RNA–Protein interactions for RNA: ENST00000526866.5

CDC27-203, Transcript of cell division cycle 27, humanhuman

TSL 2

Gene CDC27, Length 1,420 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-203ENST00000526866 KDM5DQ9BY66 1539 aa29.53■■■□□ 2.32
CDC27-203ENST00000526866 FBXO31Q5XUX0 539 aaPredicted RBP29.52■■■□□ 2.32
CDC27-203ENST00000526866 ARHGEF5Q12774 1597 aa29.52■■■□□ 2.32
CDC27-203ENST00000526866 FAM135AQ9P2D6 1515 aa29.5■■■□□ 2.31
CDC27-203ENST00000526866 PZPP20742 1482 aa29.5■■■□□ 2.31
CDC27-203ENST00000526866 TNRQ92752 1358 aa29.49■■■□□ 2.31
CDC27-203ENST00000526866 ILDR2Q71H61 639 aa29.48■■■□□ 2.31
CDC27-203ENST00000526866 WASHC2CQ9Y4E1 1318 aa29.47■■■□□ 2.31
CDC27-203ENST00000526866 VPS8Q8N3P4 1428 aa29.46■■■□□ 2.31
CDC27-203ENST00000526866 LRRC9Q6ZRR7 1453 aa29.46■■■□□ 2.31
CDC27-203ENST00000526866 TSPY4P0CV99 314 aa29.45■■■□□ 2.31
CDC27-203ENST00000526866 TSPY10P0CW01 314 aa29.45■■■□□ 2.31
CDC27-203ENST00000526866 SPATA31D1Q6ZQQ2 1576 aa29.45■■■□□ 2.31
CDC27-203ENST00000526866 POLR1AO95602 1720 aaPredicted RBP29.45■■■□□ 2.3
CDC27-203ENST00000526866 UBAP1LF5GYI3 381 aa29.44■■■□□ 2.3
CDC27-203ENST00000526866 NEURL4Q96JN8 1562 aa29.42■■■□□ 2.3
CDC27-203ENST00000526866 LOC105371045A0A1W2PR82 267 aa29.42■■■□□ 2.3
CDC27-203ENST00000526866 MAST1Q9Y2H9 1570 aa29.39■■■□□ 2.29
CDC27-203ENST00000526866 MIA2Q96PC5 1412 aa29.38■■■□□ 2.29
CDC27-203ENST00000526866 RNF17Q9BXT8 1623 aaKnown RBP29.37■■■□□ 2.29
CDC27-203ENST00000526866 KANK4Q5T7N3 995 aaPredicted RBP29.36■■■□□ 2.29
CDC27-203ENST00000526866 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.35■■■□□ 2.29
CDC27-203ENST00000526866 NLRP1Q9C000 1473 aa29.34■■■□□ 2.29
CDC27-203ENST00000526866 UGGT1Q9NYU2 1555 aa29.33■■■□□ 2.29
CDC27-203ENST00000526866 MAP3K1Q13233 1512 aa29.32■■■□□ 2.28
CDC27-203ENST00000526866 ABCC3O15438 1527 aa29.32■■■□□ 2.28
CDC27-203ENST00000526866 ZC3H13Q5T200 1668 aaKnown RBP29.31■■■□□ 2.28
CDC27-203ENST00000526866 ANKLE2Q86XL3 938 aa29.31■■■□□ 2.28
CDC27-203ENST00000526866 THEMISQ8N1K5 641 aaPredicted RBP29.31■■■□□ 2.28
CDC27-203ENST00000526866 EIF2AK4Q9P2K8 1649 aaKnown RBP29.31■■■□□ 2.28
CDC27-203ENST00000526866 MYOM3Q5VTT5 1437 aa29.3■■■□□ 2.28
CDC27-203ENST00000526866 SHANK2Q9UPX8 1470 aa29.3■■■□□ 2.28
CDC27-203ENST00000526866 CPS1P31327 1500 aa29.29■■■□□ 2.28
CDC27-203ENST00000526866 SOCS7O14512 581 aa29.29■■■□□ 2.28
CDC27-203ENST00000526866 MROH1Q8NDA8 1641 aa29.27■■■□□ 2.28
CDC27-203ENST00000526866 DEPDC5O75140 1603 aa29.26■■■□□ 2.27
CDC27-203ENST00000526866 NPHP4O75161 1426 aaPredicted RBP29.25■■■□□ 2.27
CDC27-203ENST00000526866 MED14O60244 1454 aa29.25■■■□□ 2.27
CDC27-203ENST00000526866 VWDEQ8N2E2 1590 aa29.25■■■□□ 2.27
CDC27-203ENST00000526866 CEP152O94986 1710 aa29.24■■■□□ 2.27
CDC27-203ENST00000526866 ERVK-7P63135 1459 aa29.23■■■□□ 2.27
CDC27-203ENST00000526866 DUOX2Q9NRD8 1548 aa29.2■■■□□ 2.27
CDC27-203ENST00000526866 IQGAP1P46940 1657 aa29.2■■■□□ 2.26
CDC27-203ENST00000526866 SCAF1Q9H7N4 1312 aaKnown RBP29.2■■■□□ 2.26
CDC27-203ENST00000526866 CFAP65Q6ZU64 1925 aaKnown RBP29.19■■■□□ 2.26
CDC27-203ENST00000526866 PIP4K2BP78356 416 aa29.19■■■□□ 2.26
CDC27-203ENST00000526866 TOM1O60784 492 aa29.18■■■□□ 2.26
CDC27-203ENST00000526866 HSPA1LP34931 641 aa29.15■■■□□ 2.26
CDC27-203ENST00000526866 CROCC2H7BZ55 1655 aa29.15■■■□□ 2.26
CDC27-203ENST00000526866 UBR1Q8IWV7 1749 aa29.14■■■□□ 2.26
CDC27-203ENST00000526866 KIF15Q9NS87 1388 aa29.13■■■□□ 2.25
CDC27-203ENST00000526866 ABCC5O15440 1437 aa29.12■■■□□ 2.25
CDC27-203ENST00000526866 STRCP1A6NGW2 1772 aa29.12■■■□□ 2.25
CDC27-203ENST00000526866 PTPN23Q9H3S7 1636 aa29.12■■■□□ 2.25
CDC27-203ENST00000526866 PRDM15P57071 1507 aaPredicted RBP29.11■■■□□ 2.25
CDC27-203ENST00000526866 ERBINQ96RT1 1412 aa29.09■■■□□ 2.25
CDC27-203ENST00000526866 ALKQ9UM73 1620 aa29.09■■■□□ 2.25
CDC27-203ENST00000526866 RRP7BPQ9NSQ0 103 aa29.09■■■□□ 2.25
CDC27-203ENST00000526866 ARHGAP31Q2M1Z3 1444 aa29.07■■■□□ 2.24
CDC27-203ENST00000526866 DAPK1P53355 1430 aa29.05■■■□□ 2.24
CDC27-203ENST00000526866 APLP2Q06481 763 aa29.05■■■□□ 2.24
CDC27-203ENST00000526866 LRRC7Q96NW7 1537 aa29.05■■■□□ 2.24
CDC27-203ENST00000526866 SCAF11Q99590 1463 aaKnown RBP29.04■■■□□ 2.24
CDC27-203ENST00000526866 MED1Q15648 1581 aaPredicted RBP29.03■■■□□ 2.24
CDC27-203ENST00000526866 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.03■■■□□ 2.241e-6■■□□□ 12.2
CDC27-203ENST00000526866 SYNMO15061 1565 aa29.02■■■□□ 2.24
CDC27-203ENST00000526866 ARHGAP23Q9P227 1491 aa29.02■■■□□ 2.24
CDC27-203ENST00000526866 FGD6Q6ZV73 1430 aa29.01■■■□□ 2.23
CDC27-203ENST00000526866 SLIT1O75093 1534 aa29.01■■■□□ 2.23
CDC27-203ENST00000526866 LTKP29376 864 aa29■■■□□ 2.23
CDC27-203ENST00000526866 TXNDC2Q86VQ3 553 aa28.98■■■□□ 2.23
CDC27-203ENST00000526866 PIK3C2BO00750 1634 aa28.98■■■□□ 2.23
CDC27-203ENST00000526866 CHIC2Q9UKJ5 165 aa28.96■■■□□ 2.23
CDC27-203ENST00000526866 KANK1Q14678 1352 aa28.96■■■□□ 2.23
CDC27-203ENST00000526866 ANKRD30AQ9BXX3 1397 aa28.93■■■□□ 2.22
CDC27-203ENST00000526866 LMTK2Q8IWU2 1503 aa28.92■■■□□ 2.22
CDC27-203ENST00000526866 EID1Q9Y6B2 187 aa28.91■■■□□ 2.22
CDC27-203ENST00000526866 SENP3Q9H4L4 574 aaPredicted RBP28.9■■■□□ 2.22
CDC27-203ENST00000526866 TMEM2Q9UHN6 1383 aa28.9■■■□□ 2.22
CDC27-203ENST00000526866 XIRP1Q702N8 1843 aaKnown RBP28.89■■■□□ 2.21
CDC27-203ENST00000526866 STAG3Q9UJ98 1225 aa28.88■■■□□ 2.21
CDC27-203ENST00000526866 KDM5AP29375 1690 aaKnown RBP28.87■■■□□ 2.21
CDC27-203ENST00000526866 EFCAB6Q5THR3 1501 aa28.87■■■□□ 2.21
CDC27-203ENST00000526866 IDI1Q13907 227 aa28.86■■■□□ 2.21
CDC27-203ENST00000526866 ADGRL2O95490 1459 aa28.83■■■□□ 2.21
CDC27-203ENST00000526866 NOS1P29475 1434 aa28.82■■■□□ 2.2
CDC27-203ENST00000526866 PHF23Q9BUL5 403 aaPredicted RBP28.79■■■□□ 2.2
CDC27-203ENST00000526866 ADGRB3O60242 1522 aa28.78■■■□□ 2.2
CDC27-203ENST00000526866 FAM50AQ14320 339 aaKnown RBP28.77■■■□□ 2.2
CDC27-203ENST00000526866 TET3O43151 1660 aa28.77■■■□□ 2.2
CDC27-203ENST00000526866 SLC26A8Q96RN1 970 aa28.74■■■□□ 2.19
CDC27-203ENST00000526866 ANKRD50Q9ULJ7 1429 aa28.73■■■□□ 2.19
CDC27-203ENST00000526866 TMEM94Q12767 1356 aa28.73■■■□□ 2.19
CDC27-203ENST00000526866 KCNA6P17658 529 aa28.72■■■□□ 2.19
CDC27-203ENST00000526866 SLC52A1Q9NWF4 448 aa28.72■■■□□ 2.19
CDC27-203ENST00000526866 RPRD2Q5VT52 1461 aaKnown RBP28.69■■■□□ 2.18
CDC27-203ENST00000526866 FAM135BQ49AJ0 1406 aa28.68■■■□□ 2.18
CDC27-203ENST00000526866 MYO5BQ9ULV0 1848 aa28.67■■■□□ 2.18
CDC27-203ENST00000526866 PROSER2Q86WR7 435 aaPredicted RBP28.67■■■□□ 2.18
CDC27-203ENST00000526866 RBM33Q96EV2 1170 aaKnown RBP28.67■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms