RNA–Protein interactions for RNA: ENST00000521545.6

LAPTM4B-203, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LAPTM4B, Length 915 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-203ENST00000521545 KDM5DQ9BY66 1539 aa40.46■■■■■ 4.07
LAPTM4B-203ENST00000521545 CAMSAP1Q5T5Y3 1602 aa40.45■■■■■ 4.07
LAPTM4B-203ENST00000521545 MYO3AQ8NEV4 1616 aa40.43■■■■■ 4.06
LAPTM4B-203ENST00000521545 PTPN23Q9H3S7 1636 aa40.4■■■■■ 4.06
LAPTM4B-203ENST00000521545 CEP170BQ9Y4F5 1589 aaPredicted RBP40.39■■■■■ 4.06
LAPTM4B-203ENST00000521545 ZNF142P52746 1687 aaPredicted RBP40.38■■■■■ 4.05
LAPTM4B-203ENST00000521545 FBXO31Q5XUX0 539 aaPredicted RBP40.38■■■■■ 4.05
LAPTM4B-203ENST00000521545 PZPP20742 1482 aa40.36■■■■■ 4.05
LAPTM4B-203ENST00000521545 FGD6Q6ZV73 1430 aa40.35■■■■■ 4.05
LAPTM4B-203ENST00000521545 TNRQ92752 1358 aa40.35■■■■■ 4.05
LAPTM4B-203ENST00000521545 NCKAP5LQ9HCH0 1330 aa40.34■■■■■ 4.05
LAPTM4B-203ENST00000521545 ABCC5O15440 1437 aa40.33■■■■■ 4.05
LAPTM4B-203ENST00000521545 PKD2Q13563 968 aa40.32■■■■■ 4.05
LAPTM4B-203ENST00000521545 A2ML1A8K2U0 1454 aa40.32■■■■■ 4.04
LAPTM4B-203ENST00000521545 DUOX2Q9NRD8 1548 aa40.32■■■■■ 4.04
LAPTM4B-203ENST00000521545 RNF17Q9BXT8 1623 aaKnown RBP40.31■■■■■ 4.04
LAPTM4B-203ENST00000521545 EIF2AK4Q9P2K8 1649 aaKnown RBP40.31■■■■■ 4.04
LAPTM4B-203ENST00000521545 SHANK2Q9UPX8 1470 aa40.31■■■■■ 4.04
LAPTM4B-203ENST00000521545 PLA2R1Q13018 1463 aa40.3■■■■■ 4.04
LAPTM4B-203ENST00000521545 TCOF1Q13428 1488 aaKnown RBP40.28■■■■■ 4.04
LAPTM4B-203ENST00000521545 KIF15Q9NS87 1388 aa40.28■■■■■ 4.04
LAPTM4B-203ENST00000521545 RRP7BPQ9NSQ0 103 aa40.28■■■■■ 4.04
LAPTM4B-203ENST00000521545 DAPK1P53355 1430 aa40.27■■■■■ 4.04
LAPTM4B-203ENST00000521545 CROCC2H7BZ55 1655 aa40.25■■■■■ 4.03
LAPTM4B-203ENST00000521545 DNMT1P26358 1616 aaKnown RBP40.23■■■■■ 4.03
LAPTM4B-203ENST00000521545 ABCC3O15438 1527 aa40.21■■■■■ 4.03
LAPTM4B-203ENST00000521545 ZC3H13Q5T200 1668 aaKnown RBP40.21■■■■■ 4.03
LAPTM4B-203ENST00000521545 CHIC2Q9UKJ5 165 aa40.18■■■■■ 4.02
LAPTM4B-203ENST00000521545 ERBINQ96RT1 1412 aa40.17■■■■■ 4.02
LAPTM4B-203ENST00000521545 ANKRD30AQ9BXX3 1397 aa40.16■■■■■ 4.02
LAPTM4B-203ENST00000521545 NLRP1Q9C000 1473 aa40.15■■■■■ 4.02
LAPTM4B-203ENST00000521545 MROH1Q8NDA8 1641 aa40.15■■■■■ 4.02
LAPTM4B-203ENST00000521545 FAM50AQ14320 339 aaKnown RBP40.14■■■■■ 4.02
LAPTM4B-203ENST00000521545 THEMISQ8N1K5 641 aaPredicted RBP40.14■■■■■ 4.02
LAPTM4B-203ENST00000521545 LTBP4Q8N2S1 1624 aa40.12■■■■■ 4.01
LAPTM4B-203ENST00000521545 GRWD1Q9BQ67 446 aaKnown RBP eCLIP40.1■■■■■ 4.01
LAPTM4B-203ENST00000521545 CEP152O94986 1710 aa40.08■■■■■ 4.01
LAPTM4B-203ENST00000521545 ANKLE2Q86XL3 938 aa40.06■■■■■ 4
LAPTM4B-203ENST00000521545 ZNF335Q9H4Z2 1342 aaPredicted RBP40.06■■■■■ 4
LAPTM4B-203ENST00000521545 SPATA31D1Q6ZQQ2 1576 aa40.06■■■■■ 4
LAPTM4B-203ENST00000521545 UGGT1Q9NYU2 1555 aa40.06■■■■■ 4
LAPTM4B-203ENST00000521545 KANK1Q14678 1352 aa40.05■■■■■ 4
LAPTM4B-203ENST00000521545 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP40.05■■■■■ 41e-8■■□□□ 13.4
LAPTM4B-203ENST00000521545 ERVK-7P63135 1459 aa40.04■■■■■ 4
LAPTM4B-203ENST00000521545 PRDM15P57071 1507 aaPredicted RBP40.03■■■■■ 4
LAPTM4B-203ENST00000521545 IQSEC2Q5JU85 1478 aa40■■■■□ 3.99
LAPTM4B-203ENST00000521545 POLR1AO95602 1720 aaPredicted RBP39.98■■■■□ 3.99
LAPTM4B-203ENST00000521545 CFAP65Q6ZU64 1925 aaKnown RBP39.98■■■■□ 3.99
LAPTM4B-203ENST00000521545 ARHGAP31Q2M1Z3 1444 aa39.97■■■■□ 3.99
LAPTM4B-203ENST00000521545 ADGRL2O95490 1459 aa39.95■■■■□ 3.99
LAPTM4B-203ENST00000521545 DEPDC5O75140 1603 aa39.95■■■■□ 3.99
LAPTM4B-203ENST00000521545 NEURL4Q96JN8 1562 aa39.91■■■■□ 3.98
LAPTM4B-203ENST00000521545 NPHP4O75161 1426 aaPredicted RBP39.84■■■■□ 3.97
LAPTM4B-203ENST00000521545 MED14O60244 1454 aa39.83■■■■□ 3.97
LAPTM4B-203ENST00000521545 ANKRD50Q9ULJ7 1429 aa39.82■■■■□ 3.97
LAPTM4B-203ENST00000521545 LMTK2Q8IWU2 1503 aa39.82■■■■□ 3.97
LAPTM4B-203ENST00000521545 PPARGC1BQ86YN6 1023 aaKnown RBP39.81■■■■□ 3.96
LAPTM4B-203ENST00000521545 VWDEQ8N2E2 1590 aa39.8■■■■□ 3.96
LAPTM4B-203ENST00000521545 UBR1Q8IWV7 1749 aa39.78■■■■□ 3.96
LAPTM4B-203ENST00000521545 UBAP1LF5GYI3 381 aa39.77■■■■□ 3.96
LAPTM4B-203ENST00000521545 STAG3Q9UJ98 1225 aa39.76■■■■□ 3.96
LAPTM4B-203ENST00000521545 CPS1P31327 1500 aa39.73■■■■□ 3.95
LAPTM4B-203ENST00000521545 IQGAP1P46940 1657 aa39.72■■■■□ 3.95
LAPTM4B-203ENST00000521545 TXNDC2Q86VQ3 553 aa39.71■■■■□ 3.95
LAPTM4B-203ENST00000521545 EID1Q9Y6B2 187 aa39.7■■■■□ 3.95
LAPTM4B-203ENST00000521545 EFCAB6Q5THR3 1501 aa39.69■■■■□ 3.94
LAPTM4B-203ENST00000521545 ROCK1Q13464 1354 aa39.69■■■■□ 3.94
LAPTM4B-203ENST00000521545 ITGAEP38570 1179 aa39.68■■■■□ 3.94
LAPTM4B-203ENST00000521545 SCAF11Q99590 1463 aaKnown RBP39.68■■■■□ 3.94
LAPTM4B-203ENST00000521545 IDI1Q13907 227 aa39.67■■■■□ 3.94
LAPTM4B-203ENST00000521545 PIK3C2BO00750 1634 aa39.66■■■■□ 3.94
LAPTM4B-203ENST00000521545 SLIT1O75093 1534 aa39.65■■■■□ 3.94
LAPTM4B-203ENST00000521545 ARHGAP23Q9P227 1491 aa39.65■■■■□ 3.94
LAPTM4B-203ENST00000521545 LTKP29376 864 aa39.65■■■■□ 3.94
LAPTM4B-203ENST00000521545 NOS1P29475 1434 aa39.63■■■■□ 3.93
LAPTM4B-203ENST00000521545 SLC52A1Q9NWF4 448 aa39.61■■■■□ 3.93
LAPTM4B-203ENST00000521545 RPRD2Q5VT52 1461 aaKnown RBP39.6■■■■□ 3.93
LAPTM4B-203ENST00000521545 TMEM2Q9UHN6 1383 aa39.59■■■■□ 3.93
LAPTM4B-203ENST00000521545 SYNMO15061 1565 aa39.59■■■■□ 3.93
LAPTM4B-203ENST00000521545 TOM1O60784 492 aa39.56■■■■□ 3.92
LAPTM4B-203ENST00000521545 KDM5AP29375 1690 aaKnown RBP39.56■■■■□ 3.92
LAPTM4B-203ENST00000521545 TET3O43151 1660 aa39.54■■■■□ 3.92
LAPTM4B-203ENST00000521545 UNC13BO14795 1591 aa39.54■■■■□ 3.92
LAPTM4B-203ENST00000521545 SCAF1Q9H7N4 1312 aaKnown RBP39.5■■■■□ 3.91
LAPTM4B-203ENST00000521545 ADGRB3O60242 1522 aa39.47■■■■□ 3.91
LAPTM4B-203ENST00000521545 GCC2Q8IWJ2 1684 aa39.47■■■■□ 3.91
LAPTM4B-203ENST00000521545 PIP4K2BP78356 416 aa39.46■■■■□ 3.91
LAPTM4B-203ENST00000521545 NUP155O75694 1391 aa39.45■■■■□ 3.91
LAPTM4B-203ENST00000521545 STRCP1A6NGW2 1772 aa39.43■■■■□ 3.9
LAPTM4B-203ENST00000521545 LRRC7Q96NW7 1537 aa39.41■■■■□ 3.9
LAPTM4B-203ENST00000521545 DISP3Q9P2K9 1392 aa39.4■■■■□ 3.9
LAPTM4B-203ENST00000521545 IQGAP3Q86VI3 1631 aa39.4■■■■□ 3.9
LAPTM4B-203ENST00000521545 RRBP1Q9P2E9 1410 aaKnown RBP39.39■■■■□ 3.9
LAPTM4B-203ENST00000521545 HDGFP51858 240 aaKnown RBP39.37■■■■□ 3.89
LAPTM4B-203ENST00000521545 BCANQ96GW7 911 aa39.36■■■■□ 3.89
LAPTM4B-203ENST00000521545 E9PCH4 1651 aa39.35■■■■□ 3.89
LAPTM4B-203ENST00000521545 CHGAP10645 457 aaKnown RBP39.35■■■■□ 3.89
LAPTM4B-203ENST00000521545 SLC26A8Q96RN1 970 aa39.33■■■■□ 3.89
LAPTM4B-203ENST00000521545 PPP1R15AO75807 674 aaPredicted RBP39.3■■■■□ 3.88
LAPTM4B-203ENST00000521545 HSPA1LP34931 641 aa39.28■■■■□ 3.88
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms