RNA–Protein interactions for RNA: ENST00000526866.5

CDC27-203, Transcript of cell division cycle 27, humanhuman

TSL 2

Gene CDC27, Length 1,420 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-203ENST00000526866 NISCHQ9Y2I1 1504 aa46.68■■■■■ 5.06
CDC27-203ENST00000526866 ABCC9O60706 1549 aa42.1■■■■■ 4.33
CDC27-203ENST00000526866 CCDC180Q9P1Z9 1646 aa41.95■■■■■ 4.31
CDC27-203ENST00000526866 RB1CC1Q8TDY2 1594 aa39.99■■■■□ 3.99
CDC27-203ENST00000526866 NACADO15069 1562 aa39.68■■■■□ 3.94
CDC27-203ENST00000526866 DNAJC5BQ9UF47 199 aa39.63■■■■□ 3.93
CDC27-203ENST00000526866 DCAF8L2P0C7V8 631 aa39.46■■■■□ 3.91
CDC27-203ENST00000526866 PABPN1Q86U42 306 aaKnown RBP eCLIP39.16■■■■□ 3.86
CDC27-203ENST00000526866 UNC13AQ9UPW8 1703 aa39.14■■■■□ 3.86
CDC27-203ENST00000526866 MYO15BQ96JP2 1530 aa39.07■■■■□ 3.85
CDC27-203ENST00000526866 BICRAQ9NZM4 1560 aa38.86■■■■□ 3.81
CDC27-203ENST00000526866 ZCCHC6Q5VYS8 1495 aaKnown RBP38.66■■■■□ 3.78
CDC27-203ENST00000526866 DCAF1Q9Y4B6 1507 aa38.53■■■■□ 3.76
CDC27-203ENST00000526866 SHROOM4Q9ULL8 1493 aa38.26■■■■□ 3.72
CDC27-203ENST00000526866 SCRIBQ14160 1630 aa38.24■■■■□ 3.71
CDC27-203ENST00000526866 CC2D2AQ9P2K1 1620 aa38.03■■■■□ 3.68
CDC27-203ENST00000526866 CECR2Q9BXF3 1484 aa37.92■■■■□ 3.66
CDC27-203ENST00000526866 EIF4G1Q04637 1599 aaKnown RBP37.9■■■■□ 3.66
CDC27-203ENST00000526866 NCAPD3P42695 1498 aa36.63■■■■□ 3.45
CDC27-203ENST00000526866 ATAD2BQ9ULI0 1458 aa36.51■■■■□ 3.44
CDC27-203ENST00000526866 DNAJC5Q9H3Z4 198 aa36.45■■■■□ 3.43
CDC27-203ENST00000526866 SMARCA4P51532 1647 aa36.45■■■■□ 3.43
CDC27-203ENST00000526866 SMARCA2P51531 1590 aa36.39■■■■□ 3.42
CDC27-203ENST00000526866 HMGXB3Q12766 1538 aa36.35■■■■□ 3.41
CDC27-203ENST00000526866 ERCC6Q03468 1493 aa36.33■■■■□ 3.41
CDC27-203ENST00000526866 CUX2O14529 1486 aa36.31■■■■□ 3.4
CDC27-203ENST00000526866 BAZ1AQ9NRL2 1556 aaPredicted RBP36.24■■■■□ 3.39
CDC27-203ENST00000526866 BAZ1BQ9UIG0 1483 aaKnown RBP36.15■■■■□ 3.38
CDC27-203ENST00000526866 NESP48681 1621 aa36.14■■■■□ 3.38
CDC27-203ENST00000526866 PEG3Q9GZU2 1588 aa36.09■■■■□ 3.37
CDC27-203ENST00000526866 MROH2BQ7Z745 1585 aa35.98■■■■□ 3.35
CDC27-203ENST00000526866 LAMC3Q9Y6N6 1575 aa35.83■■■■□ 3.33
CDC27-203ENST00000526866 THOC2Q8NI27 1593 aaKnown RBP35.8■■■■□ 3.32
CDC27-203ENST00000526866 KIF21AQ7Z4S6 1674 aa35.68■■■■□ 3.3
CDC27-203ENST00000526866 PDS5BQ9NTI5 1447 aa35.62■■■■□ 3.29
CDC27-203ENST00000526866 WIZO95785 1651 aa35.56■■■■□ 3.28
CDC27-203ENST00000526866 CADPSQ9ULU8 1353 aa35.51■■■■□ 3.28
CDC27-203ENST00000526866 MRC2Q9UBG0 1479 aa35.34■■■■□ 3.25
CDC27-203ENST00000526866 WDR62O43379 1518 aa35.26■■■■□ 3.23
CDC27-203ENST00000526866 RSF1Q96T23 1441 aaPredicted RBP35.17■■■■□ 3.22
CDC27-203ENST00000526866 CEP164Q9UPV0 1460 aa35.17■■■■□ 3.22
CDC27-203ENST00000526866 FANCD2Q9BXW9 1451 aa35.12■■■■□ 3.21
CDC27-203ENST00000526866 CFTRP13569 1480 aa35.08■■■■□ 3.21
CDC27-203ENST00000526866 TOP2AP11388 1531 aaKnown RBP35.07■■■■□ 3.2
CDC27-203ENST00000526866 URB2Q14146 1524 aaKnown RBP34.85■■■■□ 3.17
CDC27-203ENST00000526866 TRIM41Q8WV44 630 aa34.81■■■■□ 3.16
CDC27-203ENST00000526866 PRDM2Q13029 1718 aa34.75■■■■□ 3.15
CDC27-203ENST00000526866 CCDC88BA6NC98 1476 aa34.68■■■■□ 3.14
CDC27-203ENST00000526866 OSCARQ8IYS5 282 aa34.63■■■■□ 3.13
CDC27-203ENST00000526866 IFT140Q96RY7 1462 aa34.46■■■■□ 3.11
CDC27-203ENST00000526866 TOPBP1Q92547 1522 aa34.45■■■■□ 3.11
CDC27-203ENST00000526866 ZNF608Q9ULD9 1512 aaPredicted RBP34.45■■■■□ 3.11
CDC27-203ENST00000526866 ABCC8Q09428 1581 aa34.33■■■■□ 3.09
CDC27-203ENST00000526866 DNMBPQ6XZF7 1577 aa34.3■■■■□ 3.08
CDC27-203ENST00000526866 EIF4G3O43432 1585 aaKnown RBP34.25■■■■□ 3.07
CDC27-203ENST00000526866 RIMBP3CA6NJZ7 1639 aa34.23■■■■□ 3.07
CDC27-203ENST00000526866 RIMBP3BA6NNM3 1639 aa34.23■■■■□ 3.07
CDC27-203ENST00000526866 RIMBP3Q9UFD9 1639 aa34.23■■■■□ 3.07
CDC27-203ENST00000526866 TARBP1Q13395 1621 aaKnown RBP34.16■■■■□ 3.06
CDC27-203ENST00000526866 AQRO60306 1485 aaKnown RBP eCLIP34.12■■■■□ 3.051e-7■■■■□ 23.9
CDC27-203ENST00000526866 ARHGEF11O15085 1522 aa34.1■■■■□ 3.05
CDC27-203ENST00000526866 POLA1P09884 1462 aaPredicted RBP34.08■■■■□ 3.05
CDC27-203ENST00000526866 CHD1O14646 1710 aa34.04■■■■□ 3.04
CDC27-203ENST00000526866 RAD54L2Q9Y4B4 1467 aa33.98■■■■□ 3.03
CDC27-203ENST00000526866 SOGA1O94964 1423 aa33.92■■■■□ 3.02
CDC27-203ENST00000526866 FBLN2P98095 1184 aa33.9■■■■□ 3.02
CDC27-203ENST00000526866 TDRD9Q8NDG6 1382 aaKnown RBP33.88■■■■□ 3.01
CDC27-203ENST00000526866 FGD5Q6ZNL6 1462 aa33.86■■■■□ 3.01
CDC27-203ENST00000526866 CYB5RLQ6IPT4 315 aa33.84■■■■□ 3.01
CDC27-203ENST00000526866 CUX1P39880 1505 aa33.81■■■■□ 3
CDC27-203ENST00000526866 WDR97A6NE52 1622 aa33.77■■■■□ 3
CDC27-203ENST00000526866 SNAPC4Q5SXM2 1469 aa33.76■■■□□ 2.99
CDC27-203ENST00000526866 ARAP1Q96P48 1450 aa33.76■■■□□ 2.99
CDC27-203ENST00000526866 MAGI1Q96QZ7 1491 aaPredicted RBP33.64■■■□□ 2.98
CDC27-203ENST00000526866 GRIN2BQ13224 1484 aa33.64■■■□□ 2.98
CDC27-203ENST00000526866 CLASP1Q7Z460 1538 aa33.63■■■□□ 2.97
CDC27-203ENST00000526866 CHMP7Q8WUX9 453 aaPredicted RBP33.62■■■□□ 2.97
CDC27-203ENST00000526866 SYNJ1O43426 1573 aa33.58■■■□□ 2.97
CDC27-203ENST00000526866 SYNJ2O15056 1496 aa33.54■■■□□ 2.96
CDC27-203ENST00000526866 PBRM1Q86U86 1689 aa33.53■■■□□ 2.96
CDC27-203ENST00000526866 SUPT5HO00267 1087 aaKnown RBP33.52■■■□□ 2.96
CDC27-203ENST00000526866 TRHP20396 242 aaPredicted RBP33.51■■■□□ 2.95
CDC27-203ENST00000526866 GAPVD1Q14C86 1478 aa33.5■■■□□ 2.95
CDC27-203ENST00000526866 ABCA10Q8WWZ4 1543 aa33.45■■■□□ 2.95
CDC27-203ENST00000526866 ABCA5Q8WWZ7 1642 aa33.43■■■□□ 2.94
CDC27-203ENST00000526866 WRNQ14191 1432 aaPredicted RBP eCLIP33.27■■■□□ 2.92
CDC27-203ENST00000526866 BIVM-ERCC5R4GMW8 1640 aa33.23■■■□□ 2.91
CDC27-203ENST00000526866 TOP2BQ02880 1626 aa33.22■■■□□ 2.91
CDC27-203ENST00000526866 GRIN2AQ12879 1464 aa33.21■■■□□ 2.91
CDC27-203ENST00000526866 ADAMTS12P58397 1594 aa33.19■■■□□ 2.9
CDC27-203ENST00000526866 CEP170Q5SW79 1584 aa33.12■■■□□ 2.89
CDC27-203ENST00000526866 ERCC6L2Q5T890 1561 aa33.12■■■□□ 2.89
CDC27-203ENST00000526866 NUP160Q12769 1436 aa33.1■■■□□ 2.89
CDC27-203ENST00000526866 FHAD1B1AJZ9 1412 aa33.06■■■□□ 2.88
CDC27-203ENST00000526866 ERICH3Q5RHP9 1530 aa33.03■■■□□ 2.88
CDC27-203ENST00000526866 SHROOM2Q13796 1616 aa32.99■■■□□ 2.87
CDC27-203ENST00000526866 PRG4Q92954 1404 aaPredicted RBP32.8■■■□□ 2.84
CDC27-203ENST00000526866 JPH4Q96JJ6 628 aa32.76■■■□□ 2.83
CDC27-203ENST00000526866 RUSC2Q8N2Y8 1516 aa32.73■■■□□ 2.83
CDC27-203ENST00000526866 KIF13AQ9H1H9 1805 aa32.64■■■□□ 2.82
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms