RNA–Protein interactions for RNA: ENST00000530339.1

PCDHA4-203, Transcript of protocadherin alpha 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA4, Length 5,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-203ENST00000530339 CLUAP1Q96AJ1 413 aa19.31■□□□□ 0.68
PCDHA4-203ENST00000530339 CCDC146Q8IYE0 955 aa19.29■□□□□ 0.68
PCDHA4-203ENST00000530339 SLC4A3P48751 1232 aa19.29■□□□□ 0.68
PCDHA4-203ENST00000530339 STAC3Q96MF2 364 aa19.29■□□□□ 0.68
PCDHA4-203ENST00000530339 ST20-MTHFSA0A0A6YYL1 179 aa19.28■□□□□ 0.68
PCDHA4-203ENST00000530339 KIF3BO15066 747 aa19.28■□□□□ 0.68
PCDHA4-203ENST00000530339 SAFB2Q14151 953 aaKnown RBP eCLIP19.28■□□□□ 0.68
PCDHA4-203ENST00000530339 HSP90AA2PQ14568 343 aaPredicted RBP19.28■□□□□ 0.68
PCDHA4-203ENST00000530339 HNRNPMP52272 730 aaKnown RBP eCLIP19.27■□□□□ 0.68
PCDHA4-203ENST00000530339 STK31Q9BXU1 1019 aa19.27■□□□□ 0.68
PCDHA4-203ENST00000530339 STK26Q9P289 416 aa19.27■□□□□ 0.68
PCDHA4-203ENST00000530339 PLIN1O60240 522 aa19.26■□□□□ 0.67
PCDHA4-203ENST00000530339 JPH4Q96JJ6 628 aa19.26■□□□□ 0.67
PCDHA4-203ENST00000530339 CRBNQ96SW2 442 aa19.26■□□□□ 0.67
PCDHA4-203ENST00000530339 TMX4Q9H1E5 349 aaPredicted RBP19.26■□□□□ 0.67
PCDHA4-203ENST00000530339 MYOM3Q5VTT5 1437 aa19.25■□□□□ 0.67
PCDHA4-203ENST00000530339 EID1Q9Y6B2 187 aa19.24■□□□□ 0.67
PCDHA4-203ENST00000530339 ARID3AQ99856 593 aa19.24■□□□□ 0.67
PCDHA4-203ENST00000530339 TAOK2Q9UL54 1235 aa19.24■□□□□ 0.67
PCDHA4-203ENST00000530339 GPATCH3Q96I76 525 aa19.24■□□□□ 0.67
PCDHA4-203ENST00000530339 CGNL1Q0VF96 1302 aa19.23■□□□□ 0.67
PCDHA4-203ENST00000530339 CSPP1Q1MSJ5 1256 aa19.22■□□□□ 0.67
PCDHA4-203ENST00000530339 USP47Q96K76 1375 aa19.22■□□□□ 0.67
PCDHA4-203ENST00000530339 PANK3Q9H999 370 aa19.22■□□□□ 0.67
PCDHA4-203ENST00000530339 CSB-PGBD3P0DP91 1061 aa19.21■□□□□ 0.67
PCDHA4-203ENST00000530339 E9PSI1 815 aa19.21■□□□□ 0.67
PCDHA4-203ENST00000530339 SKOR2Q2VWA4 1001 aaPredicted RBP19.21■□□□□ 0.67
PCDHA4-203ENST00000530339 FOXD4L1Q9NU39 408 aa19.2■□□□□ 0.66
PCDHA4-203ENST00000530339 ST18O60284 1047 aa19.19■□□□□ 0.66
PCDHA4-203ENST00000530339 WASHC2CQ9Y4E1 1318 aa19.19■□□□□ 0.66
PCDHA4-203ENST00000530339 KIF21BO75037 1637 aa19.19■□□□□ 0.66
PCDHA4-203ENST00000530339 ERICH3Q5RHP9 1530 aa19.18■□□□□ 0.66
PCDHA4-203ENST00000530339 FGD6Q6ZV73 1430 aa19.17■□□□□ 0.66
PCDHA4-203ENST00000530339 PHF14O94880 888 aa19.17■□□□□ 0.66
PCDHA4-203ENST00000530339 IGF1RP08069 1367 aa19.17■□□□□ 0.66
PCDHA4-203ENST00000530339 SOX12O15370 315 aa19.17■□□□□ 0.66
PCDHA4-203ENST00000530339 DDX49Q9Y6V7 483 aaKnown RBP19.16■□□□□ 0.66
PCDHA4-203ENST00000530339 PTPRGP23470 1445 aa19.16■□□□□ 0.66
PCDHA4-203ENST00000530339 CCDC7Q96M83 1385 aa19.15■□□□□ 0.66
PCDHA4-203ENST00000530339 FGD5Q6ZNL6 1462 aa19.15■□□□□ 0.66
PCDHA4-203ENST00000530339 GAPVD1Q14C86 1478 aa19.15■□□□□ 0.66
PCDHA4-203ENST00000530339 MIA2Q96PC5 1412 aa19.15■□□□□ 0.66
PCDHA4-203ENST00000530339 VGFO15240 615 aaPredicted RBP19.15■□□□□ 0.66
PCDHA4-203ENST00000530339 PAK3O75914 559 aaPredicted RBP19.14■□□□□ 0.66
PCDHA4-203ENST00000530339 CNTLNQ9NXG0 1405 aa19.14■□□□□ 0.65
PCDHA4-203ENST00000530339 EVC2Q86UK5 1308 aa19.13■□□□□ 0.65
PCDHA4-203ENST00000530339 AAMPQ13685 434 aa19.13■□□□□ 0.65
PCDHA4-203ENST00000530339 CCDC34Q96HJ3 373 aa19.13■□□□□ 0.65
PCDHA4-203ENST00000530339 CCDC9Q9Y3X0 531 aaKnown RBP19.13■□□□□ 0.65
PCDHA4-203ENST00000530339 GNL2Q13823 731 aaKnown RBP19.13■□□□□ 0.65
PCDHA4-203ENST00000530339 COG6Q9Y2V7 657 aa19.13■□□□□ 0.65
PCDHA4-203ENST00000530339 ZKSCAN2Q63HK3 967 aa19.13■□□□□ 0.65
PCDHA4-203ENST00000530339 TULP1O00294 542 aaPredicted RBP19.12■□□□□ 0.65
PCDHA4-203ENST00000530339 CHMP4CQ96CF2 233 aa19.12■□□□□ 0.65
PCDHA4-203ENST00000530339 FYCO1Q9BQS8 1478 aa19.12■□□□□ 0.65
PCDHA4-203ENST00000530339 TRIM6-TRIM34B2RNG4 842 aa19.12■□□□□ 0.65
PCDHA4-203ENST00000530339 TPM4P67936 248 aa19.11■□□□□ 0.65
PCDHA4-203ENST00000530339 CASKIN1Q8WXD9 1431 aa19.11■□□□□ 0.65
PCDHA4-203ENST00000530339 LRRC9Q6ZRR7 1453 aa19.11■□□□□ 0.65
PCDHA4-203ENST00000530339 VSIG10Q8N0Z9 540 aa19.1■□□□□ 0.65
PCDHA4-203ENST00000530339 RRP7AQ9Y3A4 280 aaKnown RBP19.1■□□□□ 0.65
PCDHA4-203ENST00000530339 KIF7Q2M1P5 1343 aa19.1■□□□□ 0.65
PCDHA4-203ENST00000530339 CHMP5Q9NZZ3 219 aa19.1■□□□□ 0.65
PCDHA4-203ENST00000530339 NCAPD3P42695 1498 aa19.1■□□□□ 0.65
PCDHA4-203ENST00000530339 NFKBIBQ15653 356 aa19.1■□□□□ 0.65
PCDHA4-203ENST00000530339 BCL2L13Q9BXK5 485 aa19.09■□□□□ 0.65
PCDHA4-203ENST00000530339 KIF3AQ9Y496 699 aa19.09■□□□□ 0.65
PCDHA4-203ENST00000530339 APAF1O14727 1248 aa19.08■□□□□ 0.64
PCDHA4-203ENST00000530339 AMER1Q5JTC6 1135 aaPredicted RBP19.08■□□□□ 0.64
PCDHA4-203ENST00000530339 NOL8Q76FK4 1167 aaKnown RBP19.06■□□□□ 0.64
PCDHA4-203ENST00000530339 ANKRD45Q5TZF3 282 aa19.06■□□□□ 0.64
PCDHA4-203ENST00000530339 WASHC2AQ641Q2 1341 aa19.04■□□□□ 0.64
PCDHA4-203ENST00000530339 ISY1Q9ULR0 285 aaKnown RBP19.04■□□□□ 0.64
PCDHA4-203ENST00000530339 SLC4A10Q6U841 1118 aa19.03■□□□□ 0.64
PCDHA4-203ENST00000530339 NGDNQ8NEJ9 315 aaKnown RBP19.03■□□□□ 0.64
PCDHA4-203ENST00000530339 AMPHP49418 695 aa19.03■□□□□ 0.64
PCDHA4-203ENST00000530339 TRAK1Q9UPV9 953 aa19.03■□□□□ 0.64
PCDHA4-203ENST00000530339 DDX19BQ9UMR2 479 aa19.03■□□□□ 0.64
PCDHA4-203ENST00000530339 RRBP1Q9P2E9 1410 aaKnown RBP19.03■□□□□ 0.64
PCDHA4-203ENST00000530339 EFCAB5A4FU69 1503 aa19.02■□□□□ 0.64
PCDHA4-203ENST00000530339 KIF16BQ96L93 1317 aa19.02■□□□□ 0.64
PCDHA4-203ENST00000530339 FOXD4L5Q5VV16 416 aaPredicted RBP19.02■□□□□ 0.64
PCDHA4-203ENST00000530339 FOXD4L4Q8WXT5 416 aaPredicted RBP19.02■□□□□ 0.64
PCDHA4-203ENST00000530339 ROCK1Q13464 1354 aa19.02■□□□□ 0.63
PCDHA4-203ENST00000530339 TNNT3P45378 269 aaPredicted RBP19.02■□□□□ 0.63
PCDHA4-203ENST00000530339 ATP6V1DQ9Y5K8 247 aa19.01■□□□□ 0.63
PCDHA4-203ENST00000530339 COG3Q96JB2 828 aa19.01■□□□□ 0.63
PCDHA4-203ENST00000530339 GORABQ5T7V8 394 aa19■□□□□ 0.63
PCDHA4-203ENST00000530339 BRD4O60885 1362 aaPredicted RBP18.99■□□□□ 0.63
PCDHA4-203ENST00000530339 AEBP2Q6ZN18 517 aaPredicted RBP18.99■□□□□ 0.63
PCDHA4-203ENST00000530339 NCOA2Q15596 1464 aa18.98■□□□□ 0.63
PCDHA4-203ENST00000530339 DZIP1LQ8IYY4 767 aaKnown RBP18.98■□□□□ 0.63
PCDHA4-203ENST00000530339 FAM43AQ8N2R8 423 aa18.97■□□□□ 0.63
PCDHA4-203ENST00000530339 API5Q9BZZ5 524 aaKnown RBP18.97■□□□□ 0.63
PCDHA4-203ENST00000530339 ZNF330Q9Y3S2 320 aaPredicted RBP18.97■□□□□ 0.63
PCDHA4-203ENST00000530339 HSP90B1P14625 803 aaKnown RBP18.97■□□□□ 0.63
PCDHA4-203ENST00000530339 REC8O95072 547 aa18.96■□□□□ 0.63
PCDHA4-203ENST00000530339 ANKRD50Q9ULJ7 1429 aa18.96■□□□□ 0.63
PCDHA4-203ENST00000530339 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.96■□□□□ 0.63
PCDHA4-203ENST00000530339 G3V3G9 751 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms