RNA–Protein interactions for RNA: ENST00000521545.6

LAPTM4B-203, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LAPTM4B, Length 915 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-203ENST00000521545 UTP3Q9NQZ2 479 aaKnown RBP eCLIP27.5■■□□□ 1.991e-15■■■■■ 139.7
LAPTM4B-203ENST00000521545 DDX3XO00571 662 aaKnown RBP eCLIP26.24■■□□□ 1.793e-11■■■■■ 40.6
LAPTM4B-203ENST00000521545 PCBP2Q15366 365 aaKnown RBP eCLIP24.08■■□□□ 1.455e-11■■■■■ 44
LAPTM4B-203ENST00000521545 YBX3P16989 372 aaKnown RBP eCLIP34.8■■■■□ 3.165e-11■■■■□ 21
LAPTM4B-203ENST00000521545 FTOQ9C0B1 505 aaKnown RBP eCLIP29.88■■■□□ 2.372e-10■□□□□ 10.1
LAPTM4B-203ENST00000521545 FMR1Q06787 632 aaKnown RBP eCLIP33.03■■■□□ 2.883e-10■■■■□ 20.1
LAPTM4B-203ENST00000521545 TIA1P31483 386 aaKnown RBP eCLIP23.71■■□□□ 1.396e-10■□□□□ 11.1
LAPTM4B-203ENST00000521545 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP42.31■■■■■ 4.361e-8■■□□□ 11.6
LAPTM4B-203ENST00000521545 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP40.05■■■■■ 41e-8■■□□□ 13.4
LAPTM4B-203ENST00000521545 LIN28BQ6ZN17 250 aaKnown RBP eCLIP29.56■■■□□ 2.322e-8■■■■■ 27.3
LAPTM4B-203ENST00000521545 KHSRPQ92945 711 aaKnown RBP eCLIP28.93■■■□□ 2.225e-8■■■■□ 25
LAPTM4B-203ENST00000521545 RPS3P23396 243 aaKnown RBP eCLIP24.98■■□□□ 1.598e-8■■■□□ 17.2
LAPTM4B-203ENST00000521545 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP24.29■■□□□ 1.481e-7■□□□□ 11.2
LAPTM4B-203ENST00000521545 LARP4Q71RC2 724 aaKnown RBP eCLIP23.63■■□□□ 1.372e-7■■■■□ 26.1
LAPTM4B-203ENST00000521545 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP22.22■■□□□ 1.152e-7■■■■■ 27.8
LAPTM4B-203ENST00000521545 SND1Q7KZF4 910 aaKnown RBP eCLIP26.74■■□□□ 1.874e-7■■■■□ 21.6
LAPTM4B-203ENST00000521545 NONOQ15233 471 aaKnown RBP eCLIP29.27■■■□□ 2.287e-7■■■■□ 26.1
LAPTM4B-203ENST00000521545 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP25.58■■□□□ 1.691e-6■■□□□ 13.7
LAPTM4B-203ENST00000521545 PABPC4Q13310 644 aaKnown RBP eCLIP31.5■■■□□ 2.631e-6■■□□□ 12.5
LAPTM4B-203ENST00000521545 NOL12Q9UGY1 213 aaKnown RBP eCLIP23.32■■□□□ 1.322e-6■□□□□ 8.3
LAPTM4B-203ENST00000521545 SF3B1O75533 1304 aaKnown RBP eCLIP28.52■■■□□ 2.163e-6■■■■■ 137.9
LAPTM4B-203ENST00000521545 HNRNPMP52272 730 aaKnown RBP eCLIP41.34■■■■■ 4.213e-6■■■■□ 24.7
LAPTM4B-203ENST00000521545 TARDBPQ13148 414 aaKnown RBP eCLIP26.23■■□□□ 1.795e-6■■■■□ 20
LAPTM4B-203ENST00000521545 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP28.54■■■□□ 2.166e-6■■■■□ 24.2
Retrieved 24 of 24 RNA–protein pairs in 98.3 ms