RNA–Protein interactions for RNA: ENST00000524568.1

NDUFS3-202, Transcript of NADH:ubiquinone oxidoreductase core subunit S3, humanhuman

TSL 2

Gene NDUFS3, Length 733 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3-202ENST00000524568 RNF17Q9BXT8 1623 aaKnown RBP30.68■■■□□ 2.5
NDUFS3-202ENST00000524568 PPP6R1Q9UPN7 881 aa30.67■■■□□ 2.5
NDUFS3-202ENST00000524568 APLP2Q06481 763 aa30.66■■■□□ 2.5
NDUFS3-202ENST00000524568 MROH1Q8NDA8 1641 aa30.64■■■□□ 2.5
NDUFS3-202ENST00000524568 ABCC5O15440 1437 aa30.63■■■□□ 2.49
NDUFS3-202ENST00000524568 FGD6Q6ZV73 1430 aa30.63■■■□□ 2.49
NDUFS3-202ENST00000524568 EIF2AK4Q9P2K8 1649 aaKnown RBP30.62■■■□□ 2.49
NDUFS3-202ENST00000524568 FAM135AQ9P2D6 1515 aa30.62■■■□□ 2.49
NDUFS3-202ENST00000524568 FBXO31Q5XUX0 539 aaPredicted RBP30.61■■■□□ 2.49
NDUFS3-202ENST00000524568 DNMT1P26358 1616 aaKnown RBP30.61■■■□□ 2.49
NDUFS3-202ENST00000524568 PTPRTO14522 1441 aa30.6■■■□□ 2.49
NDUFS3-202ENST00000524568 PZPP20742 1482 aa30.6■■■□□ 2.49
NDUFS3-202ENST00000524568 TCOF1Q13428 1488 aaKnown RBP30.6■■■□□ 2.49
NDUFS3-202ENST00000524568 CEP152O94986 1710 aa30.59■■■□□ 2.49
NDUFS3-202ENST00000524568 CERKQ8TCT0 537 aa30.58■■■□□ 2.49
NDUFS3-202ENST00000524568 ABCC3O15438 1527 aa30.57■■■□□ 2.49
NDUFS3-202ENST00000524568 SHANK2Q9UPX8 1470 aa30.57■■■□□ 2.48
NDUFS3-202ENST00000524568 DAPK1P53355 1430 aa30.56■■■□□ 2.48
NDUFS3-202ENST00000524568 WASHC2CQ9Y4E1 1318 aa30.56■■■□□ 2.48
NDUFS3-202ENST00000524568 DMRT2Q9Y5R5 561 aa30.56■■■□□ 2.48
NDUFS3-202ENST00000524568 DUOX2Q9NRD8 1548 aa30.56■■■□□ 2.48
NDUFS3-202ENST00000524568 ZC3H13Q5T200 1668 aaKnown RBP30.55■■■□□ 2.48
NDUFS3-202ENST00000524568 NCKAP5LQ9HCH0 1330 aa30.54■■■□□ 2.48
NDUFS3-202ENST00000524568 A2ML1A8K2U0 1454 aa30.54■■■□□ 2.48
NDUFS3-202ENST00000524568 TNRQ92752 1358 aa30.53■■■□□ 2.48
NDUFS3-202ENST00000524568 KIF15Q9NS87 1388 aa30.52■■■□□ 2.48
NDUFS3-202ENST00000524568 CFAP65Q6ZU64 1925 aaKnown RBP30.51■■■□□ 2.48
NDUFS3-202ENST00000524568 PLA2R1Q13018 1463 aa30.51■■■□□ 2.48
NDUFS3-202ENST00000524568 LTBP4Q8N2S1 1624 aa30.51■■■□□ 2.47
NDUFS3-202ENST00000524568 RRP7BPQ9NSQ0 103 aa30.47■■■□□ 2.47
NDUFS3-202ENST00000524568 POLR1AO95602 1720 aaPredicted RBP30.45■■■□□ 2.47
NDUFS3-202ENST00000524568 PRDM15P57071 1507 aaPredicted RBP30.45■■■□□ 2.47
NDUFS3-202ENST00000524568 DEPDC5O75140 1603 aa30.44■■■□□ 2.46
NDUFS3-202ENST00000524568 SPATA31D1Q6ZQQ2 1576 aa30.43■■■□□ 2.46
NDUFS3-202ENST00000524568 NEURL4Q96JN8 1562 aa30.42■■■□□ 2.46
NDUFS3-202ENST00000524568 ERBINQ96RT1 1412 aa30.42■■■□□ 2.46
NDUFS3-202ENST00000524568 CHIC2Q9UKJ5 165 aa30.42■■■□□ 2.46
NDUFS3-202ENST00000524568 ERVK-7P63135 1459 aa30.4■■■□□ 2.46
NDUFS3-202ENST00000524568 PKD2Q13563 968 aa30.37■■■□□ 2.45
NDUFS3-202ENST00000524568 NLRP1Q9C000 1473 aa30.37■■■□□ 2.45
NDUFS3-202ENST00000524568 ZNF335Q9H4Z2 1342 aaPredicted RBP30.36■■■□□ 2.45
NDUFS3-202ENST00000524568 UGGT1Q9NYU2 1555 aa30.35■■■□□ 2.45
NDUFS3-202ENST00000524568 FAM50AQ14320 339 aaKnown RBP30.34■■■□□ 2.45
NDUFS3-202ENST00000524568 ADGRL2O95490 1459 aa30.33■■■□□ 2.45
NDUFS3-202ENST00000524568 ANKRD30AQ9BXX3 1397 aa30.33■■■□□ 2.45
NDUFS3-202ENST00000524568 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.33■■■□□ 2.45
NDUFS3-202ENST00000524568 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.3■■■□□ 2.44
NDUFS3-202ENST00000524568 UBR1Q8IWV7 1749 aa30.3■■■□□ 2.44
NDUFS3-202ENST00000524568 VWDEQ8N2E2 1590 aa30.29■■■□□ 2.44
NDUFS3-202ENST00000524568 PPARGC1BQ86YN6 1023 aaKnown RBP30.27■■■□□ 2.44
NDUFS3-202ENST00000524568 ARHGAP31Q2M1Z3 1444 aa30.25■■■□□ 2.43
NDUFS3-202ENST00000524568 LMTK2Q8IWU2 1503 aa30.22■■■□□ 2.43
NDUFS3-202ENST00000524568 IQSEC2Q5JU85 1478 aa30.21■■■□□ 2.43
NDUFS3-202ENST00000524568 THEMISQ8N1K5 641 aaPredicted RBP30.21■■■□□ 2.43
NDUFS3-202ENST00000524568 PIK3C2BO00750 1634 aa30.2■■■□□ 2.43
NDUFS3-202ENST00000524568 IQGAP1P46940 1657 aa30.2■■■□□ 2.42
NDUFS3-202ENST00000524568 MED14O60244 1454 aa30.18■■■□□ 2.42
NDUFS3-202ENST00000524568 EFCAB6Q5THR3 1501 aa30.17■■■□□ 2.42
NDUFS3-202ENST00000524568 KANK1Q14678 1352 aa30.17■■■□□ 2.42
NDUFS3-202ENST00000524568 SYNMO15061 1565 aa30.17■■■□□ 2.42
NDUFS3-202ENST00000524568 NPHP4O75161 1426 aaPredicted RBP30.17■■■□□ 2.42
NDUFS3-202ENST00000524568 ANKLE2Q86XL3 938 aa30.17■■■□□ 2.42
NDUFS3-202ENST00000524568 ANKRD50Q9ULJ7 1429 aa30.16■■■□□ 2.42
NDUFS3-202ENST00000524568 STRCP1A6NGW2 1772 aa30.14■■■□□ 2.42
NDUFS3-202ENST00000524568 UNC13BO14795 1591 aa30.11■■■□□ 2.41
NDUFS3-202ENST00000524568 ARHGAP23Q9P227 1491 aa30.09■■■□□ 2.41
NDUFS3-202ENST00000524568 SLIT1O75093 1534 aa30.08■■■□□ 2.41
NDUFS3-202ENST00000524568 TET3O43151 1660 aa30.07■■■□□ 2.41
NDUFS3-202ENST00000524568 NOS1P29475 1434 aa30.06■■■□□ 2.4
NDUFS3-202ENST00000524568 SCAF11Q99590 1463 aaKnown RBP30.06■■■□□ 2.4
NDUFS3-202ENST00000524568 LTKP29376 864 aa30.05■■■□□ 2.4
NDUFS3-202ENST00000524568 CPS1P31327 1500 aa30.05■■■□□ 2.4
NDUFS3-202ENST00000524568 GCC2Q8IWJ2 1684 aa30.04■■■□□ 2.4
NDUFS3-202ENST00000524568 ITGAEP38570 1179 aa30.04■■■□□ 2.4
NDUFS3-202ENST00000524568 KDM5AP29375 1690 aaKnown RBP30.04■■■□□ 2.4
NDUFS3-202ENST00000524568 MYO5BQ9ULV0 1848 aa30.03■■■□□ 2.4
NDUFS3-202ENST00000524568 ROCK1Q13464 1354 aa30.03■■■□□ 2.4
NDUFS3-202ENST00000524568 IDI1Q13907 227 aa30.01■■■□□ 2.39
NDUFS3-202ENST00000524568 UBAP1LF5GYI3 381 aa30■■■□□ 2.39
NDUFS3-202ENST00000524568 E9PCH4 1651 aa30■■■□□ 2.39
NDUFS3-202ENST00000524568 ADGRB3O60242 1522 aa29.99■■■□□ 2.39
NDUFS3-202ENST00000524568 IQGAP3Q86VI3 1631 aa29.97■■■□□ 2.39
NDUFS3-202ENST00000524568 TMEM2Q9UHN6 1383 aa29.97■■■□□ 2.39
NDUFS3-202ENST00000524568 RPRD2Q5VT52 1461 aaKnown RBP29.96■■■□□ 2.39
NDUFS3-202ENST00000524568 TXNDC2Q86VQ3 553 aa29.96■■■□□ 2.39
NDUFS3-202ENST00000524568 ALKQ9UM73 1620 aa29.95■■■□□ 2.38
NDUFS3-202ENST00000524568 LRRC7Q96NW7 1537 aa29.91■■■□□ 2.38
NDUFS3-202ENST00000524568 STAG3Q9UJ98 1225 aa29.91■■■□□ 2.38
NDUFS3-202ENST00000524568 RRBP1Q9P2E9 1410 aaKnown RBP29.9■■■□□ 2.38
NDUFS3-202ENST00000524568 XIRP1Q702N8 1843 aaKnown RBP29.9■■■□□ 2.38
NDUFS3-202ENST00000524568 TMEM131LA2VDJ0 1609 aa29.88■■■□□ 2.37
NDUFS3-202ENST00000524568 EID1Q9Y6B2 187 aa29.86■■■□□ 2.37
NDUFS3-202ENST00000524568 NUP155O75694 1391 aa29.83■■■□□ 2.37
NDUFS3-202ENST00000524568 SLC52A1Q9NWF4 448 aa29.83■■■□□ 2.37
NDUFS3-202ENST00000524568 PIP4K2BP78356 416 aa29.81■■■□□ 2.36
NDUFS3-202ENST00000524568 ZFYVE9O95405 1425 aa29.8■■■□□ 2.36
NDUFS3-202ENST00000524568 SENP3Q9H4L4 574 aaPredicted RBP29.8■■■□□ 2.36
NDUFS3-202ENST00000524568 SCAF1Q9H7N4 1312 aaKnown RBP29.79■■■□□ 2.36
NDUFS3-202ENST00000524568 SLC26A8Q96RN1 970 aa29.76■■■□□ 2.35
NDUFS3-202ENST00000524568 SPHKAPQ2M3C7 1700 aa29.76■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms