RNA–Protein interactions for RNA: ENST00000515791.1

SFXN1-212, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-212ENST00000515791 NCOA1Q15788 1441 aa27.74■■■□□ 2.03
SFXN1-212ENST00000515791 FBXO41Q8TF61 875 aa27.73■■■□□ 2.03
SFXN1-212ENST00000515791 RNF17Q9BXT8 1623 aaKnown RBP27.73■■■□□ 2.03
SFXN1-212ENST00000515791 FGD6Q6ZV73 1430 aa27.73■■■□□ 2.03
SFXN1-212ENST00000515791 CROCC2H7BZ55 1655 aa27.72■■■□□ 2.03
SFXN1-212ENST00000515791 PTPRTO14522 1441 aa27.7■■■□□ 2.03
SFXN1-212ENST00000515791 DMRT2Q9Y5R5 561 aa27.7■■■□□ 2.02
SFXN1-212ENST00000515791 CAMSAP1Q5T5Y3 1602 aa27.7■■■□□ 2.02
SFXN1-212ENST00000515791 EIF2AK4Q9P2K8 1649 aaKnown RBP27.7■■■□□ 2.02
SFXN1-212ENST00000515791 SHANK2Q9UPX8 1470 aa27.7■■■□□ 2.02
SFXN1-212ENST00000515791 PZPP20742 1482 aa27.69■■■□□ 2.02
SFXN1-212ENST00000515791 CEP170BQ9Y4F5 1589 aaPredicted RBP27.69■■■□□ 2.02
SFXN1-212ENST00000515791 MROH1Q8NDA8 1641 aa27.68■■■□□ 2.02
SFXN1-212ENST00000515791 DNMT1P26358 1616 aaKnown RBP27.67■■■□□ 2.02
SFXN1-212ENST00000515791 WASHC2CQ9Y4E1 1318 aa27.67■■■□□ 2.02
SFXN1-212ENST00000515791 FBXO31Q5XUX0 539 aaPredicted RBP27.66■■■□□ 2.02
SFXN1-212ENST00000515791 DAPK1P53355 1430 aa27.66■■■□□ 2.02
SFXN1-212ENST00000515791 DUOX2Q9NRD8 1548 aa27.65■■■□□ 2.02
SFXN1-212ENST00000515791 CERKQ8TCT0 537 aa27.63■■■□□ 2.01
SFXN1-212ENST00000515791 ABCC3O15438 1527 aa27.62■■■□□ 2.01
SFXN1-212ENST00000515791 PLA2R1Q13018 1463 aa27.62■■■□□ 2.01
SFXN1-212ENST00000515791 A2ML1A8K2U0 1454 aa27.61■■■□□ 2.01
SFXN1-212ENST00000515791 KIF15Q9NS87 1388 aa27.6■■■□□ 2.01
SFXN1-212ENST00000515791 ZC3H13Q5T200 1668 aaKnown RBP27.6■■■□□ 2.01
SFXN1-212ENST00000515791 TNRQ92752 1358 aa27.59■■■□□ 2.01
SFXN1-212ENST00000515791 NCKAP5LQ9HCH0 1330 aa27.57■■■□□ 2
SFXN1-212ENST00000515791 ERBINQ96RT1 1412 aa27.57■■■□□ 2
SFXN1-212ENST00000515791 RRP7BPQ9NSQ0 103 aa27.56■■■□□ 2
SFXN1-212ENST00000515791 LTBP4Q8N2S1 1624 aa27.55■■■□□ 2
SFXN1-212ENST00000515791 PRDM15P57071 1507 aaPredicted RBP27.54■■■□□ 2
SFXN1-212ENST00000515791 CEP152O94986 1710 aa27.53■■■□□ 2
SFXN1-212ENST00000515791 SPATA31D1Q6ZQQ2 1576 aa27.52■■■□□ 2
SFXN1-212ENST00000515791 PKD2Q13563 968 aa27.52■■■□□ 2
SFXN1-212ENST00000515791 DEPDC5O75140 1603 aa27.52■■■□□ 2
SFXN1-212ENST00000515791 ADGRL2O95490 1459 aa27.5■■□□□ 1.99
SFXN1-212ENST00000515791 NLRP1Q9C000 1473 aa27.5■■□□□ 1.99
SFXN1-212ENST00000515791 CHIC2Q9UKJ5 165 aa27.49■■□□□ 1.99
SFXN1-212ENST00000515791 ERVK-7P63135 1459 aa27.48■■□□□ 1.99
SFXN1-212ENST00000515791 ANKRD30AQ9BXX3 1397 aa27.48■■□□□ 1.99
SFXN1-212ENST00000515791 NEURL4Q96JN8 1562 aa27.45■■□□□ 1.99
SFXN1-212ENST00000515791 ARHGAP31Q2M1Z3 1444 aa27.45■■□□□ 1.98
SFXN1-212ENST00000515791 VWDEQ8N2E2 1590 aa27.43■■□□□ 1.98
SFXN1-212ENST00000515791 UGGT1Q9NYU2 1555 aa27.43■■□□□ 1.98
SFXN1-212ENST00000515791 POLR1AO95602 1720 aaPredicted RBP27.42■■□□□ 1.98
SFXN1-212ENST00000515791 FAM50AQ14320 339 aaKnown RBP27.41■■□□□ 1.98
SFXN1-212ENST00000515791 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.4■■□□□ 1.98
SFXN1-212ENST00000515791 LMTK2Q8IWU2 1503 aa27.4■■□□□ 1.98
SFXN1-212ENST00000515791 ZNF335Q9H4Z2 1342 aaPredicted RBP27.39■■□□□ 1.97
SFXN1-212ENST00000515791 CFAP65Q6ZU64 1925 aaKnown RBP27.38■■□□□ 1.97
SFXN1-212ENST00000515791 THEMISQ8N1K5 641 aaPredicted RBP27.38■■□□□ 1.97
SFXN1-212ENST00000515791 IQSEC2Q5JU85 1478 aa27.37■■□□□ 1.97
SFXN1-212ENST00000515791 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.36■■□□□ 1.977e-8■■□□□ 14
SFXN1-212ENST00000515791 MED14O60244 1454 aa27.34■■□□□ 1.97
SFXN1-212ENST00000515791 UBR1Q8IWV7 1749 aa27.33■■□□□ 1.97
SFXN1-212ENST00000515791 KANK1Q14678 1352 aa27.32■■□□□ 1.96
SFXN1-212ENST00000515791 ANKRD50Q9ULJ7 1429 aa27.32■■□□□ 1.96
SFXN1-212ENST00000515791 ANKLE2Q86XL3 938 aa27.31■■□□□ 1.96
SFXN1-212ENST00000515791 PPARGC1BQ86YN6 1023 aaKnown RBP27.29■■□□□ 1.96
SFXN1-212ENST00000515791 EFCAB6Q5THR3 1501 aa27.27■■□□□ 1.96
SFXN1-212ENST00000515791 NPHP4O75161 1426 aaPredicted RBP27.26■■□□□ 1.95
SFXN1-212ENST00000515791 ROCK1Q13464 1354 aa27.26■■□□□ 1.95
SFXN1-212ENST00000515791 ARHGAP23Q9P227 1491 aa27.25■■□□□ 1.95
SFXN1-212ENST00000515791 NOS1P29475 1434 aa27.24■■□□□ 1.95
SFXN1-212ENST00000515791 SYNMO15061 1565 aa27.24■■□□□ 1.95
SFXN1-212ENST00000515791 PIK3C2BO00750 1634 aa27.23■■□□□ 1.95
SFXN1-212ENST00000515791 SLIT1O75093 1534 aa27.23■■□□□ 1.95
SFXN1-212ENST00000515791 IQGAP1P46940 1657 aa27.23■■□□□ 1.95
SFXN1-212ENST00000515791 UNC13BO14795 1591 aa27.22■■□□□ 1.95
SFXN1-212ENST00000515791 KDM5AP29375 1690 aaKnown RBP27.19■■□□□ 1.94
SFXN1-212ENST00000515791 LTKP29376 864 aa27.18■■□□□ 1.94
SFXN1-212ENST00000515791 IDI1Q13907 227 aa27.18■■□□□ 1.94
SFXN1-212ENST00000515791 CPS1P31327 1500 aa27.17■■□□□ 1.94
SFXN1-212ENST00000515791 TET3O43151 1660 aa27.17■■□□□ 1.94
SFXN1-212ENST00000515791 RPRD2Q5VT52 1461 aaKnown RBP27.16■■□□□ 1.94
SFXN1-212ENST00000515791 SCAF11Q99590 1463 aaKnown RBP27.16■■□□□ 1.94
SFXN1-212ENST00000515791 STRCP1A6NGW2 1772 aa27.14■■□□□ 1.93
SFXN1-212ENST00000515791 RRBP1Q9P2E9 1410 aaKnown RBP27.14■■□□□ 1.93
SFXN1-212ENST00000515791 TMEM2Q9UHN6 1383 aa27.13■■□□□ 1.93
SFXN1-212ENST00000515791 GCC2Q8IWJ2 1684 aa27.12■■□□□ 1.93
SFXN1-212ENST00000515791 TXNDC2Q86VQ3 553 aa27.11■■□□□ 1.93
SFXN1-212ENST00000515791 IQGAP3Q86VI3 1631 aa27.1■■□□□ 1.93
SFXN1-212ENST00000515791 ITGAEP38570 1179 aa27.1■■□□□ 1.93
SFXN1-212ENST00000515791 ADGRB3O60242 1522 aa27.08■■□□□ 1.93
SFXN1-212ENST00000515791 SLC52A1Q9NWF4 448 aa27.08■■□□□ 1.93
SFXN1-212ENST00000515791 E9PCH4 1651 aa27.08■■□□□ 1.92
SFXN1-212ENST00000515791 UBAP1LF5GYI3 381 aa27.06■■□□□ 1.92
SFXN1-212ENST00000515791 ALKQ9UM73 1620 aa27.03■■□□□ 1.92
SFXN1-212ENST00000515791 EID1Q9Y6B2 187 aa27.03■■□□□ 1.92
SFXN1-212ENST00000515791 LRRC7Q96NW7 1537 aa27.02■■□□□ 1.92
SFXN1-212ENST00000515791 STAG3Q9UJ98 1225 aa27.02■■□□□ 1.92
SFXN1-212ENST00000515791 NUP155O75694 1391 aa27■■□□□ 1.91
SFXN1-212ENST00000515791 TMEM131LA2VDJ0 1609 aa27■■□□□ 1.91
SFXN1-212ENST00000515791 MYO5BQ9ULV0 1848 aa26.99■■□□□ 1.91
SFXN1-212ENST00000515791 ZFYVE9O95405 1425 aa26.99■■□□□ 1.91
SFXN1-212ENST00000515791 NAIPQ13075 1403 aa26.96■■□□□ 1.91
SFXN1-212ENST00000515791 XIRP1Q702N8 1843 aaKnown RBP26.93■■□□□ 1.9
SFXN1-212ENST00000515791 TOM1O60784 492 aa26.92■■□□□ 1.9
SFXN1-212ENST00000515791 RIMS2Q9UQ26 1411 aa26.89■■□□□ 1.89
SFXN1-212ENST00000515791 SLC26A8Q96RN1 970 aa26.88■■□□□ 1.89
SFXN1-212ENST00000515791 PLEKHG1Q9ULL1 1385 aa26.86■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms