RNA–Protein interactions for RNA: ENST00000518607.1

EFCAB2-214, Transcript of EF-hand calcium binding domain 2, humanhuman

TSL 4

Gene EFCAB2, Length 473 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB2-214ENST00000518607 DMRT2Q9Y5R5 561 aa34.67■■■■□ 3.14
EFCAB2-214ENST00000518607 RNF17Q9BXT8 1623 aaKnown RBP34.66■■■■□ 3.14
EFCAB2-214ENST00000518607 SHANK2Q9UPX8 1470 aa34.65■■■■□ 3.14
EFCAB2-214ENST00000518607 NCOA1Q15788 1441 aa34.64■■■■□ 3.14
EFCAB2-214ENST00000518607 FGD6Q6ZV73 1430 aa34.64■■■■□ 3.14
EFCAB2-214ENST00000518607 FBXO41Q8TF61 875 aa34.64■■■■□ 3.14
EFCAB2-214ENST00000518607 CEP170BQ9Y4F5 1589 aaPredicted RBP34.64■■■■□ 3.14
EFCAB2-214ENST00000518607 CAMSAP1Q5T5Y3 1602 aa34.62■■■■□ 3.13
EFCAB2-214ENST00000518607 TCOF1Q13428 1488 aaKnown RBP34.61■■■■□ 3.13
EFCAB2-214ENST00000518607 PZPP20742 1482 aa34.6■■■■□ 3.13
EFCAB2-214ENST00000518607 DNMT1P26358 1616 aaKnown RBP34.6■■■■□ 3.13
EFCAB2-214ENST00000518607 DUOX2Q9NRD8 1548 aa34.6■■■■□ 3.13
EFCAB2-214ENST00000518607 ZC3H13Q5T200 1668 aaKnown RBP34.6■■■■□ 3.13
EFCAB2-214ENST00000518607 PTPRTO14522 1441 aa34.59■■■■□ 3.13
EFCAB2-214ENST00000518607 WASHC2CQ9Y4E1 1318 aa34.58■■■■□ 3.13
EFCAB2-214ENST00000518607 ABCC5O15440 1437 aa34.57■■■■□ 3.13
EFCAB2-214ENST00000518607 DAPK1P53355 1430 aa34.55■■■■□ 3.12
EFCAB2-214ENST00000518607 PLA2R1Q13018 1463 aa34.53■■■■□ 3.12
EFCAB2-214ENST00000518607 A2ML1A8K2U0 1454 aa34.52■■■■□ 3.12
EFCAB2-214ENST00000518607 MROH1Q8NDA8 1641 aa34.52■■■■□ 3.12
EFCAB2-214ENST00000518607 KIF15Q9NS87 1388 aa34.51■■■■□ 3.12
EFCAB2-214ENST00000518607 ABCC3O15438 1527 aa34.51■■■■□ 3.12
EFCAB2-214ENST00000518607 TNRQ92752 1358 aa34.5■■■■□ 3.11
EFCAB2-214ENST00000518607 ERBINQ96RT1 1412 aa34.49■■■■□ 3.11
EFCAB2-214ENST00000518607 CERKQ8TCT0 537 aa34.48■■■■□ 3.11
EFCAB2-214ENST00000518607 CEP152O94986 1710 aa34.44■■■■□ 3.1
EFCAB2-214ENST00000518607 FBXO31Q5XUX0 539 aaPredicted RBP34.44■■■■□ 3.1
EFCAB2-214ENST00000518607 PRDM15P57071 1507 aaPredicted RBP34.44■■■■□ 3.1
EFCAB2-214ENST00000518607 NLRP1Q9C000 1473 aa34.4■■■■□ 3.1
EFCAB2-214ENST00000518607 PKD2Q13563 968 aa34.4■■■■□ 3.1
EFCAB2-214ENST00000518607 RRP7BPQ9NSQ0 103 aa34.4■■■■□ 3.1
EFCAB2-214ENST00000518607 ANKRD30AQ9BXX3 1397 aa34.39■■■■□ 3.1
EFCAB2-214ENST00000518607 DEPDC5O75140 1603 aa34.38■■■■□ 3.09
EFCAB2-214ENST00000518607 SPATA31D1Q6ZQQ2 1576 aa34.38■■■■□ 3.09
EFCAB2-214ENST00000518607 NCKAP5LQ9HCH0 1330 aa34.37■■■■□ 3.09
EFCAB2-214ENST00000518607 POLR1AO95602 1720 aaPredicted RBP34.35■■■■□ 3.09
EFCAB2-214ENST00000518607 ADGRL2O95490 1459 aa34.33■■■■□ 3.09
EFCAB2-214ENST00000518607 ERVK-7P63135 1459 aa34.33■■■■□ 3.09
EFCAB2-214ENST00000518607 LTBP4Q8N2S1 1624 aa34.33■■■■□ 3.09
EFCAB2-214ENST00000518607 FAM50AQ14320 339 aaKnown RBP34.31■■■■□ 3.08
EFCAB2-214ENST00000518607 UGGT1Q9NYU2 1555 aa34.31■■■■□ 3.08
EFCAB2-214ENST00000518607 CHIC2Q9UKJ5 165 aa34.3■■■■□ 3.08
EFCAB2-214ENST00000518607 ARHGAP31Q2M1Z3 1444 aa34.26■■■■□ 3.07
EFCAB2-214ENST00000518607 KANK1Q14678 1352 aa34.25■■■■□ 3.07
EFCAB2-214ENST00000518607 CFAP65Q6ZU64 1925 aaKnown RBP34.25■■■■□ 3.07
EFCAB2-214ENST00000518607 NEURL4Q96JN8 1562 aa34.24■■■■□ 3.07
EFCAB2-214ENST00000518607 IQSEC2Q5JU85 1478 aa34.23■■■■□ 3.07
EFCAB2-214ENST00000518607 THEMISQ8N1K5 641 aaPredicted RBP34.22■■■■□ 3.07
EFCAB2-214ENST00000518607 VWDEQ8N2E2 1590 aa34.21■■■■□ 3.07
EFCAB2-214ENST00000518607 LMTK2Q8IWU2 1503 aa34.2■■■■□ 3.07
EFCAB2-214ENST00000518607 GRWD1Q9BQ67 446 aaKnown RBP eCLIP34.2■■■■□ 3.07
EFCAB2-214ENST00000518607 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP34.2■■■■□ 3.07
EFCAB2-214ENST00000518607 ZNF335Q9H4Z2 1342 aaPredicted RBP34.18■■■■□ 3.06
EFCAB2-214ENST00000518607 UBR1Q8IWV7 1749 aa34.16■■■■□ 3.06
EFCAB2-214ENST00000518607 ANKLE2Q86XL3 938 aa34.15■■■■□ 3.06
EFCAB2-214ENST00000518607 ANKRD50Q9ULJ7 1429 aa34.14■■■■□ 3.06
EFCAB2-214ENST00000518607 EFCAB6Q5THR3 1501 aa34.11■■■■□ 3.05
EFCAB2-214ENST00000518607 MED14O60244 1454 aa34.11■■■■□ 3.05
EFCAB2-214ENST00000518607 IQGAP1P46940 1657 aa34.09■■■■□ 3.05
EFCAB2-214ENST00000518607 NPHP4O75161 1426 aaPredicted RBP34.08■■■■□ 3.05
EFCAB2-214ENST00000518607 ROCK1Q13464 1354 aa34.06■■■■□ 3.04
EFCAB2-214ENST00000518607 PIK3C2BO00750 1634 aa34.04■■■■□ 3.04
EFCAB2-214ENST00000518607 UNC13BO14795 1591 aa34.02■■■■□ 3.04
EFCAB2-214ENST00000518607 CPS1P31327 1500 aa34.02■■■■□ 3.04
EFCAB2-214ENST00000518607 KDM5AP29375 1690 aaKnown RBP34.02■■■■□ 3.04
EFCAB2-214ENST00000518607 SLIT1O75093 1534 aa34■■■■□ 3.03
EFCAB2-214ENST00000518607 TET3O43151 1660 aa34■■■■□ 3.03
EFCAB2-214ENST00000518607 SYNMO15061 1565 aa34■■■■□ 3.03
EFCAB2-214ENST00000518607 PPARGC1BQ86YN6 1023 aaKnown RBP33.99■■■■□ 3.03
EFCAB2-214ENST00000518607 RPRD2Q5VT52 1461 aaKnown RBP33.99■■■■□ 3.03
EFCAB2-214ENST00000518607 SCAF11Q99590 1463 aaKnown RBP33.99■■■■□ 3.03
EFCAB2-214ENST00000518607 ARHGAP23Q9P227 1491 aa33.99■■■■□ 3.03
EFCAB2-214ENST00000518607 NOS1P29475 1434 aa33.97■■■■□ 3.03
EFCAB2-214ENST00000518607 GCC2Q8IWJ2 1684 aa33.96■■■■□ 3.03
EFCAB2-214ENST00000518607 STAG3Q9UJ98 1225 aa33.9■■■■□ 3.02
EFCAB2-214ENST00000518607 ADGRB3O60242 1522 aa33.89■■■■□ 3.02
EFCAB2-214ENST00000518607 IQGAP3Q86VI3 1631 aa33.89■■■■□ 3.02
EFCAB2-214ENST00000518607 TMEM2Q9UHN6 1383 aa33.88■■■■□ 3.01
EFCAB2-214ENST00000518607 ITGAEP38570 1179 aa33.88■■■■□ 3.01
EFCAB2-214ENST00000518607 RRBP1Q9P2E9 1410 aaKnown RBP33.87■■■■□ 3.01
EFCAB2-214ENST00000518607 IDI1Q13907 227 aa33.86■■■■□ 3.01
EFCAB2-214ENST00000518607 EID1Q9Y6B2 187 aa33.86■■■■□ 3.01
EFCAB2-214ENST00000518607 TXNDC2Q86VQ3 553 aa33.85■■■■□ 3.01
EFCAB2-214ENST00000518607 UBAP1LF5GYI3 381 aa33.84■■■■□ 3.01
EFCAB2-214ENST00000518607 LTKP29376 864 aa33.83■■■■□ 3.01
EFCAB2-214ENST00000518607 SLC52A1Q9NWF4 448 aa33.83■■■■□ 3.01
EFCAB2-214ENST00000518607 E9PCH4 1651 aa33.82■■■■□ 3
EFCAB2-214ENST00000518607 STRCP1A6NGW2 1772 aa33.82■■■■□ 3
EFCAB2-214ENST00000518607 NUP155O75694 1391 aa33.74■■■□□ 2.99
EFCAB2-214ENST00000518607 MYO5BQ9ULV0 1848 aa33.74■■■□□ 2.99
EFCAB2-214ENST00000518607 LRRC7Q96NW7 1537 aa33.72■■■□□ 2.99
EFCAB2-214ENST00000518607 TMEM131LA2VDJ0 1609 aa33.71■■■□□ 2.99
EFCAB2-214ENST00000518607 TOM1O60784 492 aa33.69■■■□□ 2.98
EFCAB2-214ENST00000518607 ZFYVE9O95405 1425 aa33.64■■■□□ 2.98
EFCAB2-214ENST00000518607 SCAF1Q9H7N4 1312 aaKnown RBP33.61■■■□□ 2.97
EFCAB2-214ENST00000518607 SPHKAPQ2M3C7 1700 aa33.61■■■□□ 2.97
EFCAB2-214ENST00000518607 NAIPQ13075 1403 aa33.61■■■□□ 2.97
EFCAB2-214ENST00000518607 RIMS2Q9UQ26 1411 aa33.61■■■□□ 2.97
EFCAB2-214ENST00000518607 ALKQ9UM73 1620 aa33.61■■■□□ 2.97
EFCAB2-214ENST00000518607 PIP4K2BP78356 416 aa33.58■■■□□ 2.97
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms