RNA–Protein interactions for RNA: ENST00000519482.1

TRAPPC9-206, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-206ENST00000519482 KIF3BO15066 747 aa19.59■□□□□ 0.73
TRAPPC9-206ENST00000519482 KDM5DQ9BY66 1539 aa19.58■□□□□ 0.73
TRAPPC9-206ENST00000519482 CEP170BQ9Y4F5 1589 aaPredicted RBP19.57■□□□□ 0.72
TRAPPC9-206ENST00000519482 APLP2Q06481 763 aa19.56■□□□□ 0.72
TRAPPC9-206ENST00000519482 EIF2AK4Q9P2K8 1649 aaKnown RBP19.54■□□□□ 0.72
TRAPPC9-206ENST00000519482 PLA2R1Q13018 1463 aa19.54■□□□□ 0.72
TRAPPC9-206ENST00000519482 RNF17Q9BXT8 1623 aaKnown RBP19.54■□□□□ 0.72
TRAPPC9-206ENST00000519482 PZPP20742 1482 aa19.53■□□□□ 0.72
TRAPPC9-206ENST00000519482 WASHC2CQ9Y4E1 1318 aa19.52■□□□□ 0.72
TRAPPC9-206ENST00000519482 A2ML1A8K2U0 1454 aa19.51■□□□□ 0.71
TRAPPC9-206ENST00000519482 CROCC2H7BZ55 1655 aa19.51■□□□□ 0.71
TRAPPC9-206ENST00000519482 ZC3H13Q5T200 1668 aaKnown RBP19.51■□□□□ 0.71
TRAPPC9-206ENST00000519482 DNMT1P26358 1616 aaKnown RBP19.5■□□□□ 0.71
TRAPPC9-206ENST00000519482 PTPN23Q9H3S7 1636 aa19.5■□□□□ 0.71
TRAPPC9-206ENST00000519482 TCOF1Q13428 1488 aaKnown RBP19.49■□□□□ 0.71
TRAPPC9-206ENST00000519482 LTBP4Q8N2S1 1624 aa19.49■□□□□ 0.71
TRAPPC9-206ENST00000519482 PKD2Q13563 968 aa19.48■□□□□ 0.71
TRAPPC9-206ENST00000519482 SHANK2Q9UPX8 1470 aa19.48■□□□□ 0.71
TRAPPC9-206ENST00000519482 TNRQ92752 1358 aa19.47■□□□□ 0.71
TRAPPC9-206ENST00000519482 DUOX2Q9NRD8 1548 aa19.47■□□□□ 0.71
TRAPPC9-206ENST00000519482 NCKAP5LQ9HCH0 1330 aa19.47■□□□□ 0.71
TRAPPC9-206ENST00000519482 FBXO31Q5XUX0 539 aaPredicted RBP19.46■□□□□ 0.71
TRAPPC9-206ENST00000519482 IQSEC2Q5JU85 1478 aa19.45■□□□□ 0.7
TRAPPC9-206ENST00000519482 POLR1AO95602 1720 aaPredicted RBP19.45■□□□□ 0.7
TRAPPC9-206ENST00000519482 MROH1Q8NDA8 1641 aa19.44■□□□□ 0.7
TRAPPC9-206ENST00000519482 ABCC3O15438 1527 aa19.44■□□□□ 0.7
TRAPPC9-206ENST00000519482 FGD6Q6ZV73 1430 aa19.43■□□□□ 0.7
TRAPPC9-206ENST00000519482 ABCC5O15440 1437 aa19.42■□□□□ 0.7
TRAPPC9-206ENST00000519482 CEP152O94986 1710 aa19.42■□□□□ 0.7
TRAPPC9-206ENST00000519482 NLRP1Q9C000 1473 aa19.42■□□□□ 0.7
TRAPPC9-206ENST00000519482 DAPK1P53355 1430 aa19.41■□□□□ 0.7
TRAPPC9-206ENST00000519482 KIF15Q9NS87 1388 aa19.4■□□□□ 0.7
TRAPPC9-206ENST00000519482 ERBINQ96RT1 1412 aa19.4■□□□□ 0.7
TRAPPC9-206ENST00000519482 SPATA31D1Q6ZQQ2 1576 aa19.4■□□□□ 0.7
TRAPPC9-206ENST00000519482 PRDM15P57071 1507 aaPredicted RBP19.38■□□□□ 0.69
TRAPPC9-206ENST00000519482 CFAP65Q6ZU64 1925 aaKnown RBP19.38■□□□□ 0.69
TRAPPC9-206ENST00000519482 UGGT1Q9NYU2 1555 aa19.38■□□□□ 0.69
TRAPPC9-206ENST00000519482 DEPDC5O75140 1603 aa19.37■□□□□ 0.69
TRAPPC9-206ENST00000519482 THEMISQ8N1K5 641 aaPredicted RBP19.37■□□□□ 0.69
TRAPPC9-206ENST00000519482 NEURL4Q96JN8 1562 aa19.36■□□□□ 0.69
TRAPPC9-206ENST00000519482 ZNF335Q9H4Z2 1342 aaPredicted RBP19.36■□□□□ 0.69
TRAPPC9-206ENST00000519482 ERVK-7P63135 1459 aa19.35■□□□□ 0.69
TRAPPC9-206ENST00000519482 RRP7BPQ9NSQ0 103 aa19.35■□□□□ 0.69
TRAPPC9-206ENST00000519482 ANKRD30AQ9BXX3 1397 aa19.33■□□□□ 0.69
TRAPPC9-206ENST00000519482 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.33■□□□□ 0.69
TRAPPC9-206ENST00000519482 ANKLE2Q86XL3 938 aa19.33■□□□□ 0.68
TRAPPC9-206ENST00000519482 ARHGAP31Q2M1Z3 1444 aa19.33■□□□□ 0.68
TRAPPC9-206ENST00000519482 MED14O60244 1454 aa19.31■□□□□ 0.68
TRAPPC9-206ENST00000519482 UBR1Q8IWV7 1749 aa19.3■□□□□ 0.68
TRAPPC9-206ENST00000519482 ADGRL2O95490 1459 aa19.29■□□□□ 0.68
TRAPPC9-206ENST00000519482 CHIC2Q9UKJ5 165 aa19.29■□□□□ 0.68
TRAPPC9-206ENST00000519482 KANK1Q14678 1352 aa19.29■□□□□ 0.68
TRAPPC9-206ENST00000519482 IQGAP1P46940 1657 aa19.27■□□□□ 0.68
TRAPPC9-206ENST00000519482 CPS1P31327 1500 aa19.27■□□□□ 0.68
TRAPPC9-206ENST00000519482 LMTK2Q8IWU2 1503 aa19.27■□□□□ 0.68
TRAPPC9-206ENST00000519482 VWDEQ8N2E2 1590 aa19.27■□□□□ 0.67
TRAPPC9-206ENST00000519482 NPHP4O75161 1426 aaPredicted RBP19.26■□□□□ 0.67
TRAPPC9-206ENST00000519482 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.25■□□□□ 0.67
TRAPPC9-206ENST00000519482 FAM50AQ14320 339 aaKnown RBP19.24■□□□□ 0.67
TRAPPC9-206ENST00000519482 KDM5AP29375 1690 aaKnown RBP19.22■□□□□ 0.67
TRAPPC9-206ENST00000519482 UBAP1LF5GYI3 381 aa19.21■□□□□ 0.67
TRAPPC9-206ENST00000519482 PIK3C2BO00750 1634 aa19.21■□□□□ 0.67
TRAPPC9-206ENST00000519482 SLIT1O75093 1534 aa19.2■□□□□ 0.66
TRAPPC9-206ENST00000519482 ARHGAP23Q9P227 1491 aa19.2■□□□□ 0.66
TRAPPC9-206ENST00000519482 EFCAB6Q5THR3 1501 aa19.2■□□□□ 0.66
TRAPPC9-206ENST00000519482 ANKRD50Q9ULJ7 1429 aa19.19■□□□□ 0.66
TRAPPC9-206ENST00000519482 SCAF11Q99590 1463 aaKnown RBP19.18■□□□□ 0.66
TRAPPC9-206ENST00000519482 STRCP1A6NGW2 1772 aa19.16■□□□□ 0.66
TRAPPC9-206ENST00000519482 SYNMO15061 1565 aa19.15■□□□□ 0.66
TRAPPC9-206ENST00000519482 NOS1P29475 1434 aa19.15■□□□□ 0.66
TRAPPC9-206ENST00000519482 RPRD2Q5VT52 1461 aaKnown RBP19.14■□□□□ 0.65
TRAPPC9-206ENST00000519482 TET3O43151 1660 aa19.14■□□□□ 0.65
TRAPPC9-206ENST00000519482 TXNDC2Q86VQ3 553 aa19.13■□□□□ 0.65
TRAPPC9-206ENST00000519482 EID1Q9Y6B2 187 aa19.13■□□□□ 0.65
TRAPPC9-206ENST00000519482 UNC13BO14795 1591 aa19.13■□□□□ 0.65
TRAPPC9-206ENST00000519482 GCC2Q8IWJ2 1684 aa19.13■□□□□ 0.65
TRAPPC9-206ENST00000519482 ROCK1Q13464 1354 aa19.12■□□□□ 0.65
TRAPPC9-206ENST00000519482 TMEM2Q9UHN6 1383 aa19.12■□□□□ 0.65
TRAPPC9-206ENST00000519482 TOM1O60784 492 aa19.12■□□□□ 0.65
TRAPPC9-206ENST00000519482 LTKP29376 864 aa19.12■□□□□ 0.65
TRAPPC9-206ENST00000519482 STAG3Q9UJ98 1225 aa19.12■□□□□ 0.65
TRAPPC9-206ENST00000519482 IDI1Q13907 227 aa19.11■□□□□ 0.65
TRAPPC9-206ENST00000519482 DISP3Q9P2K9 1392 aa19.1■□□□□ 0.65
TRAPPC9-206ENST00000519482 SLC52A1Q9NWF4 448 aa19.1■□□□□ 0.65
TRAPPC9-206ENST00000519482 ADGRB3O60242 1522 aa19.1■□□□□ 0.65
TRAPPC9-206ENST00000519482 LRRC7Q96NW7 1537 aa19.09■□□□□ 0.65
TRAPPC9-206ENST00000519482 IQGAP3Q86VI3 1631 aa19.06■□□□□ 0.64
TRAPPC9-206ENST00000519482 MYO5BQ9ULV0 1848 aa19.05■□□□□ 0.64
TRAPPC9-206ENST00000519482 E9PCH4 1651 aa19.05■□□□□ 0.64
TRAPPC9-206ENST00000519482 ALKQ9UM73 1620 aa19.04■□□□□ 0.64
TRAPPC9-206ENST00000519482 PIP4K2BP78356 416 aa19.04■□□□□ 0.64
TRAPPC9-206ENST00000519482 XIRP1Q702N8 1843 aaKnown RBP19.04■□□□□ 0.64
TRAPPC9-206ENST00000519482 SCAF1Q9H7N4 1312 aaKnown RBP19.03■□□□□ 0.64
TRAPPC9-206ENST00000519482 TMEM131LA2VDJ0 1609 aa19.01■□□□□ 0.63
TRAPPC9-206ENST00000519482 PPARGC1BQ86YN6 1023 aaKnown RBP19■□□□□ 0.63
TRAPPC9-206ENST00000519482 HSPA1LP34931 641 aa18.99■□□□□ 0.63
TRAPPC9-206ENST00000519482 ITGAEP38570 1179 aa18.99■□□□□ 0.63
TRAPPC9-206ENST00000519482 NUP155O75694 1391 aa18.97■□□□□ 0.63
TRAPPC9-206ENST00000519482 HDGFP51858 240 aaKnown RBP18.97■□□□□ 0.63
TRAPPC9-206ENST00000519482 ZFYVE9O95405 1425 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms