RNA–Protein interactions for RNA: ENST00000530640.6

CTSB-219, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CTSB, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-219ENST00000530640 NISCHQ9Y2I1 1504 aa37.69■■■■□ 3.62
CTSB-219ENST00000530640 ABCC9O60706 1549 aa33.84■■■■□ 3.01
CTSB-219ENST00000530640 CCDC180Q9P1Z9 1646 aa33.83■■■■□ 3.01
CTSB-219ENST00000530640 RB1CC1Q8TDY2 1594 aa32.29■■■□□ 2.76
CTSB-219ENST00000530640 NACADO15069 1562 aa32.08■■■□□ 2.73
CTSB-219ENST00000530640 DNAJC5BQ9UF47 199 aa31.84■■■□□ 2.69
CTSB-219ENST00000530640 DCAF8L2P0C7V8 631 aa31.78■■■□□ 2.68
CTSB-219ENST00000530640 MYO15BQ96JP2 1530 aa31.68■■■□□ 2.66
CTSB-219ENST00000530640 PABPN1Q86U42 306 aaKnown RBP eCLIP31.5■■■□□ 2.63
CTSB-219ENST00000530640 UNC13AQ9UPW8 1703 aa31.36■■■□□ 2.61
CTSB-219ENST00000530640 ZCCHC6Q5VYS8 1495 aaKnown RBP31.35■■■□□ 2.61
CTSB-219ENST00000530640 BICRAQ9NZM4 1560 aa31.23■■■□□ 2.59
CTSB-219ENST00000530640 DCAF1Q9Y4B6 1507 aa31.18■■■□□ 2.58
CTSB-219ENST00000530640 SHROOM4Q9ULL8 1493 aa31.05■■■□□ 2.56
CTSB-219ENST00000530640 SCRIBQ14160 1630 aa30.73■■■□□ 2.51
CTSB-219ENST00000530640 CC2D2AQ9P2K1 1620 aa30.59■■■□□ 2.49
CTSB-219ENST00000530640 CECR2Q9BXF3 1484 aa30.58■■■□□ 2.49
CTSB-219ENST00000530640 EIF4G1Q04637 1599 aaKnown RBP30.53■■■□□ 2.48
CTSB-219ENST00000530640 NCAPD3P42695 1498 aa29.62■■■□□ 2.33
CTSB-219ENST00000530640 DNAJC5Q9H3Z4 198 aa29.5■■■□□ 2.31
CTSB-219ENST00000530640 ATAD2BQ9ULI0 1458 aa29.44■■■□□ 2.3
CTSB-219ENST00000530640 SMARCA2P51531 1590 aa29.4■■■□□ 2.3
CTSB-219ENST00000530640 CUX2O14529 1486 aa29.38■■■□□ 2.29
CTSB-219ENST00000530640 HMGXB3Q12766 1538 aa29.35■■■□□ 2.29
CTSB-219ENST00000530640 SMARCA4P51532 1647 aa29.34■■■□□ 2.29
CTSB-219ENST00000530640 ERCC6Q03468 1493 aa29.31■■■□□ 2.28
CTSB-219ENST00000530640 BAZ1AQ9NRL2 1556 aaPredicted RBP29.26■■■□□ 2.27
CTSB-219ENST00000530640 BAZ1BQ9UIG0 1483 aaKnown RBP29.15■■■□□ 2.26
CTSB-219ENST00000530640 PEG3Q9GZU2 1588 aa29.13■■■□□ 2.25
CTSB-219ENST00000530640 MROH2BQ7Z745 1585 aa29.04■■■□□ 2.24
CTSB-219ENST00000530640 NESP48681 1621 aa28.99■■■□□ 2.23
CTSB-219ENST00000530640 LAMC3Q9Y6N6 1575 aa28.94■■■□□ 2.22
CTSB-219ENST00000530640 PDS5BQ9NTI5 1447 aa28.84■■■□□ 2.21
CTSB-219ENST00000530640 THOC2Q8NI27 1593 aaKnown RBP28.76■■■□□ 2.2
CTSB-219ENST00000530640 WIZO95785 1651 aa28.73■■■□□ 2.19
CTSB-219ENST00000530640 CADPSQ9ULU8 1353 aa28.71■■■□□ 2.19
CTSB-219ENST00000530640 KIF21AQ7Z4S6 1674 aa28.61■■■□□ 2.17
CTSB-219ENST00000530640 RSF1Q96T23 1441 aaPredicted RBP28.57■■■□□ 2.16
CTSB-219ENST00000530640 MRC2Q9UBG0 1479 aa28.5■■■□□ 2.15
CTSB-219ENST00000530640 WDR62O43379 1518 aa28.43■■■□□ 2.14
CTSB-219ENST00000530640 TOP2AP11388 1531 aaKnown RBP28.42■■■□□ 2.14
CTSB-219ENST00000530640 CEP164Q9UPV0 1460 aa28.37■■■□□ 2.13
CTSB-219ENST00000530640 CFTRP13569 1480 aa28.33■■■□□ 2.13
CTSB-219ENST00000530640 FANCD2Q9BXW9 1451 aa28.31■■■□□ 2.12
CTSB-219ENST00000530640 OSCARQ8IYS5 282 aa28.06■■■□□ 2.08
CTSB-219ENST00000530640 CCDC88BA6NC98 1476 aa28.03■■■□□ 2.08
CTSB-219ENST00000530640 URB2Q14146 1524 aaKnown RBP28.03■■■□□ 2.08
CTSB-219ENST00000530640 TRIM41Q8WV44 630 aa28.02■■■□□ 2.08
CTSB-219ENST00000530640 PRDM2Q13029 1718 aa28■■■□□ 2.07
CTSB-219ENST00000530640 IFT140Q96RY7 1462 aa27.85■■■□□ 2.05
CTSB-219ENST00000530640 ABCC8Q09428 1581 aa27.85■■■□□ 2.05
CTSB-219ENST00000530640 SUPT5HO00267 1087 aaKnown RBP27.75■■■□□ 2.03
CTSB-219ENST00000530640 TOPBP1Q92547 1522 aa27.75■■■□□ 2.03
CTSB-219ENST00000530640 ZNF608Q9ULD9 1512 aaPredicted RBP27.68■■■□□ 2.02
CTSB-219ENST00000530640 DNMBPQ6XZF7 1577 aa27.65■■■□□ 2.02
CTSB-219ENST00000530640 EIF4G3O43432 1585 aaKnown RBP27.52■■■□□ 2
CTSB-219ENST00000530640 RIMBP3CA6NJZ7 1639 aa27.51■■□□□ 1.99
CTSB-219ENST00000530640 RIMBP3BA6NNM3 1639 aa27.51■■□□□ 1.99
CTSB-219ENST00000530640 RIMBP3Q9UFD9 1639 aa27.51■■□□□ 1.99
CTSB-219ENST00000530640 TARBP1Q13395 1621 aaKnown RBP27.47■■□□□ 1.99
CTSB-219ENST00000530640 ARHGEF11O15085 1522 aa27.46■■□□□ 1.99
CTSB-219ENST00000530640 AQRO60306 1485 aaKnown RBP eCLIP27.45■■□□□ 1.993e-7■■■■■ 33.7
CTSB-219ENST00000530640 POLA1P09884 1462 aaPredicted RBP27.45■■□□□ 1.99
CTSB-219ENST00000530640 SOGA1O94964 1423 aa27.38■■□□□ 1.97
CTSB-219ENST00000530640 WDR97A6NE52 1622 aa27.35■■□□□ 1.97
CTSB-219ENST00000530640 FBLN2P98095 1184 aa27.34■■□□□ 1.97
CTSB-219ENST00000530640 CYB5RLQ6IPT4 315 aa27.31■■□□□ 1.96
CTSB-219ENST00000530640 RAD54L2Q9Y4B4 1467 aa27.3■■□□□ 1.96
CTSB-219ENST00000530640 CHD1O14646 1710 aa27.3■■□□□ 1.96
CTSB-219ENST00000530640 TDRD9Q8NDG6 1382 aaKnown RBP27.27■■□□□ 1.96
CTSB-219ENST00000530640 CUX1P39880 1505 aa27.27■■□□□ 1.96
CTSB-219ENST00000530640 FGD5Q6ZNL6 1462 aa27.24■■□□□ 1.95
CTSB-219ENST00000530640 CHMP7Q8WUX9 453 aaPredicted RBP27.2■■□□□ 1.94
CTSB-219ENST00000530640 MAGI1Q96QZ7 1491 aaPredicted RBP27.2■■□□□ 1.94
CTSB-219ENST00000530640 GRIN2BQ13224 1484 aa27.16■■□□□ 1.94
CTSB-219ENST00000530640 SNAPC4Q5SXM2 1469 aa27.16■■□□□ 1.94
CTSB-219ENST00000530640 ARAP1Q96P48 1450 aa27.16■■□□□ 1.94
CTSB-219ENST00000530640 SYNJ1O43426 1573 aa27.11■■□□□ 1.93
CTSB-219ENST00000530640 SYNJ2O15056 1496 aa27.08■■□□□ 1.93
CTSB-219ENST00000530640 CLASP1Q7Z460 1538 aa27.07■■□□□ 1.92
CTSB-219ENST00000530640 TRHP20396 242 aaPredicted RBP27.05■■□□□ 1.92
CTSB-219ENST00000530640 GAPVD1Q14C86 1478 aa27.03■■□□□ 1.92
CTSB-219ENST00000530640 ABCA10Q8WWZ4 1543 aa27■■□□□ 1.91
CTSB-219ENST00000530640 BIVM-ERCC5R4GMW8 1640 aa26.98■■□□□ 1.91
CTSB-219ENST00000530640 WRNQ14191 1432 aaPredicted RBP eCLIP26.97■■□□□ 1.91
CTSB-219ENST00000530640 TOP2BQ02880 1626 aa26.96■■□□□ 1.91
CTSB-219ENST00000530640 PBRM1Q86U86 1689 aa26.93■■□□□ 1.9
CTSB-219ENST00000530640 ABCA5Q8WWZ7 1642 aa26.9■■□□□ 1.9
CTSB-219ENST00000530640 GRIN2AQ12879 1464 aa26.77■■□□□ 1.88
CTSB-219ENST00000530640 FHAD1B1AJZ9 1412 aa26.72■■□□□ 1.87
CTSB-219ENST00000530640 NUP160Q12769 1436 aa26.72■■□□□ 1.87
CTSB-219ENST00000530640 ADAMTS12P58397 1594 aa26.69■■□□□ 1.86
CTSB-219ENST00000530640 ERICH3Q5RHP9 1530 aa26.68■■□□□ 1.86
CTSB-219ENST00000530640 CEP170Q5SW79 1584 aa26.6■■□□□ 1.85
CTSB-219ENST00000530640 SHROOM2Q13796 1616 aa26.56■■□□□ 1.84
CTSB-219ENST00000530640 ERCC6L2Q5T890 1561 aa26.52■■□□□ 1.84
CTSB-219ENST00000530640 JPH4Q96JJ6 628 aa26.49■■□□□ 1.83
CTSB-219ENST00000530640 PRG4Q92954 1404 aaPredicted RBP26.45■■□□□ 1.82
CTSB-219ENST00000530640 KIF27Q86VH2 1401 aa26.43■■□□□ 1.82
CTSB-219ENST00000530640 AEBP2Q6ZN18 517 aaPredicted RBP26.41■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms