RNA–Protein interactions for RNA: ENST00000520991.3

CLN8-205, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5 BASIC

Gene CLN8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-205ENST00000520991 CAMSAP1Q5T5Y3 1602 aa24.79■■□□□ 1.56
CLN8-205ENST00000520991 PTPRTO14522 1441 aa24.79■■□□□ 1.56
CLN8-205ENST00000520991 ZNF142P52746 1687 aaPredicted RBP24.78■■□□□ 1.56
CLN8-205ENST00000520991 CEP170BQ9Y4F5 1589 aaPredicted RBP24.77■■□□□ 1.56
CLN8-205ENST00000520991 WASHC2CQ9Y4E1 1318 aa24.77■■□□□ 1.56
CLN8-205ENST00000520991 PTPN23Q9H3S7 1636 aa24.73■■□□□ 1.55
CLN8-205ENST00000520991 PZPP20742 1482 aa24.72■■□□□ 1.55
CLN8-205ENST00000520991 RNF17Q9BXT8 1623 aaKnown RBP24.71■■□□□ 1.55
CLN8-205ENST00000520991 EIF2AK4Q9P2K8 1649 aaKnown RBP24.7■■□□□ 1.55
CLN8-205ENST00000520991 TNRQ92752 1358 aa24.7■■□□□ 1.54
CLN8-205ENST00000520991 A2ML1A8K2U0 1454 aa24.7■■□□□ 1.54
CLN8-205ENST00000520991 PLA2R1Q13018 1463 aa24.7■■□□□ 1.54
CLN8-205ENST00000520991 NCKAP5LQ9HCH0 1330 aa24.7■■□□□ 1.54
CLN8-205ENST00000520991 FGD6Q6ZV73 1430 aa24.69■■□□□ 1.54
CLN8-205ENST00000520991 FBXO31Q5XUX0 539 aaPredicted RBP24.69■■□□□ 1.54
CLN8-205ENST00000520991 DUOX2Q9NRD8 1548 aa24.68■■□□□ 1.54
CLN8-205ENST00000520991 SHANK2Q9UPX8 1470 aa24.68■■□□□ 1.54
CLN8-205ENST00000520991 CROCC2H7BZ55 1655 aa24.68■■□□□ 1.54
CLN8-205ENST00000520991 ABCC5O15440 1437 aa24.68■■□□□ 1.54
CLN8-205ENST00000520991 PKD2Q13563 968 aa24.66■■□□□ 1.54
CLN8-205ENST00000520991 ZC3H13Q5T200 1668 aaKnown RBP24.65■■□□□ 1.54
CLN8-205ENST00000520991 KIF15Q9NS87 1388 aa24.65■■□□□ 1.54
CLN8-205ENST00000520991 DNMT1P26358 1616 aaKnown RBP24.64■■□□□ 1.54
CLN8-205ENST00000520991 ABCC3O15438 1527 aa24.64■■□□□ 1.54
CLN8-205ENST00000520991 DAPK1P53355 1430 aa24.64■■□□□ 1.54
CLN8-205ENST00000520991 TCOF1Q13428 1488 aaKnown RBP24.64■■□□□ 1.53
CLN8-205ENST00000520991 RRP7BPQ9NSQ0 103 aa24.61■■□□□ 1.53
CLN8-205ENST00000520991 MROH1Q8NDA8 1641 aa24.61■■□□□ 1.53
CLN8-205ENST00000520991 LTBP4Q8N2S1 1624 aa24.6■■□□□ 1.53
CLN8-205ENST00000520991 ERBINQ96RT1 1412 aa24.6■■□□□ 1.53
CLN8-205ENST00000520991 NLRP1Q9C000 1473 aa24.59■■□□□ 1.53
CLN8-205ENST00000520991 CEP152O94986 1710 aa24.57■■□□□ 1.52
CLN8-205ENST00000520991 CHIC2Q9UKJ5 165 aa24.55■■□□□ 1.52
CLN8-205ENST00000520991 ANKRD30AQ9BXX3 1397 aa24.55■■□□□ 1.52
CLN8-205ENST00000520991 PRDM15P57071 1507 aaPredicted RBP24.55■■□□□ 1.52
CLN8-205ENST00000520991 SPATA31D1Q6ZQQ2 1576 aa24.55■■□□□ 1.52
CLN8-205ENST00000520991 ZNF335Q9H4Z2 1342 aaPredicted RBP24.54■■□□□ 1.52
CLN8-205ENST00000520991 UGGT1Q9NYU2 1555 aa24.54■■□□□ 1.52
CLN8-205ENST00000520991 POLR1AO95602 1720 aaPredicted RBP24.53■■□□□ 1.52
CLN8-205ENST00000520991 ERVK-7P63135 1459 aa24.53■■□□□ 1.52
CLN8-205ENST00000520991 FAM50AQ14320 339 aaKnown RBP24.53■■□□□ 1.52
CLN8-205ENST00000520991 THEMISQ8N1K5 641 aaPredicted RBP24.53■■□□□ 1.52
CLN8-205ENST00000520991 IQSEC2Q5JU85 1478 aa24.51■■□□□ 1.51
CLN8-205ENST00000520991 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.51■■□□□ 1.51
CLN8-205ENST00000520991 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.51■■□□□ 1.51
CLN8-205ENST00000520991 ANKLE2Q86XL3 938 aa24.5■■□□□ 1.51
CLN8-205ENST00000520991 DEPDC5O75140 1603 aa24.48■■□□□ 1.51
CLN8-205ENST00000520991 KANK1Q14678 1352 aa24.48■■□□□ 1.51
CLN8-205ENST00000520991 NEURL4Q96JN8 1562 aa24.48■■□□□ 1.51
CLN8-205ENST00000520991 ARHGAP31Q2M1Z3 1444 aa24.45■■□□□ 1.5
CLN8-205ENST00000520991 CFAP65Q6ZU64 1925 aaKnown RBP24.45■■□□□ 1.5
CLN8-205ENST00000520991 ADGRL2O95490 1459 aa24.45■■□□□ 1.5
CLN8-205ENST00000520991 NPHP4O75161 1426 aaPredicted RBP24.41■■□□□ 1.5
CLN8-205ENST00000520991 MED14O60244 1454 aa24.39■■□□□ 1.49
CLN8-205ENST00000520991 UBR1Q8IWV7 1749 aa24.38■■□□□ 1.49
CLN8-205ENST00000520991 LMTK2Q8IWU2 1503 aa24.38■■□□□ 1.49
CLN8-205ENST00000520991 VWDEQ8N2E2 1590 aa24.37■■□□□ 1.49
CLN8-205ENST00000520991 IQGAP1P46940 1657 aa24.36■■□□□ 1.49
CLN8-205ENST00000520991 ANKRD50Q9ULJ7 1429 aa24.36■■□□□ 1.49
CLN8-205ENST00000520991 UBAP1LF5GYI3 381 aa24.35■■□□□ 1.49
CLN8-205ENST00000520991 CPS1P31327 1500 aa24.35■■□□□ 1.49
CLN8-205ENST00000520991 EFCAB6Q5THR3 1501 aa24.32■■□□□ 1.48
CLN8-205ENST00000520991 PPARGC1BQ86YN6 1023 aaKnown RBP24.31■■□□□ 1.48
CLN8-205ENST00000520991 STAG3Q9UJ98 1225 aa24.31■■□□□ 1.48
CLN8-205ENST00000520991 SCAF11Q99590 1463 aaKnown RBP24.3■■□□□ 1.48
CLN8-205ENST00000520991 PIK3C2BO00750 1634 aa24.3■■□□□ 1.48
CLN8-205ENST00000520991 SLIT1O75093 1534 aa24.29■■□□□ 1.48
CLN8-205ENST00000520991 ARHGAP23Q9P227 1491 aa24.28■■□□□ 1.48
CLN8-205ENST00000520991 TXNDC2Q86VQ3 553 aa24.28■■□□□ 1.48
CLN8-205ENST00000520991 EID1Q9Y6B2 187 aa24.27■■□□□ 1.48
CLN8-205ENST00000520991 ROCK1Q13464 1354 aa24.26■■□□□ 1.47
CLN8-205ENST00000520991 SYNMO15061 1565 aa24.26■■□□□ 1.47
CLN8-205ENST00000520991 LTKP29376 864 aa24.25■■□□□ 1.47
CLN8-205ENST00000520991 ITGAEP38570 1179 aa24.25■■□□□ 1.47
CLN8-205ENST00000520991 IDI1Q13907 227 aa24.25■■□□□ 1.47
CLN8-205ENST00000520991 NOS1P29475 1434 aa24.25■■□□□ 1.47
CLN8-205ENST00000520991 TMEM2Q9UHN6 1383 aa24.23■■□□□ 1.47
CLN8-205ENST00000520991 KDM5AP29375 1690 aaKnown RBP24.23■■□□□ 1.47
CLN8-205ENST00000520991 RPRD2Q5VT52 1461 aaKnown RBP24.23■■□□□ 1.47
CLN8-205ENST00000520991 UNC13BO14795 1591 aa24.23■■□□□ 1.47
CLN8-205ENST00000520991 TET3O43151 1660 aa24.22■■□□□ 1.47
CLN8-205ENST00000520991 SCAF1Q9H7N4 1312 aaKnown RBP24.21■■□□□ 1.47
CLN8-205ENST00000520991 TOM1O60784 492 aa24.2■■□□□ 1.46
CLN8-205ENST00000520991 SLC52A1Q9NWF4 448 aa24.2■■□□□ 1.46
CLN8-205ENST00000520991 ADGRB3O60242 1522 aa24.19■■□□□ 1.46
CLN8-205ENST00000520991 PIP4K2BP78356 416 aa24.18■■□□□ 1.46
CLN8-205ENST00000520991 GCC2Q8IWJ2 1684 aa24.18■■□□□ 1.46
CLN8-205ENST00000520991 STRCP1A6NGW2 1772 aa24.18■■□□□ 1.46
CLN8-205ENST00000520991 DISP3Q9P2K9 1392 aa24.17■■□□□ 1.46
CLN8-205ENST00000520991 LRRC7Q96NW7 1537 aa24.15■■□□□ 1.46
CLN8-205ENST00000520991 IQGAP3Q86VI3 1631 aa24.13■■□□□ 1.45
CLN8-205ENST00000520991 NUP155O75694 1391 aa24.11■■□□□ 1.45
CLN8-205ENST00000520991 E9PCH4 1651 aa24.1■■□□□ 1.45
CLN8-205ENST00000520991 BCANQ96GW7 911 aa24.08■■□□□ 1.44
CLN8-205ENST00000520991 RRBP1Q9P2E9 1410 aaKnown RBP24.07■■□□□ 1.44
CLN8-205ENST00000520991 HSPA1LP34931 641 aa24.07■■□□□ 1.44
CLN8-205ENST00000520991 CHGAP10645 457 aaKnown RBP24.06■■□□□ 1.44
CLN8-205ENST00000520991 SLC26A8Q96RN1 970 aa24.06■■□□□ 1.44
CLN8-205ENST00000520991 MYO5BQ9ULV0 1848 aa24.05■■□□□ 1.44
CLN8-205ENST00000520991 TMEM131LA2VDJ0 1609 aa24.05■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms