RNA–Protein interactions for RNA: ENST00000520991.3

CLN8-205, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5 BASIC

Gene CLN8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-205ENST00000520991 NISCHQ9Y2I1 1504 aa39.22■■■■□ 3.87
CLN8-205ENST00000520991 CCDC180Q9P1Z9 1646 aa35.11■■■■□ 3.21
CLN8-205ENST00000520991 ABCC9O60706 1549 aa34.88■■■■□ 3.17
CLN8-205ENST00000520991 RB1CC1Q8TDY2 1594 aa33.32■■■□□ 2.92
CLN8-205ENST00000520991 NACADO15069 1562 aa33.14■■■□□ 2.9
CLN8-205ENST00000520991 DCAF8L2P0C7V8 631 aa33.05■■■□□ 2.88
CLN8-205ENST00000520991 MYO15BQ96JP2 1530 aa32.74■■■□□ 2.83
CLN8-205ENST00000520991 ZCCHC6Q5VYS8 1495 aaKnown RBP32.56■■■□□ 2.8
CLN8-205ENST00000520991 UNC13AQ9UPW8 1703 aa32.52■■■□□ 2.8
CLN8-205ENST00000520991 PABPN1Q86U42 306 aaKnown RBP eCLIP32.51■■■□□ 2.79
CLN8-205ENST00000520991 DNAJC5BQ9UF47 199 aa32.44■■■□□ 2.78
CLN8-205ENST00000520991 DCAF1Q9Y4B6 1507 aa32.41■■■□□ 2.78
CLN8-205ENST00000520991 BICRAQ9NZM4 1560 aa32.29■■■□□ 2.76
CLN8-205ENST00000520991 SCRIBQ14160 1630 aa32.03■■■□□ 2.72
CLN8-205ENST00000520991 SHROOM4Q9ULL8 1493 aa31.92■■■□□ 2.7
CLN8-205ENST00000520991 CC2D2AQ9P2K1 1620 aa31.51■■■□□ 2.64
CLN8-205ENST00000520991 EIF4G1Q04637 1599 aaKnown RBP31.51■■■□□ 2.63
CLN8-205ENST00000520991 CECR2Q9BXF3 1484 aa31.4■■■□□ 2.62
CLN8-205ENST00000520991 SMARCA4P51532 1647 aa30.56■■■□□ 2.48
CLN8-205ENST00000520991 NCAPD3P42695 1498 aa30.56■■■□□ 2.48
CLN8-205ENST00000520991 ATAD2BQ9ULI0 1458 aa30.52■■■□□ 2.48
CLN8-205ENST00000520991 SMARCA2P51531 1590 aa30.47■■■□□ 2.47
CLN8-205ENST00000520991 BAZ1AQ9NRL2 1556 aaPredicted RBP30.45■■■□□ 2.47
CLN8-205ENST00000520991 HMGXB3Q12766 1538 aa30.39■■■□□ 2.45
CLN8-205ENST00000520991 BAZ1BQ9UIG0 1483 aaKnown RBP30.27■■■□□ 2.44
CLN8-205ENST00000520991 PEG3Q9GZU2 1588 aa30.23■■■□□ 2.43
CLN8-205ENST00000520991 MROH2BQ7Z745 1585 aa30.22■■■□□ 2.43
CLN8-205ENST00000520991 ERCC6Q03468 1493 aa30.14■■■□□ 2.42
CLN8-205ENST00000520991 NESP48681 1621 aa30.02■■■□□ 2.4
CLN8-205ENST00000520991 CUX2O14529 1486 aa29.97■■■□□ 2.39
CLN8-205ENST00000520991 WIZO95785 1651 aa29.88■■■□□ 2.37
CLN8-205ENST00000520991 LAMC3Q9Y6N6 1575 aa29.87■■■□□ 2.37
CLN8-205ENST00000520991 PDS5BQ9NTI5 1447 aa29.7■■■□□ 2.34
CLN8-205ENST00000520991 RSF1Q96T23 1441 aaPredicted RBP29.68■■■□□ 2.34
CLN8-205ENST00000520991 THOC2Q8NI27 1593 aaKnown RBP29.67■■■□□ 2.34
CLN8-205ENST00000520991 CADPSQ9ULU8 1353 aa29.66■■■□□ 2.34
CLN8-205ENST00000520991 KIF21AQ7Z4S6 1674 aa29.64■■■□□ 2.34
CLN8-205ENST00000520991 DNAJC5Q9H3Z4 198 aa29.64■■■□□ 2.34
CLN8-205ENST00000520991 TOP2AP11388 1531 aaKnown RBP29.53■■■□□ 2.32
CLN8-205ENST00000520991 MRC2Q9UBG0 1479 aa29.42■■■□□ 2.3
CLN8-205ENST00000520991 CFTRP13569 1480 aa29.37■■■□□ 2.29
CLN8-205ENST00000520991 CEP164Q9UPV0 1460 aa29.37■■■□□ 2.29
CLN8-205ENST00000520991 FANCD2Q9BXW9 1451 aa29.34■■■□□ 2.29
CLN8-205ENST00000520991 WDR62O43379 1518 aa29.32■■■□□ 2.28
CLN8-205ENST00000520991 CCDC88BA6NC98 1476 aa29.18■■■□□ 2.26
CLN8-205ENST00000520991 PRDM2Q13029 1718 aa29.11■■■□□ 2.25
CLN8-205ENST00000520991 URB2Q14146 1524 aaKnown RBP29.07■■■□□ 2.24
CLN8-205ENST00000520991 TOPBP1Q92547 1522 aa28.8■■■□□ 2.2
CLN8-205ENST00000520991 ABCC8Q09428 1581 aa28.77■■■□□ 2.2
CLN8-205ENST00000520991 IFT140Q96RY7 1462 aa28.75■■■□□ 2.19
CLN8-205ENST00000520991 DNMBPQ6XZF7 1577 aa28.73■■■□□ 2.19
CLN8-205ENST00000520991 ZNF608Q9ULD9 1512 aaPredicted RBP28.66■■■□□ 2.18
CLN8-205ENST00000520991 OSCARQ8IYS5 282 aa28.64■■■□□ 2.17
CLN8-205ENST00000520991 SUPT5HO00267 1087 aaKnown RBP28.6■■■□□ 2.17
CLN8-205ENST00000520991 EIF4G3O43432 1585 aaKnown RBP28.54■■■□□ 2.16
CLN8-205ENST00000520991 POLA1P09884 1462 aaPredicted RBP28.53■■■□□ 2.16
CLN8-205ENST00000520991 TARBP1Q13395 1621 aaKnown RBP28.52■■■□□ 2.16
CLN8-205ENST00000520991 TRIM41Q8WV44 630 aa28.5■■■□□ 2.15
CLN8-205ENST00000520991 AQRO60306 1485 aaKnown RBP eCLIP28.45■■■□□ 2.14
CLN8-205ENST00000520991 RAD54L2Q9Y4B4 1467 aa28.41■■■□□ 2.14
CLN8-205ENST00000520991 SOGA1O94964 1423 aa28.41■■■□□ 2.14
CLN8-205ENST00000520991 CUX1P39880 1505 aa28.39■■■□□ 2.14
CLN8-205ENST00000520991 FGD5Q6ZNL6 1462 aa28.39■■■□□ 2.14
CLN8-205ENST00000520991 TDRD9Q8NDG6 1382 aaKnown RBP28.31■■■□□ 2.12
CLN8-205ENST00000520991 CHD1O14646 1710 aa28.28■■■□□ 2.12
CLN8-205ENST00000520991 WDR97A6NE52 1622 aa28.27■■■□□ 2.12
CLN8-205ENST00000520991 FBLN2P98095 1184 aa28.26■■■□□ 2.11
CLN8-205ENST00000520991 RIMBP3CA6NJZ7 1639 aa28.24■■■□□ 2.11
CLN8-205ENST00000520991 RIMBP3BA6NNM3 1639 aa28.24■■■□□ 2.11
CLN8-205ENST00000520991 RIMBP3Q9UFD9 1639 aa28.24■■■□□ 2.11
CLN8-205ENST00000520991 SNAPC4Q5SXM2 1469 aa28.19■■■□□ 2.1
CLN8-205ENST00000520991 ARHGEF11O15085 1522 aa28.17■■■□□ 2.1
CLN8-205ENST00000520991 GRIN2BQ13224 1484 aa28.14■■■□□ 2.1
CLN8-205ENST00000520991 MAGI1Q96QZ7 1491 aaPredicted RBP28.11■■■□□ 2.09
CLN8-205ENST00000520991 CHMP7Q8WUX9 453 aaPredicted RBP28.08■■■□□ 2.09
CLN8-205ENST00000520991 GAPVD1Q14C86 1478 aa28.07■■■□□ 2.08
CLN8-205ENST00000520991 ABCA10Q8WWZ4 1543 aa28.07■■■□□ 2.08
CLN8-205ENST00000520991 PBRM1Q86U86 1689 aa28.05■■■□□ 2.08
CLN8-205ENST00000520991 WRNQ14191 1432 aaPredicted RBP eCLIP28.03■■■□□ 2.08
CLN8-205ENST00000520991 SYNJ2O15056 1496 aa28.01■■■□□ 2.08
CLN8-205ENST00000520991 ABCA5Q8WWZ7 1642 aa28.01■■■□□ 2.07
CLN8-205ENST00000520991 TOP2BQ02880 1626 aa28■■■□□ 2.07
CLN8-205ENST00000520991 BIVM-ERCC5R4GMW8 1640 aa28■■■□□ 2.07
CLN8-205ENST00000520991 SYNJ1O43426 1573 aa27.99■■■□□ 2.07
CLN8-205ENST00000520991 CYB5RLQ6IPT4 315 aa27.96■■■□□ 2.07
CLN8-205ENST00000520991 CLASP1Q7Z460 1538 aa27.95■■■□□ 2.06
CLN8-205ENST00000520991 ARAP1Q96P48 1450 aa27.91■■■□□ 2.06
CLN8-205ENST00000520991 ADAMTS12P58397 1594 aa27.79■■■□□ 2.04
CLN8-205ENST00000520991 GRIN2AQ12879 1464 aa27.77■■■□□ 2.04
CLN8-205ENST00000520991 ERICH3Q5RHP9 1530 aa27.73■■■□□ 2.03
CLN8-205ENST00000520991 FHAD1B1AJZ9 1412 aa27.72■■■□□ 2.03
CLN8-205ENST00000520991 NUP160Q12769 1436 aa27.65■■■□□ 2.02
CLN8-205ENST00000520991 CEP170Q5SW79 1584 aa27.65■■■□□ 2.02
CLN8-205ENST00000520991 TRHP20396 242 aaPredicted RBP27.6■■■□□ 2.01
CLN8-205ENST00000520991 ERCC6L2Q5T890 1561 aa27.53■■■□□ 2
CLN8-205ENST00000520991 SHROOM2Q13796 1616 aa27.5■■□□□ 1.99
CLN8-205ENST00000520991 KIF27Q86VH2 1401 aa27.49■■□□□ 1.99
CLN8-205ENST00000520991 IGF1RP08069 1367 aa27.41■■□□□ 1.98
CLN8-205ENST00000520991 RUSC2Q8N2Y8 1516 aa27.4■■□□□ 1.98
CLN8-205ENST00000520991 CUL7Q14999 1698 aa27.39■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms