RNA–Protein interactions for RNA: ENST00000523328.5

PVT1-218, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best)

Gene PVT1, Length 343 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-218ENST00000523328 CAMSAP2Q08AD1 1489 aa36.56■■■■□ 3.44
PVT1-218ENST00000523328 NCOA2Q15596 1464 aa36.56■■■■□ 3.44
PVT1-218ENST00000523328 FAM135AQ9P2D6 1515 aa36.55■■■■□ 3.44
PVT1-218ENST00000523328 KIF3BO15066 747 aa36.55■■■■□ 3.44
PVT1-218ENST00000523328 POLR1AO95602 1720 aaPredicted RBP36.55■■■■□ 3.44
PVT1-218ENST00000523328 KDM5DQ9BY66 1539 aa36.54■■■■□ 3.44
PVT1-218ENST00000523328 PZPP20742 1482 aa36.54■■■■□ 3.44
PVT1-218ENST00000523328 FBXO31Q5XUX0 539 aaPredicted RBP36.53■■■■□ 3.44
PVT1-218ENST00000523328 TNRQ92752 1358 aa36.53■■■■□ 3.44
PVT1-218ENST00000523328 NEURL4Q96JN8 1562 aa36.51■■■■□ 3.44
PVT1-218ENST00000523328 RSPH4AQ5TD94 716 aa36.49■■■■□ 3.43
PVT1-218ENST00000523328 ARHGEF5Q12774 1597 aa36.46■■■■□ 3.43
PVT1-218ENST00000523328 WASHC2CQ9Y4E1 1318 aa36.44■■■■□ 3.42
PVT1-218ENST00000523328 CPS1P31327 1500 aa36.39■■■■□ 3.42
PVT1-218ENST00000523328 MIA2Q96PC5 1412 aa36.39■■■■□ 3.42
PVT1-218ENST00000523328 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP36.38■■■■□ 3.41
PVT1-218ENST00000523328 NLRP1Q9C000 1473 aa36.37■■■■□ 3.41
PVT1-218ENST00000523328 SHANK2Q9UPX8 1470 aa36.37■■■■□ 3.41
PVT1-218ENST00000523328 TSPY4P0CV99 314 aa36.34■■■■□ 3.41
PVT1-218ENST00000523328 TSPY10P0CW01 314 aa36.34■■■■□ 3.41
PVT1-218ENST00000523328 UGGT1Q9NYU2 1555 aa36.34■■■■□ 3.41
PVT1-218ENST00000523328 RNF17Q9BXT8 1623 aaKnown RBP36.34■■■■□ 3.41
PVT1-218ENST00000523328 ANKLE2Q86XL3 938 aa36.33■■■■□ 3.41
PVT1-218ENST00000523328 VWDEQ8N2E2 1590 aa36.32■■■■□ 3.41
PVT1-218ENST00000523328 THEMISQ8N1K5 641 aaPredicted RBP36.32■■■■□ 3.4
PVT1-218ENST00000523328 DEPDC5O75140 1603 aa36.32■■■■□ 3.4
PVT1-218ENST00000523328 MED14O60244 1454 aa36.31■■■■□ 3.4
PVT1-218ENST00000523328 MAST1Q9Y2H9 1570 aa36.3■■■■□ 3.4
PVT1-218ENST00000523328 LRRC9Q6ZRR7 1453 aa36.3■■■■□ 3.4
PVT1-218ENST00000523328 ZC3H13Q5T200 1668 aaKnown RBP36.27■■■■□ 3.4
PVT1-218ENST00000523328 ABCC3O15438 1527 aa36.27■■■■□ 3.4
PVT1-218ENST00000523328 NPHP4O75161 1426 aaPredicted RBP36.26■■■■□ 3.4
PVT1-218ENST00000523328 TOM1O60784 492 aa36.25■■■■□ 3.39
PVT1-218ENST00000523328 HSPA1LP34931 641 aa36.25■■■■□ 3.39
PVT1-218ENST00000523328 EIF2AK4Q9P2K8 1649 aaKnown RBP36.24■■■■□ 3.39
PVT1-218ENST00000523328 PIP4K2BP78356 416 aa36.24■■■■□ 3.39
PVT1-218ENST00000523328 SCAF1Q9H7N4 1312 aaKnown RBP36.24■■■■□ 3.39
PVT1-218ENST00000523328 VPS8Q8N3P4 1428 aa36.24■■■■□ 3.39
PVT1-218ENST00000523328 IQGAP1P46940 1657 aa36.22■■■■□ 3.39
PVT1-218ENST00000523328 MROH1Q8NDA8 1641 aa36.21■■■■□ 3.39
PVT1-218ENST00000523328 ALKQ9UM73 1620 aa36.19■■■■□ 3.38
PVT1-218ENST00000523328 ERVK-7P63135 1459 aa36.18■■■■□ 3.38
PVT1-218ENST00000523328 MED1Q15648 1581 aaPredicted RBP36.17■■■■□ 3.38
PVT1-218ENST00000523328 STRCP1A6NGW2 1772 aa36.16■■■■□ 3.38
PVT1-218ENST00000523328 CEP152O94986 1710 aa36.15■■■■□ 3.38
PVT1-218ENST00000523328 KANK4Q5T7N3 995 aaPredicted RBP36.14■■■■□ 3.38
PVT1-218ENST00000523328 CFAP65Q6ZU64 1925 aaKnown RBP36.13■■■■□ 3.37
PVT1-218ENST00000523328 MAP3K1Q13233 1512 aa36.13■■■■□ 3.37
PVT1-218ENST00000523328 MYOM3Q5VTT5 1437 aa36.11■■■■□ 3.37
PVT1-218ENST00000523328 UBR1Q8IWV7 1749 aa36.09■■■■□ 3.37
PVT1-218ENST00000523328 DUOX2Q9NRD8 1548 aa36.07■■■■□ 3.36
PVT1-218ENST00000523328 LRRC7Q96NW7 1537 aa36.06■■■■□ 3.36
PVT1-218ENST00000523328 LOC105371045A0A1W2PR82 267 aa36.04■■■■□ 3.36
PVT1-218ENST00000523328 SYNMO15061 1565 aa36.04■■■■□ 3.36
PVT1-218ENST00000523328 PRDM15P57071 1507 aaPredicted RBP35.99■■■■□ 3.35
PVT1-218ENST00000523328 CROCC2H7BZ55 1655 aa35.98■■■■□ 3.35
PVT1-218ENST00000523328 SCAF11Q99590 1463 aaKnown RBP35.98■■■■□ 3.35
PVT1-218ENST00000523328 ARHGAP31Q2M1Z3 1444 aa35.97■■■■□ 3.35
PVT1-218ENST00000523328 ARHGAP23Q9P227 1491 aa35.97■■■■□ 3.35
PVT1-218ENST00000523328 SLIT1O75093 1534 aa35.96■■■■□ 3.35
PVT1-218ENST00000523328 KIF15Q9NS87 1388 aa35.95■■■■□ 3.35
PVT1-218ENST00000523328 ERBINQ96RT1 1412 aa35.93■■■■□ 3.34
PVT1-218ENST00000523328 ABCC5O15440 1437 aa35.92■■■■□ 3.34
PVT1-218ENST00000523328 LTKP29376 864 aa35.92■■■■□ 3.34
PVT1-218ENST00000523328 PTPN23Q9H3S7 1636 aa35.89■■■■□ 3.34
PVT1-218ENST00000523328 XIRP1Q702N8 1843 aaKnown RBP35.87■■■■□ 3.33
PVT1-218ENST00000523328 TXNDC2Q86VQ3 553 aa35.87■■■■□ 3.33
PVT1-218ENST00000523328 PIK3C2BO00750 1634 aa35.86■■■■□ 3.33
PVT1-218ENST00000523328 RRP7BPQ9NSQ0 103 aa35.86■■■■□ 3.33
PVT1-218ENST00000523328 DAPK1P53355 1430 aa35.83■■■■□ 3.33
PVT1-218ENST00000523328 SENP3Q9H4L4 574 aaPredicted RBP35.82■■■■□ 3.32
PVT1-218ENST00000523328 PHF23Q9BUL5 403 aaPredicted RBP35.81■■■■□ 3.32
PVT1-218ENST00000523328 GRWD1Q9BQ67 446 aaKnown RBP eCLIP35.8■■■■□ 3.325e-6■■■■□ 19.5
PVT1-218ENST00000523328 TMEM2Q9UHN6 1383 aa35.78■■■■□ 3.32
PVT1-218ENST00000523328 EID1Q9Y6B2 187 aa35.78■■■■□ 3.32
PVT1-218ENST00000523328 KDM5AP29375 1690 aaKnown RBP35.78■■■■□ 3.32
PVT1-218ENST00000523328 LMTK2Q8IWU2 1503 aa35.75■■■■□ 3.31
PVT1-218ENST00000523328 KANK1Q14678 1352 aa35.75■■■■□ 3.31
PVT1-218ENST00000523328 FGD6Q6ZV73 1430 aa35.74■■■■□ 3.31
PVT1-218ENST00000523328 EFCAB6Q5THR3 1501 aa35.73■■■■□ 3.31
PVT1-218ENST00000523328 IDI1Q13907 227 aa35.69■■■■□ 3.3
PVT1-218ENST00000523328 STAG3Q9UJ98 1225 aa35.69■■■■□ 3.3
PVT1-218ENST00000523328 ANKRD30AQ9BXX3 1397 aa35.68■■■■□ 3.3
PVT1-218ENST00000523328 APLP2Q06481 763 aa35.67■■■■□ 3.3
PVT1-218ENST00000523328 CHIC2Q9UKJ5 165 aa35.66■■■■□ 3.3
PVT1-218ENST00000523328 TET3O43151 1660 aa35.65■■■■□ 3.3
PVT1-218ENST00000523328 NOS1P29475 1434 aa35.65■■■■□ 3.3
PVT1-218ENST00000523328 FAM135BQ49AJ0 1406 aa35.63■■■■□ 3.29
PVT1-218ENST00000523328 TMEM94Q12767 1356 aa35.62■■■■□ 3.29
PVT1-218ENST00000523328 ADGRB3O60242 1522 aa35.59■■■■□ 3.29
PVT1-218ENST00000523328 KCNA6P17658 529 aa35.59■■■■□ 3.29
PVT1-218ENST00000523328 RGS17Q9UGC6 210 aaPredicted RBP35.59■■■■□ 3.29
PVT1-218ENST00000523328 ADGRL2O95490 1459 aa35.57■■■■□ 3.28
PVT1-218ENST00000523328 SLC26A8Q96RN1 970 aa35.56■■■■□ 3.28
PVT1-218ENST00000523328 NWD1Q149M9 1564 aa35.54■■■■□ 3.28
PVT1-218ENST00000523328 ROBO1Q9Y6N7 1651 aa35.52■■■■□ 3.28
PVT1-218ENST00000523328 SLC52A1Q9NWF4 448 aa35.51■■■■□ 3.28
PVT1-218ENST00000523328 NKTRP30414 1462 aaKnown RBP35.5■■■■□ 3.27
PVT1-218ENST00000523328 PROSER2Q86WR7 435 aaPredicted RBP35.5■■■■□ 3.27
PVT1-218ENST00000523328 RBM33Q96EV2 1170 aaKnown RBP35.49■■■■□ 3.27
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms