RNA–Protein interactions for RNA: ENST00000530640.6

CTSB-219, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CTSB, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-219ENST00000530640 FAM135AQ9P2D6 1515 aa23.94■■□□□ 1.42
CTSB-219ENST00000530640 ZNF142P52746 1687 aaPredicted RBP23.93■■□□□ 1.42
CTSB-219ENST00000530640 NCKAP5LQ9HCH0 1330 aa23.92■■□□□ 1.42
CTSB-219ENST00000530640 MAST1Q9Y2H9 1570 aa23.92■■□□□ 1.42
CTSB-219ENST00000530640 CEP170BQ9Y4F5 1589 aaPredicted RBP23.92■■□□□ 1.42
CTSB-219ENST00000530640 TSPY4P0CV99 314 aa23.91■■□□□ 1.42
CTSB-219ENST00000530640 TSPY10P0CW01 314 aa23.91■■□□□ 1.42
CTSB-219ENST00000530640 TCOF1Q13428 1488 aaKnown RBP23.91■■□□□ 1.42
CTSB-219ENST00000530640 MYO3AQ8NEV4 1616 aa23.91■■□□□ 1.42
CTSB-219ENST00000530640 RRBP1Q9P2E9 1410 aaKnown RBP23.9■■□□□ 1.42
CTSB-219ENST00000530640 KIF3BO15066 747 aa23.89■■□□□ 1.41
CTSB-219ENST00000530640 PTPN23Q9H3S7 1636 aa23.89■■□□□ 1.41
CTSB-219ENST00000530640 A2ML1A8K2U0 1454 aa23.88■■□□□ 1.41
CTSB-219ENST00000530640 FGD6Q6ZV73 1430 aa23.87■■□□□ 1.41
CTSB-219ENST00000530640 DISP3Q9P2K9 1392 aa23.87■■□□□ 1.41
CTSB-219ENST00000530640 CROCC2H7BZ55 1655 aa23.84■■□□□ 1.41
CTSB-219ENST00000530640 WASHC2CQ9Y4E1 1318 aa23.84■■□□□ 1.41
CTSB-219ENST00000530640 ZNF335Q9H4Z2 1342 aaPredicted RBP23.83■■□□□ 1.41
CTSB-219ENST00000530640 PZPP20742 1482 aa23.82■■□□□ 1.4
CTSB-219ENST00000530640 TNRQ92752 1358 aa23.82■■□□□ 1.4
CTSB-219ENST00000530640 KDM5DQ9BY66 1539 aa23.82■■□□□ 1.4
CTSB-219ENST00000530640 SHANK2Q9UPX8 1470 aa23.81■■□□□ 1.4
CTSB-219ENST00000530640 THEMISQ8N1K5 641 aaPredicted RBP23.79■■□□□ 1.4
CTSB-219ENST00000530640 DNMT1P26358 1616 aaKnown RBP23.79■■□□□ 1.4
CTSB-219ENST00000530640 EIF2AK4Q9P2K8 1649 aaKnown RBP23.79■■□□□ 1.4
CTSB-219ENST00000530640 UBAP1LF5GYI3 381 aa23.78■■□□□ 1.4
CTSB-219ENST00000530640 RNF17Q9BXT8 1623 aaKnown RBP23.77■■□□□ 1.4
CTSB-219ENST00000530640 ANKLE2Q86XL3 938 aa23.77■■□□□ 1.4
CTSB-219ENST00000530640 ABCC5O15440 1437 aa23.76■■□□□ 1.39
CTSB-219ENST00000530640 NLRP1Q9C000 1473 aa23.76■■□□□ 1.39
CTSB-219ENST00000530640 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.76■■□□□ 1.392e-6■■□□□ 11.9
CTSB-219ENST00000530640 FBXO31Q5XUX0 539 aaPredicted RBP23.76■■□□□ 1.39
CTSB-219ENST00000530640 DAPK1P53355 1430 aa23.75■■□□□ 1.39
CTSB-219ENST00000530640 TRIM26Q12899 539 aaPredicted RBP23.75■■□□□ 1.39
CTSB-219ENST00000530640 DUOX2Q9NRD8 1548 aa23.75■■□□□ 1.39
CTSB-219ENST00000530640 SOCS7O14512 581 aa23.73■■□□□ 1.39
CTSB-219ENST00000530640 ZC3H13Q5T200 1668 aaKnown RBP23.72■■□□□ 1.39
CTSB-219ENST00000530640 CPS1P31327 1500 aa23.71■■□□□ 1.39
CTSB-219ENST00000530640 KIF15Q9NS87 1388 aa23.71■■□□□ 1.39
CTSB-219ENST00000530640 SPATA31D1Q6ZQQ2 1576 aa23.7■■□□□ 1.38
CTSB-219ENST00000530640 ILDR2Q71H61 639 aa23.69■■□□□ 1.38
CTSB-219ENST00000530640 TOM1O60784 492 aa23.68■■□□□ 1.38
CTSB-219ENST00000530640 MROH1Q8NDA8 1641 aa23.68■■□□□ 1.38
CTSB-219ENST00000530640 ERBINQ96RT1 1412 aa23.67■■□□□ 1.38
CTSB-219ENST00000530640 ABCC3O15438 1527 aa23.67■■□□□ 1.38
CTSB-219ENST00000530640 UGGT1Q9NYU2 1555 aa23.67■■□□□ 1.38
CTSB-219ENST00000530640 POLR1AO95602 1720 aaPredicted RBP23.67■■□□□ 1.38
CTSB-219ENST00000530640 MED14O60244 1454 aa23.66■■□□□ 1.38
CTSB-219ENST00000530640 CEP152O94986 1710 aa23.64■■□□□ 1.37
CTSB-219ENST00000530640 NEURL4Q96JN8 1562 aa23.64■■□□□ 1.37
CTSB-219ENST00000530640 RRP7BPQ9NSQ0 103 aa23.64■■□□□ 1.37
CTSB-219ENST00000530640 PRDM15P57071 1507 aaPredicted RBP23.63■■□□□ 1.37
CTSB-219ENST00000530640 ANKRD30AQ9BXX3 1397 aa23.63■■□□□ 1.37
CTSB-219ENST00000530640 FAM50AQ14320 339 aaKnown RBP23.63■■□□□ 1.37
CTSB-219ENST00000530640 DEPDC5O75140 1603 aa23.62■■□□□ 1.37
CTSB-219ENST00000530640 NPHP4O75161 1426 aaPredicted RBP23.61■■□□□ 1.37
CTSB-219ENST00000530640 CHIC2Q9UKJ5 165 aa23.61■■□□□ 1.37
CTSB-219ENST00000530640 ADGRL2O95490 1459 aa23.59■■□□□ 1.37
CTSB-219ENST00000530640 ERVK-7P63135 1459 aa23.55■■□□□ 1.36
CTSB-219ENST00000530640 VWDEQ8N2E2 1590 aa23.54■■□□□ 1.36
CTSB-219ENST00000530640 ARHGAP31Q2M1Z3 1444 aa23.54■■□□□ 1.36
CTSB-219ENST00000530640 PCGF6Q9BYE7 350 aa23.52■■□□□ 1.36
CTSB-219ENST00000530640 KANK1Q14678 1352 aa23.52■■□□□ 1.36
CTSB-219ENST00000530640 SCAF1Q9H7N4 1312 aaKnown RBP23.51■■□□□ 1.35
CTSB-219ENST00000530640 HSPA1LP34931 641 aa23.51■■□□□ 1.35
CTSB-219ENST00000530640 PIP4K2BP78356 416 aa23.51■■□□□ 1.35
CTSB-219ENST00000530640 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.51■■□□□ 1.35
CTSB-219ENST00000530640 IQGAP1P46940 1657 aa23.5■■□□□ 1.35
CTSB-219ENST00000530640 ANKRD50Q9ULJ7 1429 aa23.46■■□□□ 1.35
CTSB-219ENST00000530640 EID1Q9Y6B2 187 aa23.46■■□□□ 1.35
CTSB-219ENST00000530640 LMTK2Q8IWU2 1503 aa23.46■■□□□ 1.35
CTSB-219ENST00000530640 CFAP65Q6ZU64 1925 aaKnown RBP23.46■■□□□ 1.35
CTSB-219ENST00000530640 SCAF11Q99590 1463 aaKnown RBP23.45■■□□□ 1.34
CTSB-219ENST00000530640 GCC2Q8IWJ2 1684 aa23.44■■□□□ 1.34
CTSB-219ENST00000530640 SLIT1O75093 1534 aa23.44■■□□□ 1.34
CTSB-219ENST00000530640 TXNDC2Q86VQ3 553 aa23.43■■□□□ 1.34
CTSB-219ENST00000530640 ARHGAP23Q9P227 1491 aa23.43■■□□□ 1.34
CTSB-219ENST00000530640 ROCK1Q13464 1354 aa23.42■■□□□ 1.34
CTSB-219ENST00000530640 UBR1Q8IWV7 1749 aa23.42■■□□□ 1.34
CTSB-219ENST00000530640 ITGAEP38570 1179 aa23.41■■□□□ 1.34
CTSB-219ENST00000530640 EFCAB6Q5THR3 1501 aa23.41■■□□□ 1.34
CTSB-219ENST00000530640 LRRC7Q96NW7 1537 aa23.41■■□□□ 1.34
CTSB-219ENST00000530640 SYNMO15061 1565 aa23.41■■□□□ 1.34
CTSB-219ENST00000530640 HFM1A2PYH4 1435 aa23.4■■□□□ 1.34
CTSB-219ENST00000530640 STAG3Q9UJ98 1225 aa23.39■■□□□ 1.33
CTSB-219ENST00000530640 LTKP29376 864 aa23.38■■□□□ 1.33
CTSB-219ENST00000530640 UNC13BO14795 1591 aa23.38■■□□□ 1.33
CTSB-219ENST00000530640 TMEM2Q9UHN6 1383 aa23.36■■□□□ 1.33
CTSB-219ENST00000530640 NAIPQ13075 1403 aa23.36■■□□□ 1.33
CTSB-219ENST00000530640 KDM5AP29375 1690 aaKnown RBP23.35■■□□□ 1.33
CTSB-219ENST00000530640 MED1Q15648 1581 aaPredicted RBP23.35■■□□□ 1.33
CTSB-219ENST00000530640 TET3O43151 1660 aa23.34■■□□□ 1.33
CTSB-219ENST00000530640 PIK3C2BO00750 1634 aa23.34■■□□□ 1.33
CTSB-219ENST00000530640 ALKQ9UM73 1620 aa23.33■■□□□ 1.33
CTSB-219ENST00000530640 SLC52A1Q9NWF4 448 aa23.33■■□□□ 1.33
CTSB-219ENST00000530640 STRCP1A6NGW2 1772 aa23.32■■□□□ 1.32
CTSB-219ENST00000530640 IDI1Q13907 227 aa23.31■■□□□ 1.32
CTSB-219ENST00000530640 RPRD2Q5VT52 1461 aaKnown RBP23.31■■□□□ 1.32
CTSB-219ENST00000530640 PHF23Q9BUL5 403 aaPredicted RBP23.3■■□□□ 1.32
CTSB-219ENST00000530640 NOS1P29475 1434 aa23.3■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms