RNA–Protein interactions for RNA: ENST00000525045.5

PABPC4-219, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 2

Gene PABPC4, Length 765 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-219ENST00000525045 TSPY10P0CW01 314 aa22.53■■□□□ 1.2
PABPC4-219ENST00000525045 CCDC141Q6ZP82 1450 aa22.52■■□□□ 1.2
PABPC4-219ENST00000525045 WASHC2CQ9Y4E1 1318 aa22.52■■□□□ 1.2
PABPC4-219ENST00000525045 FAM135AQ9P2D6 1515 aa22.52■■□□□ 1.19
PABPC4-219ENST00000525045 TNRQ92752 1358 aa22.5■■□□□ 1.19
PABPC4-219ENST00000525045 SPATA31D1Q6ZQQ2 1576 aa22.5■■□□□ 1.19
PABPC4-219ENST00000525045 NCOA2Q15596 1464 aa22.49■■□□□ 1.19
PABPC4-219ENST00000525045 DNMT1P26358 1616 aaKnown RBP22.49■■□□□ 1.19
PABPC4-219ENST00000525045 THEMISQ8N1K5 641 aaPredicted RBP22.48■■□□□ 1.19
PABPC4-219ENST00000525045 FBXO31Q5XUX0 539 aaPredicted RBP22.47■■□□□ 1.19
PABPC4-219ENST00000525045 ANKLE2Q86XL3 938 aa22.47■■□□□ 1.19
PABPC4-219ENST00000525045 PZPP20742 1482 aa22.47■■□□□ 1.19
PABPC4-219ENST00000525045 CAMSAP2Q08AD1 1489 aa22.47■■□□□ 1.19
PABPC4-219ENST00000525045 KDM5DQ9BY66 1539 aa22.46■■□□□ 1.19
PABPC4-219ENST00000525045 MIA2Q96PC5 1412 aa22.43■■□□□ 1.18
PABPC4-219ENST00000525045 TOM1O60784 492 aa22.43■■□□□ 1.18
PABPC4-219ENST00000525045 ARHGEF5Q12774 1597 aa22.41■■□□□ 1.18
PABPC4-219ENST00000525045 NLRP1Q9C000 1473 aa22.41■■□□□ 1.18
PABPC4-219ENST00000525045 CPS1P31327 1500 aa22.4■■□□□ 1.18
PABPC4-219ENST00000525045 POLR1AO95602 1720 aaPredicted RBP22.38■■□□□ 1.17
PABPC4-219ENST00000525045 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.38■■□□□ 1.17
PABPC4-219ENST00000525045 SHANK2Q9UPX8 1470 aa22.37■■□□□ 1.17
PABPC4-219ENST00000525045 SCAF1Q9H7N4 1312 aaKnown RBP22.35■■□□□ 1.17
PABPC4-219ENST00000525045 UGGT1Q9NYU2 1555 aa22.35■■□□□ 1.17
PABPC4-219ENST00000525045 LRRC9Q6ZRR7 1453 aa22.34■■□□□ 1.17
PABPC4-219ENST00000525045 NEURL4Q96JN8 1562 aa22.33■■□□□ 1.17
PABPC4-219ENST00000525045 NPHP4O75161 1426 aaPredicted RBP22.32■■□□□ 1.16
PABPC4-219ENST00000525045 PIP4K2BP78356 416 aa22.32■■□□□ 1.16
PABPC4-219ENST00000525045 MED14O60244 1454 aa22.32■■□□□ 1.16
PABPC4-219ENST00000525045 VPS8Q8N3P4 1428 aa22.31■■□□□ 1.16
PABPC4-219ENST00000525045 HSPA1LP34931 641 aa22.3■■□□□ 1.16
PABPC4-219ENST00000525045 DEPDC5O75140 1603 aa22.3■■□□□ 1.16
PABPC4-219ENST00000525045 MAST1Q9Y2H9 1570 aa22.29■■□□□ 1.16
PABPC4-219ENST00000525045 RNF17Q9BXT8 1623 aaKnown RBP22.28■■□□□ 1.16
PABPC4-219ENST00000525045 ZC3H13Q5T200 1668 aaKnown RBP22.27■■□□□ 1.16
PABPC4-219ENST00000525045 MAP3K1Q13233 1512 aa22.26■■□□□ 1.15
PABPC4-219ENST00000525045 MYOM3Q5VTT5 1437 aa22.26■■□□□ 1.15
PABPC4-219ENST00000525045 EIF2AK4Q9P2K8 1649 aaKnown RBP22.26■■□□□ 1.15
PABPC4-219ENST00000525045 ABCC3O15438 1527 aa22.26■■□□□ 1.15
PABPC4-219ENST00000525045 VWDEQ8N2E2 1590 aa22.25■■□□□ 1.15
PABPC4-219ENST00000525045 KANK4Q5T7N3 995 aaPredicted RBP22.23■■□□□ 1.15
PABPC4-219ENST00000525045 ERVK-7P63135 1459 aa22.22■■□□□ 1.15
PABPC4-219ENST00000525045 LOC105371045A0A1W2PR82 267 aa22.22■■□□□ 1.15
PABPC4-219ENST00000525045 IQGAP1P46940 1657 aa22.22■■□□□ 1.15
PABPC4-219ENST00000525045 DUOX2Q9NRD8 1548 aa22.21■■□□□ 1.15
PABPC4-219ENST00000525045 CFAP65Q6ZU64 1925 aaKnown RBP22.19■■□□□ 1.14
PABPC4-219ENST00000525045 APLP2Q06481 763 aa22.19■■□□□ 1.14
PABPC4-219ENST00000525045 ARHGAP31Q2M1Z3 1444 aa22.16■■□□□ 1.14
PABPC4-219ENST00000525045 TXNDC2Q86VQ3 553 aa22.16■■□□□ 1.14
PABPC4-219ENST00000525045 EID1Q9Y6B2 187 aa22.16■■□□□ 1.14
PABPC4-219ENST00000525045 MROH1Q8NDA8 1641 aa22.15■■□□□ 1.14
PABPC4-219ENST00000525045 MED1Q15648 1581 aaPredicted RBP22.15■■□□□ 1.14
PABPC4-219ENST00000525045 KIF15Q9NS87 1388 aa22.14■■□□□ 1.14
PABPC4-219ENST00000525045 PHF23Q9BUL5 403 aaPredicted RBP22.14■■□□□ 1.13
PABPC4-219ENST00000525045 RRP7BPQ9NSQ0 103 aa22.14■■□□□ 1.13
PABPC4-219ENST00000525045 LRRC7Q96NW7 1537 aa22.14■■□□□ 1.13
PABPC4-219ENST00000525045 SCAF11Q99590 1463 aaKnown RBP22.14■■□□□ 1.13
PABPC4-219ENST00000525045 CEP152O94986 1710 aa22.14■■□□□ 1.13
PABPC4-219ENST00000525045 ERBINQ96RT1 1412 aa22.13■■□□□ 1.13
PABPC4-219ENST00000525045 KANK1Q14678 1352 aa22.12■■□□□ 1.13
PABPC4-219ENST00000525045 UBR1Q8IWV7 1749 aa22.12■■□□□ 1.13
PABPC4-219ENST00000525045 LTKP29376 864 aa22.11■■□□□ 1.13
PABPC4-219ENST00000525045 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.11■■□□□ 1.139e-9■□□□□ 8
PABPC4-219ENST00000525045 STAG3Q9UJ98 1225 aa22.11■■□□□ 1.13
PABPC4-219ENST00000525045 SYNMO15061 1565 aa22.11■■□□□ 1.13
PABPC4-219ENST00000525045 ABCC5O15440 1437 aa22.1■■□□□ 1.13
PABPC4-219ENST00000525045 SLIT1O75093 1534 aa22.1■■□□□ 1.13
PABPC4-219ENST00000525045 ARHGAP23Q9P227 1491 aa22.09■■□□□ 1.13
PABPC4-219ENST00000525045 STRCP1A6NGW2 1772 aa22.08■■□□□ 1.13
PABPC4-219ENST00000525045 PRDM15P57071 1507 aaPredicted RBP22.08■■□□□ 1.13
PABPC4-219ENST00000525045 ALKQ9UM73 1620 aa22.08■■□□□ 1.13
PABPC4-219ENST00000525045 PTPN23Q9H3S7 1636 aa22.06■■□□□ 1.12
PABPC4-219ENST00000525045 ANKRD30AQ9BXX3 1397 aa22.05■■□□□ 1.12
PABPC4-219ENST00000525045 DAPK1P53355 1430 aa22.05■■□□□ 1.12
PABPC4-219ENST00000525045 TMEM2Q9UHN6 1383 aa22.04■■□□□ 1.12
PABPC4-219ENST00000525045 CROCC2H7BZ55 1655 aa22.03■■□□□ 1.12
PABPC4-219ENST00000525045 IDI1Q13907 227 aa22.01■■□□□ 1.11
PABPC4-219ENST00000525045 SENP3Q9H4L4 574 aaPredicted RBP22.01■■□□□ 1.11
PABPC4-219ENST00000525045 FGD6Q6ZV73 1430 aa22■■□□□ 1.11
PABPC4-219ENST00000525045 CHIC2Q9UKJ5 165 aa22■■□□□ 1.11
PABPC4-219ENST00000525045 KCNA6P17658 529 aa21.99■■□□□ 1.11
PABPC4-219ENST00000525045 PIK3C2BO00750 1634 aa21.98■■□□□ 1.11
PABPC4-219ENST00000525045 LMTK2Q8IWU2 1503 aa21.98■■□□□ 1.11
PABPC4-219ENST00000525045 SLC52A1Q9NWF4 448 aa21.98■■□□□ 1.11
PABPC4-219ENST00000525045 KDM5AP29375 1690 aaKnown RBP21.98■■□□□ 1.11
PABPC4-219ENST00000525045 EFCAB6Q5THR3 1501 aa21.96■■□□□ 1.11
PABPC4-219ENST00000525045 FAM135BQ49AJ0 1406 aa21.96■■□□□ 1.11
PABPC4-219ENST00000525045 PROSER2Q86WR7 435 aaPredicted RBP21.94■■□□□ 1.1
PABPC4-219ENST00000525045 HDGFP51858 240 aaKnown RBP21.93■■□□□ 1.1
PABPC4-219ENST00000525045 NOS1P29475 1434 aa21.92■■□□□ 1.1
PABPC4-219ENST00000525045 TMEM94Q12767 1356 aa21.92■■□□□ 1.1
PABPC4-219ENST00000525045 BCANQ96GW7 911 aa21.91■■□□□ 1.1
PABPC4-219ENST00000525045 SLC26A8Q96RN1 970 aa21.91■■□□□ 1.1
PABPC4-219ENST00000525045 XIRP1Q702N8 1843 aaKnown RBP21.91■■□□□ 1.1
PABPC4-219ENST00000525045 ADGRL2O95490 1459 aa21.88■■□□□ 1.09
PABPC4-219ENST00000525045 TET3O43151 1660 aa21.88■■□□□ 1.09
PABPC4-219ENST00000525045 FAM50AQ14320 339 aaKnown RBP21.87■■□□□ 1.09
PABPC4-219ENST00000525045 RPRD2Q5VT52 1461 aaKnown RBP21.86■■□□□ 1.09
PABPC4-219ENST00000525045 ANKRD50Q9ULJ7 1429 aa21.85■■□□□ 1.09
PABPC4-219ENST00000525045 ADGRB3O60242 1522 aa21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms