RNA–Protein interactions for RNA: ENST00000520913.1

PVT1-209, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 584 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-209ENST00000520913 CEP152O94986 1710 aa16.9■□□□□ 0.3
PVT1-209ENST00000520913 CAMSAP1Q5T5Y3 1602 aa16.89■□□□□ 0.29
PVT1-209ENST00000520913 PTPRKQ15262 1439 aa16.89■□□□□ 0.29
PVT1-209ENST00000520913 PPP6R1Q9UPN7 881 aa16.89■□□□□ 0.29
PVT1-209ENST00000520913 POLR1AO95602 1720 aaPredicted RBP16.88■□□□□ 0.29
PVT1-209ENST00000520913 TSPY4P0CV99 314 aa16.88■□□□□ 0.29
PVT1-209ENST00000520913 TSPY10P0CW01 314 aa16.88■□□□□ 0.29
PVT1-209ENST00000520913 MROH1Q8NDA8 1641 aa16.87■□□□□ 0.29
PVT1-209ENST00000520913 NCOA1Q15788 1441 aa16.87■□□□□ 0.29
PVT1-209ENST00000520913 PZPP20742 1482 aa16.86■□□□□ 0.29
PVT1-209ENST00000520913 TCOF1Q13428 1488 aaKnown RBP16.86■□□□□ 0.29
PVT1-209ENST00000520913 DUOX2Q9NRD8 1548 aa16.86■□□□□ 0.29
PVT1-209ENST00000520913 FGD6Q6ZV73 1430 aa16.86■□□□□ 0.29
PVT1-209ENST00000520913 KIF3BO15066 747 aa16.84■□□□□ 0.29
PVT1-209ENST00000520913 PTPRTO14522 1441 aa16.84■□□□□ 0.29
PVT1-209ENST00000520913 PLA2R1Q13018 1463 aa16.84■□□□□ 0.29
PVT1-209ENST00000520913 DEPDC5O75140 1603 aa16.83■□□□□ 0.28
PVT1-209ENST00000520913 PRDM15P57071 1507 aaPredicted RBP16.83■□□□□ 0.28
PVT1-209ENST00000520913 FBXO41Q8TF61 875 aa16.83■□□□□ 0.28
PVT1-209ENST00000520913 DMRT2Q9Y5R5 561 aa16.83■□□□□ 0.28
PVT1-209ENST00000520913 ABCC3O15438 1527 aa16.82■□□□□ 0.28
PVT1-209ENST00000520913 A2ML1A8K2U0 1454 aa16.82■□□□□ 0.28
PVT1-209ENST00000520913 DAPK1P53355 1430 aa16.81■□□□□ 0.28
PVT1-209ENST00000520913 ABCC5O15440 1437 aa16.79■□□□□ 0.28
PVT1-209ENST00000520913 ERBINQ96RT1 1412 aa16.79■□□□□ 0.28
PVT1-209ENST00000520913 SPATA31D1Q6ZQQ2 1576 aa16.78■□□□□ 0.28
PVT1-209ENST00000520913 CFAP65Q6ZU64 1925 aaKnown RBP16.78■□□□□ 0.28
PVT1-209ENST00000520913 KIF15Q9NS87 1388 aa16.77■□□□□ 0.28
PVT1-209ENST00000520913 WASHC2CQ9Y4E1 1318 aa16.77■□□□□ 0.28
PVT1-209ENST00000520913 TNRQ92752 1358 aa16.77■□□□□ 0.27
PVT1-209ENST00000520913 NLRP1Q9C000 1473 aa16.76■□□□□ 0.27
PVT1-209ENST00000520913 LTBP4Q8N2S1 1624 aa16.75■□□□□ 0.27
PVT1-209ENST00000520913 CERKQ8TCT0 537 aa16.74■□□□□ 0.27
PVT1-209ENST00000520913 ADGRL2O95490 1459 aa16.73■□□□□ 0.27
PVT1-209ENST00000520913 NEURL4Q96JN8 1562 aa16.73■□□□□ 0.27
PVT1-209ENST00000520913 UGGT1Q9NYU2 1555 aa16.73■□□□□ 0.27
PVT1-209ENST00000520913 UBR1Q8IWV7 1749 aa16.73■□□□□ 0.27
PVT1-209ENST00000520913 ERVK-7P63135 1459 aa16.73■□□□□ 0.27
PVT1-209ENST00000520913 IQSEC2Q5JU85 1478 aa16.72■□□□□ 0.27
PVT1-209ENST00000520913 ANKRD30AQ9BXX3 1397 aa16.7■□□□□ 0.26
PVT1-209ENST00000520913 PKD2Q13563 968 aa16.7■□□□□ 0.26
PVT1-209ENST00000520913 VWDEQ8N2E2 1590 aa16.69■□□□□ 0.26
PVT1-209ENST00000520913 FBXO31Q5XUX0 539 aaPredicted RBP16.69■□□□□ 0.26
PVT1-209ENST00000520913 IQGAP1P46940 1657 aa16.69■□□□□ 0.26
PVT1-209ENST00000520913 NCKAP5LQ9HCH0 1330 aa16.68■□□□□ 0.26
PVT1-209ENST00000520913 LMTK2Q8IWU2 1503 aa16.67■□□□□ 0.26
PVT1-209ENST00000520913 KDM5AP29375 1690 aaKnown RBP16.67■□□□□ 0.26
PVT1-209ENST00000520913 ARHGAP31Q2M1Z3 1444 aa16.67■□□□□ 0.26
PVT1-209ENST00000520913 EFCAB6Q5THR3 1501 aa16.66■□□□□ 0.26
PVT1-209ENST00000520913 RRP7BPQ9NSQ0 103 aa16.66■□□□□ 0.26
PVT1-209ENST00000520913 GCC2Q8IWJ2 1684 aa16.65■□□□□ 0.26
PVT1-209ENST00000520913 KANK1Q14678 1352 aa16.65■□□□□ 0.26
PVT1-209ENST00000520913 PIK3C2BO00750 1634 aa16.65■□□□□ 0.26
PVT1-209ENST00000520913 UNC13BO14795 1591 aa16.64■□□□□ 0.25
PVT1-209ENST00000520913 TET3O43151 1660 aa16.63■□□□□ 0.25
PVT1-209ENST00000520913 FAM50AQ14320 339 aaKnown RBP16.62■□□□□ 0.25
PVT1-209ENST00000520913 CHIC2Q9UKJ5 165 aa16.62■□□□□ 0.25
PVT1-209ENST00000520913 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.62■□□□□ 0.25
PVT1-209ENST00000520913 MED14O60244 1454 aa16.61■□□□□ 0.25
PVT1-209ENST00000520913 SYNMO15061 1565 aa16.6■□□□□ 0.25
PVT1-209ENST00000520913 THEMISQ8N1K5 641 aaPredicted RBP16.6■□□□□ 0.25
PVT1-209ENST00000520913 ZNF335Q9H4Z2 1342 aaPredicted RBP16.6■□□□□ 0.25
PVT1-209ENST00000520913 CPS1P31327 1500 aa16.6■□□□□ 0.25
PVT1-209ENST00000520913 ANKRD50Q9ULJ7 1429 aa16.59■□□□□ 0.25
PVT1-209ENST00000520913 NPHP4O75161 1426 aaPredicted RBP16.58■□□□□ 0.24
PVT1-209ENST00000520913 SLIT1O75093 1534 aa16.58■□□□□ 0.24
PVT1-209ENST00000520913 MYO5BQ9ULV0 1848 aa16.57■□□□□ 0.24
PVT1-209ENST00000520913 IQGAP3Q86VI3 1631 aa16.57■□□□□ 0.24
PVT1-209ENST00000520913 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.57■□□□□ 0.249e-7■■■■□ 19.8
PVT1-209ENST00000520913 STRCP1A6NGW2 1772 aa16.56■□□□□ 0.24
PVT1-209ENST00000520913 ADGRB3O60242 1522 aa16.56■□□□□ 0.24
PVT1-209ENST00000520913 RPRD2Q5VT52 1461 aaKnown RBP16.56■□□□□ 0.24
PVT1-209ENST00000520913 ANKLE2Q86XL3 938 aa16.56■□□□□ 0.24
PVT1-209ENST00000520913 SCAF11Q99590 1463 aaKnown RBP16.55■□□□□ 0.24
PVT1-209ENST00000520913 ARHGAP23Q9P227 1491 aa16.55■□□□□ 0.24
PVT1-209ENST00000520913 E9PCH4 1651 aa16.55■□□□□ 0.24
PVT1-209ENST00000520913 ROCK1Q13464 1354 aa16.54■□□□□ 0.24
PVT1-209ENST00000520913 NOS1P29475 1434 aa16.53■□□□□ 0.24
PVT1-209ENST00000520913 SPHKAPQ2M3C7 1700 aa16.48■□□□□ 0.23
PVT1-209ENST00000520913 XIRP1Q702N8 1843 aaKnown RBP16.47■□□□□ 0.23
PVT1-209ENST00000520913 RRBP1Q9P2E9 1410 aaKnown RBP16.46■□□□□ 0.23
PVT1-209ENST00000520913 TMEM131LA2VDJ0 1609 aa16.46■□□□□ 0.23
PVT1-209ENST00000520913 TMEM2Q9UHN6 1383 aa16.45■□□□□ 0.22
PVT1-209ENST00000520913 PPARGC1BQ86YN6 1023 aaKnown RBP16.44■□□□□ 0.22
PVT1-209ENST00000520913 UBAP1LF5GYI3 381 aa16.43■□□□□ 0.22
PVT1-209ENST00000520913 STAG3Q9UJ98 1225 aa16.43■□□□□ 0.22
PVT1-209ENST00000520913 EID1Q9Y6B2 187 aa16.43■□□□□ 0.22
PVT1-209ENST00000520913 LRRC7Q96NW7 1537 aa16.42■□□□□ 0.22
PVT1-209ENST00000520913 ITGAEP38570 1179 aa16.41■□□□□ 0.22
PVT1-209ENST00000520913 IDI1Q13907 227 aa16.41■□□□□ 0.22
PVT1-209ENST00000520913 SLC52A1Q9NWF4 448 aa16.41■□□□□ 0.22
PVT1-209ENST00000520913 NWD1Q149M9 1564 aa16.41■□□□□ 0.22
PVT1-209ENST00000520913 ALKQ9UM73 1620 aa16.41■□□□□ 0.22
PVT1-209ENST00000520913 LTKP29376 864 aa16.4■□□□□ 0.22
PVT1-209ENST00000520913 TXNDC2Q86VQ3 553 aa16.4■□□□□ 0.22
PVT1-209ENST00000520913 CHD2O14647 1828 aaKnown RBP16.38■□□□□ 0.21
PVT1-209ENST00000520913 ZFYVE9O95405 1425 aa16.37■□□□□ 0.21
PVT1-209ENST00000520913 NUP155O75694 1391 aa16.37■□□□□ 0.21
PVT1-209ENST00000520913 KIF1BO60333 1816 aa16.36■□□□□ 0.21
PVT1-209ENST00000520913 DIP2AQ14689 1571 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms