RNA–Protein interactions for RNA: ENST00000515791.1

SFXN1-212, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-212ENST00000515791 NISCHQ9Y2I1 1504 aa44.08■■■■■ 4.65
SFXN1-212ENST00000515791 CCDC180Q9P1Z9 1646 aa39.37■■■■□ 3.89
SFXN1-212ENST00000515791 ABCC9O60706 1549 aa38.98■■■■□ 3.83
SFXN1-212ENST00000515791 RB1CC1Q8TDY2 1594 aa37.27■■■■□ 3.56
SFXN1-212ENST00000515791 NACADO15069 1562 aa37.12■■■■□ 3.53
SFXN1-212ENST00000515791 DCAF8L2P0C7V8 631 aa36.86■■■■□ 3.49
SFXN1-212ENST00000515791 MYO15BQ96JP2 1530 aa36.8■■■■□ 3.48
SFXN1-212ENST00000515791 ZCCHC6Q5VYS8 1495 aaKnown RBP36.62■■■■□ 3.45
SFXN1-212ENST00000515791 UNC13AQ9UPW8 1703 aa36.51■■■■□ 3.43
SFXN1-212ENST00000515791 DCAF1Q9Y4B6 1507 aa36.46■■■■□ 3.43
SFXN1-212ENST00000515791 DNAJC5BQ9UF47 199 aa36.35■■■■□ 3.41
SFXN1-212ENST00000515791 PABPN1Q86U42 306 aaKnown RBP eCLIP36.34■■■■□ 3.41
SFXN1-212ENST00000515791 BICRAQ9NZM4 1560 aa36.28■■■■□ 3.4
SFXN1-212ENST00000515791 SCRIBQ14160 1630 aa35.86■■■■□ 3.33
SFXN1-212ENST00000515791 SHROOM4Q9ULL8 1493 aa35.76■■■■□ 3.32
SFXN1-212ENST00000515791 EIF4G1Q04637 1599 aaKnown RBP35.3■■■■□ 3.24
SFXN1-212ENST00000515791 CC2D2AQ9P2K1 1620 aa35.27■■■■□ 3.24
SFXN1-212ENST00000515791 CECR2Q9BXF3 1484 aa35.08■■■■□ 3.21
SFXN1-212ENST00000515791 NCAPD3P42695 1498 aa34.31■■■■□ 3.08
SFXN1-212ENST00000515791 SMARCA4P51532 1647 aa34.29■■■■□ 3.08
SFXN1-212ENST00000515791 ATAD2BQ9ULI0 1458 aa34.25■■■■□ 3.07
SFXN1-212ENST00000515791 BAZ1AQ9NRL2 1556 aaPredicted RBP34.15■■■■□ 3.06
SFXN1-212ENST00000515791 SMARCA2P51531 1590 aa34.12■■■■□ 3.05
SFXN1-212ENST00000515791 HMGXB3Q12766 1538 aa34.07■■■■□ 3.04
SFXN1-212ENST00000515791 PEG3Q9GZU2 1588 aa34.01■■■■□ 3.03
SFXN1-212ENST00000515791 MROH2BQ7Z745 1585 aa33.98■■■■□ 3.03
SFXN1-212ENST00000515791 BAZ1BQ9UIG0 1483 aaKnown RBP33.87■■■■□ 3.01
SFXN1-212ENST00000515791 NESP48681 1621 aa33.64■■■□□ 2.98
SFXN1-212ENST00000515791 WIZO95785 1651 aa33.57■■■□□ 2.96
SFXN1-212ENST00000515791 ERCC6Q03468 1493 aa33.56■■■□□ 2.96
SFXN1-212ENST00000515791 CUX2O14529 1486 aa33.46■■■□□ 2.95
SFXN1-212ENST00000515791 LAMC3Q9Y6N6 1575 aa33.44■■■□□ 2.94
SFXN1-212ENST00000515791 RSF1Q96T23 1441 aaPredicted RBP33.41■■■□□ 2.94
SFXN1-212ENST00000515791 CADPSQ9ULU8 1353 aa33.25■■■□□ 2.91
SFXN1-212ENST00000515791 THOC2Q8NI27 1593 aaKnown RBP33.24■■■□□ 2.91
SFXN1-212ENST00000515791 KIF21AQ7Z4S6 1674 aa33.2■■■□□ 2.91
SFXN1-212ENST00000515791 PDS5BQ9NTI5 1447 aa33.19■■■□□ 2.9
SFXN1-212ENST00000515791 TOP2AP11388 1531 aaKnown RBP33.16■■■□□ 2.9
SFXN1-212ENST00000515791 DNAJC5Q9H3Z4 198 aa33.05■■■□□ 2.88
SFXN1-212ENST00000515791 CFTRP13569 1480 aa32.98■■■□□ 2.87
SFXN1-212ENST00000515791 MRC2Q9UBG0 1479 aa32.91■■■□□ 2.86
SFXN1-212ENST00000515791 WDR62O43379 1518 aa32.86■■■□□ 2.85
SFXN1-212ENST00000515791 FANCD2Q9BXW9 1451 aa32.86■■■□□ 2.85
SFXN1-212ENST00000515791 CEP164Q9UPV0 1460 aa32.83■■■□□ 2.85
SFXN1-212ENST00000515791 CCDC88BA6NC98 1476 aa32.8■■■□□ 2.84
SFXN1-212ENST00000515791 PRDM2Q13029 1718 aa32.64■■■□□ 2.82
SFXN1-212ENST00000515791 URB2Q14146 1524 aaKnown RBP32.61■■■□□ 2.81
SFXN1-212ENST00000515791 TOPBP1Q92547 1522 aa32.3■■■□□ 2.76
SFXN1-212ENST00000515791 ABCC8Q09428 1581 aa32.21■■■□□ 2.75
SFXN1-212ENST00000515791 DNMBPQ6XZF7 1577 aa32.19■■■□□ 2.74
SFXN1-212ENST00000515791 IFT140Q96RY7 1462 aa32.18■■■□□ 2.74
SFXN1-212ENST00000515791 ZNF608Q9ULD9 1512 aaPredicted RBP32.14■■■□□ 2.74
SFXN1-212ENST00000515791 SUPT5HO00267 1087 aaKnown RBP32.06■■■□□ 2.72
SFXN1-212ENST00000515791 TARBP1Q13395 1621 aaKnown RBP32.02■■■□□ 2.72
SFXN1-212ENST00000515791 POLA1P09884 1462 aaPredicted RBP32■■■□□ 2.71
SFXN1-212ENST00000515791 EIF4G3O43432 1585 aaKnown RBP31.95■■■□□ 2.71
SFXN1-212ENST00000515791 OSCARQ8IYS5 282 aa31.95■■■□□ 2.71
SFXN1-212ENST00000515791 CUX1P39880 1505 aa31.89■■■□□ 2.7
SFXN1-212ENST00000515791 AQRO60306 1485 aaKnown RBP eCLIP31.87■■■□□ 2.693e-6■■■■■ 39.3
SFXN1-212ENST00000515791 RAD54L2Q9Y4B4 1467 aa31.86■■■□□ 2.69
SFXN1-212ENST00000515791 FGD5Q6ZNL6 1462 aa31.83■■■□□ 2.69
SFXN1-212ENST00000515791 SOGA1O94964 1423 aa31.82■■■□□ 2.68
SFXN1-212ENST00000515791 TDRD9Q8NDG6 1382 aaKnown RBP31.71■■■□□ 2.67
SFXN1-212ENST00000515791 WDR97A6NE52 1622 aa31.68■■■□□ 2.66
SFXN1-212ENST00000515791 CHD1O14646 1710 aa31.64■■■□□ 2.66
SFXN1-212ENST00000515791 TRIM41Q8WV44 630 aa31.63■■■□□ 2.65
SFXN1-212ENST00000515791 RIMBP3CA6NJZ7 1639 aa31.56■■■□□ 2.64
SFXN1-212ENST00000515791 RIMBP3BA6NNM3 1639 aa31.56■■■□□ 2.64
SFXN1-212ENST00000515791 RIMBP3Q9UFD9 1639 aa31.56■■■□□ 2.64
SFXN1-212ENST00000515791 SNAPC4Q5SXM2 1469 aa31.54■■■□□ 2.64
SFXN1-212ENST00000515791 ABCA10Q8WWZ4 1543 aa31.51■■■□□ 2.63
SFXN1-212ENST00000515791 GRIN2BQ13224 1484 aa31.5■■■□□ 2.63
SFXN1-212ENST00000515791 ARHGEF11O15085 1522 aa31.49■■■□□ 2.63
SFXN1-212ENST00000515791 BIVM-ERCC5R4GMW8 1640 aa31.48■■■□□ 2.63
SFXN1-212ENST00000515791 MAGI1Q96QZ7 1491 aaPredicted RBP31.47■■■□□ 2.63
SFXN1-212ENST00000515791 TOP2BQ02880 1626 aa31.47■■■□□ 2.63
SFXN1-212ENST00000515791 FBLN2P98095 1184 aa31.46■■■□□ 2.63
SFXN1-212ENST00000515791 SYNJ1O43426 1573 aa31.45■■■□□ 2.63
SFXN1-212ENST00000515791 WRNQ14191 1432 aaPredicted RBP eCLIP31.44■■■□□ 2.62
SFXN1-212ENST00000515791 ABCA5Q8WWZ7 1642 aa31.44■■■□□ 2.62
SFXN1-212ENST00000515791 GAPVD1Q14C86 1478 aa31.44■■■□□ 2.62
SFXN1-212ENST00000515791 PBRM1Q86U86 1689 aa31.41■■■□□ 2.62
SFXN1-212ENST00000515791 SYNJ2O15056 1496 aa31.36■■■□□ 2.61
SFXN1-212ENST00000515791 CLASP1Q7Z460 1538 aa31.34■■■□□ 2.61
SFXN1-212ENST00000515791 CHMP7Q8WUX9 453 aaPredicted RBP31.33■■■□□ 2.61
SFXN1-212ENST00000515791 ARAP1Q96P48 1450 aa31.22■■■□□ 2.59
SFXN1-212ENST00000515791 CYB5RLQ6IPT4 315 aa31.17■■■□□ 2.58
SFXN1-212ENST00000515791 ADAMTS12P58397 1594 aa31.15■■■□□ 2.58
SFXN1-212ENST00000515791 GRIN2AQ12879 1464 aa31.11■■■□□ 2.57
SFXN1-212ENST00000515791 ERICH3Q5RHP9 1530 aa31.1■■■□□ 2.57
SFXN1-212ENST00000515791 FHAD1B1AJZ9 1412 aa31.06■■■□□ 2.56
SFXN1-212ENST00000515791 NUP160Q12769 1436 aa31.03■■■□□ 2.56
SFXN1-212ENST00000515791 CEP170Q5SW79 1584 aa31.01■■■□□ 2.56
SFXN1-212ENST00000515791 ERCC6L2Q5T890 1561 aa30.88■■■□□ 2.53
SFXN1-212ENST00000515791 SHROOM2Q13796 1616 aa30.87■■■□□ 2.53
SFXN1-212ENST00000515791 IGF1RP08069 1367 aa30.82■■■□□ 2.52
SFXN1-212ENST00000515791 KIF27Q86VH2 1401 aa30.8■■■□□ 2.52
SFXN1-212ENST00000515791 RUSC2Q8N2Y8 1516 aa30.72■■■□□ 2.51
SFXN1-212ENST00000515791 CUL7Q14999 1698 aa30.69■■■□□ 2.5
SFXN1-212ENST00000515791 JPH4Q96JJ6 628 aa30.66■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms