CTSB-221ENST00000531502 MROH1Q8NDA8 1641 aa22.9■■□□□ 1.26
CTSB-221ENST00000531502 EIF2AK4Q9P2K8 1649 aaKnown RBP22.9■■□□□ 1.26
CTSB-221ENST00000531502 NPHP4O75161 1426 aaPredicted RBP22.88■■□□□ 1.25
CTSB-221ENST00000531502 MYOM3Q5VTT5 1437 aa22.87■■□□□ 1.25
CTSB-221ENST00000531502 ERVK-7P63135 1459 aa22.85■■□□□ 1.25
CTSB-221ENST00000531502 TOM1O60784 492 aa22.83■■□□□ 1.25
CTSB-221ENST00000531502 HSPA1LP34931 641 aa22.83■■□□□ 1.25
CTSB-221ENST00000531502 IQGAP1P46940 1657 aa22.83■■□□□ 1.24
CTSB-221ENST00000531502 ALKQ9UM73 1620 aa22.82■■□□□ 1.24
CTSB-221ENST00000531502 CEP152O94986 1710 aa22.82■■□□□ 1.24
CTSB-221ENST00000531502 PIP4K2BP78356 416 aa22.81■■□□□ 1.24
CTSB-221ENST00000531502 DUOX2Q9NRD8 1548 aa22.81■■□□□ 1.24
CTSB-221ENST00000531502 STRCP1A6NGW2 1772 aa22.8■■□□□ 1.24
CTSB-221ENST00000531502 SCAF1Q9H7N4 1312 aaKnown RBP22.79■■□□□ 1.24
CTSB-221ENST00000531502 CFAP65Q6ZU64 1925 aaKnown RBP22.78■■□□□ 1.24
CTSB-221ENST00000531502 UBR1Q8IWV7 1749 aa22.78■■□□□ 1.24
CTSB-221ENST00000531502 PRDM15P57071 1507 aaPredicted RBP22.76■■□□□ 1.23
CTSB-221ENST00000531502 ABCC5O15440 1437 aa22.75■■□□□ 1.23
CTSB-221ENST00000531502 ARHGAP31Q2M1Z3 1444 aa22.75■■□□□ 1.23
CTSB-221ENST00000531502 CROCC2H7BZ55 1655 aa22.75■■□□□ 1.23
CTSB-221ENST00000531502 KIF15Q9NS87 1388 aa22.75■■□□□ 1.23
CTSB-221ENST00000531502 LRRC7Q96NW7 1537 aa22.74■■□□□ 1.23
CTSB-221ENST00000531502 MED1Q15648 1581 aaPredicted RBP22.74■■□□□ 1.23
CTSB-221ENST00000531502 ARHGAP23Q9P227 1491 aa22.73■■□□□ 1.23
CTSB-221ENST00000531502 ERBINQ96RT1 1412 aa22.73■■□□□ 1.23
CTSB-221ENST00000531502 PTPN23Q9H3S7 1636 aa22.71■■□□□ 1.23
CTSB-221ENST00000531502 SCAF11Q99590 1463 aaKnown RBP22.71■■□□□ 1.23
CTSB-221ENST00000531502 SLIT1O75093 1534 aa22.71■■□□□ 1.23
CTSB-221ENST00000531502 SYNMO15061 1565 aa22.71■■□□□ 1.23
CTSB-221ENST00000531502 LTKP29376 864 aa22.7■■□□□ 1.22
CTSB-221ENST00000531502 RRP7BPQ9NSQ0 103 aa22.69■■□□□ 1.22
CTSB-221ENST00000531502 DAPK1P53355 1430 aa22.68■■□□□ 1.22
CTSB-221ENST00000531502 TXNDC2Q86VQ3 553 aa22.65■■□□□ 1.22
CTSB-221ENST00000531502 FGD6Q6ZV73 1430 aa22.65■■□□□ 1.22
CTSB-221ENST00000531502 PIK3C2BO00750 1634 aa22.64■■□□□ 1.22
CTSB-221ENST00000531502 LMTK2Q8IWU2 1503 aa22.62■■□□□ 1.21
CTSB-221ENST00000531502 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.62■■□□□ 1.21
CTSB-221ENST00000531502 XIRP1Q702N8 1843 aaKnown RBP22.61■■□□□ 1.21
CTSB-221ENST00000531502 TMEM2Q9UHN6 1383 aa22.61■■□□□ 1.21
CTSB-221ENST00000531502 KDM5AP29375 1690 aaKnown RBP22.59■■□□□ 1.21
CTSB-221ENST00000531502 KANK1Q14678 1352 aa22.59■■□□□ 1.21
CTSB-221ENST00000531502 APLP2Q06481 763 aa22.58■■□□□ 1.21
CTSB-221ENST00000531502 EID1Q9Y6B2 187 aa22.58■■□□□ 1.21
CTSB-221ENST00000531502 IDI1Q13907 227 aa22.57■■□□□ 1.2
CTSB-221ENST00000531502 CHIC2Q9UKJ5 165 aa22.57■■□□□ 1.2
CTSB-221ENST00000531502 ANKRD30AQ9BXX3 1397 aa22.57■■□□□ 1.2
CTSB-221ENST00000531502 EFCAB6Q5THR3 1501 aa22.56■■□□□ 1.2
CTSB-221ENST00000531502 NOS1P29475 1434 aa22.55■■□□□ 1.2
CTSB-221ENST00000531502 TET3O43151 1660 aa22.53■■□□□ 1.2
CTSB-221ENST00000531502 SENP3Q9H4L4 574 aaPredicted RBP22.53■■□□□ 1.2
CTSB-221ENST00000531502 ADGRL2O95490 1459 aa22.53■■□□□ 1.2
CTSB-221ENST00000531502 STAG3Q9UJ98 1225 aa22.52■■□□□ 1.2
CTSB-221ENST00000531502 PHF23Q9BUL5 403 aaPredicted RBP22.49■■□□□ 1.19
CTSB-221ENST00000531502 ADGRB3O60242 1522 aa22.48■■□□□ 1.19
CTSB-221ENST00000531502 KCNA6P17658 529 aa22.48■■□□□ 1.19
CTSB-221ENST00000531502 FAM135BQ49AJ0 1406 aa22.48■■□□□ 1.19
CTSB-221ENST00000531502 TMEM94Q12767 1356 aa22.47■■□□□ 1.19
CTSB-221ENST00000531502 SLC26A8Q96RN1 970 aa22.46■■□□□ 1.19
CTSB-221ENST00000531502 SLC52A1Q9NWF4 448 aa22.45■■□□□ 1.18
CTSB-221ENST00000531502 NWD1Q149M9 1564 aa22.43■■□□□ 1.18
CTSB-221ENST00000531502 RPRD2Q5VT52 1461 aaKnown RBP22.43■■□□□ 1.18
CTSB-221ENST00000531502 ANKRD50Q9ULJ7 1429 aa22.43■■□□□ 1.18
CTSB-221ENST00000531502 RGS17Q9UGC6 210 aaPredicted RBP22.43■■□□□ 1.18
CTSB-221ENST00000531502 NKTRP30414 1462 aaKnown RBP22.41■■□□□ 1.18
CTSB-221ENST00000531502 ZFYVE9O95405 1425 aa22.4■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 250.2 ms