RNA–Protein interactions for RNA: ENST00000509468.1

KDM3B-206, Transcript of lysine demethylase 3B, humanhuman

TSL 5

Gene KDM3B, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-206ENST00000509468 FAM135AQ9P2D6 1515 aa19.8■□□□□ 0.76
KDM3B-206ENST00000509468 MYO3AQ8NEV4 1616 aa19.79■□□□□ 0.76
KDM3B-206ENST00000509468 NCKAP5LQ9HCH0 1330 aa19.78■□□□□ 0.76
KDM3B-206ENST00000509468 ZNF142P52746 1687 aaPredicted RBP19.78■□□□□ 0.76
KDM3B-206ENST00000509468 MAST1Q9Y2H9 1570 aa19.78■□□□□ 0.76
KDM3B-206ENST00000509468 CEP170BQ9Y4F5 1589 aaPredicted RBP19.77■□□□□ 0.76
KDM3B-206ENST00000509468 KDM5DQ9BY66 1539 aa19.76■□□□□ 0.75
KDM3B-206ENST00000509468 FBXO31Q5XUX0 539 aaPredicted RBP19.76■□□□□ 0.75
KDM3B-206ENST00000509468 PLA2R1Q13018 1463 aa19.75■□□□□ 0.75
KDM3B-206ENST00000509468 A2ML1A8K2U0 1454 aa19.73■□□□□ 0.75
KDM3B-206ENST00000509468 PZPP20742 1482 aa19.73■□□□□ 0.75
KDM3B-206ENST00000509468 TNRQ92752 1358 aa19.73■□□□□ 0.75
KDM3B-206ENST00000509468 DNMT1P26358 1616 aaKnown RBP19.71■□□□□ 0.75
KDM3B-206ENST00000509468 LTBP4Q8N2S1 1624 aa19.7■□□□□ 0.74
KDM3B-206ENST00000509468 EIF2AK4Q9P2K8 1649 aaKnown RBP19.7■□□□□ 0.74
KDM3B-206ENST00000509468 THEMISQ8N1K5 641 aaPredicted RBP19.7■□□□□ 0.74
KDM3B-206ENST00000509468 RNF17Q9BXT8 1623 aaKnown RBP19.69■□□□□ 0.74
KDM3B-206ENST00000509468 TCOF1Q13428 1488 aaKnown RBP19.69■□□□□ 0.74
KDM3B-206ENST00000509468 DUOX2Q9NRD8 1548 aa19.68■□□□□ 0.74
KDM3B-206ENST00000509468 PTPN23Q9H3S7 1636 aa19.68■□□□□ 0.74
KDM3B-206ENST00000509468 IQSEC2Q5JU85 1478 aa19.67■□□□□ 0.74
KDM3B-206ENST00000509468 ZC3H13Q5T200 1668 aaKnown RBP19.66■□□□□ 0.74
KDM3B-206ENST00000509468 ANKLE2Q86XL3 938 aa19.66■□□□□ 0.74
KDM3B-206ENST00000509468 RRP7BPQ9NSQ0 103 aa19.66■□□□□ 0.74
KDM3B-206ENST00000509468 ABCC5O15440 1437 aa19.66■□□□□ 0.74
KDM3B-206ENST00000509468 NLRP1Q9C000 1473 aa19.66■□□□□ 0.74
KDM3B-206ENST00000509468 FGD6Q6ZV73 1430 aa19.64■□□□□ 0.73
KDM3B-206ENST00000509468 SHANK2Q9UPX8 1470 aa19.64■□□□□ 0.73
KDM3B-206ENST00000509468 ABCC3O15438 1527 aa19.63■□□□□ 0.73
KDM3B-206ENST00000509468 KIF15Q9NS87 1388 aa19.63■□□□□ 0.73
KDM3B-206ENST00000509468 ZNF335Q9H4Z2 1342 aaPredicted RBP19.63■□□□□ 0.73
KDM3B-206ENST00000509468 CROCC2H7BZ55 1655 aa19.62■□□□□ 0.73
KDM3B-206ENST00000509468 DAPK1P53355 1430 aa19.61■□□□□ 0.73
KDM3B-206ENST00000509468 CFAP65Q6ZU64 1925 aaKnown RBP19.61■□□□□ 0.73
KDM3B-206ENST00000509468 POLR1AO95602 1720 aaPredicted RBP19.61■□□□□ 0.73
KDM3B-206ENST00000509468 ERBINQ96RT1 1412 aa19.6■□□□□ 0.73
KDM3B-206ENST00000509468 UGGT1Q9NYU2 1555 aa19.6■□□□□ 0.73
KDM3B-206ENST00000509468 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.59■□□□□ 0.73
KDM3B-206ENST00000509468 ANKRD30AQ9BXX3 1397 aa19.58■□□□□ 0.73
KDM3B-206ENST00000509468 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.58■□□□□ 0.72
KDM3B-206ENST00000509468 CHIC2Q9UKJ5 165 aa19.58■□□□□ 0.72
KDM3B-206ENST00000509468 MROH1Q8NDA8 1641 aa19.58■□□□□ 0.72
KDM3B-206ENST00000509468 SPATA31D1Q6ZQQ2 1576 aa19.57■□□□□ 0.72
KDM3B-206ENST00000509468 CEP152O94986 1710 aa19.57■□□□□ 0.72
KDM3B-206ENST00000509468 KANK1Q14678 1352 aa19.57■□□□□ 0.72
KDM3B-206ENST00000509468 ERVK-7P63135 1459 aa19.55■□□□□ 0.72
KDM3B-206ENST00000509468 ARHGAP31Q2M1Z3 1444 aa19.54■□□□□ 0.72
KDM3B-206ENST00000509468 UBAP1LF5GYI3 381 aa19.54■□□□□ 0.72
KDM3B-206ENST00000509468 FAM50AQ14320 339 aaKnown RBP19.54■□□□□ 0.72
KDM3B-206ENST00000509468 NEURL4Q96JN8 1562 aa19.53■□□□□ 0.72
KDM3B-206ENST00000509468 PRDM15P57071 1507 aaPredicted RBP19.53■□□□□ 0.72
KDM3B-206ENST00000509468 DEPDC5O75140 1603 aa19.53■□□□□ 0.72
KDM3B-206ENST00000509468 MED14O60244 1454 aa19.53■□□□□ 0.72
KDM3B-206ENST00000509468 NPHP4O75161 1426 aaPredicted RBP19.51■□□□□ 0.71
KDM3B-206ENST00000509468 CPS1P31327 1500 aa19.5■□□□□ 0.71
KDM3B-206ENST00000509468 UBR1Q8IWV7 1749 aa19.48■□□□□ 0.71
KDM3B-206ENST00000509468 IQGAP1P46940 1657 aa19.47■□□□□ 0.71
KDM3B-206ENST00000509468 TOM1O60784 492 aa19.46■□□□□ 0.71
KDM3B-206ENST00000509468 TXNDC2Q86VQ3 553 aa19.46■□□□□ 0.71
KDM3B-206ENST00000509468 STAG3Q9UJ98 1225 aa19.46■□□□□ 0.71
KDM3B-206ENST00000509468 EID1Q9Y6B2 187 aa19.46■□□□□ 0.71
KDM3B-206ENST00000509468 ADGRL2O95490 1459 aa19.46■□□□□ 0.71
KDM3B-206ENST00000509468 LMTK2Q8IWU2 1503 aa19.44■□□□□ 0.7
KDM3B-206ENST00000509468 VWDEQ8N2E2 1590 aa19.44■□□□□ 0.7
KDM3B-206ENST00000509468 DISP3Q9P2K9 1392 aa19.42■□□□□ 0.7
KDM3B-206ENST00000509468 ANKRD50Q9ULJ7 1429 aa19.42■□□□□ 0.7
KDM3B-206ENST00000509468 LTKP29376 864 aa19.41■□□□□ 0.7
KDM3B-206ENST00000509468 IDI1Q13907 227 aa19.41■□□□□ 0.7
KDM3B-206ENST00000509468 SCAF11Q99590 1463 aaKnown RBP19.41■□□□□ 0.7
KDM3B-206ENST00000509468 SLIT1O75093 1534 aa19.41■□□□□ 0.7
KDM3B-206ENST00000509468 SLC52A1Q9NWF4 448 aa19.4■□□□□ 0.7
KDM3B-206ENST00000509468 ARHGAP23Q9P227 1491 aa19.4■□□□□ 0.7
KDM3B-206ENST00000509468 KDM5AP29375 1690 aaKnown RBP19.4■□□□□ 0.7
KDM3B-206ENST00000509468 PIK3C2BO00750 1634 aa19.39■□□□□ 0.69
KDM3B-206ENST00000509468 PIP4K2BP78356 416 aa19.38■□□□□ 0.69
KDM3B-206ENST00000509468 SCAF1Q9H7N4 1312 aaKnown RBP19.38■□□□□ 0.69
KDM3B-206ENST00000509468 TMEM2Q9UHN6 1383 aa19.37■□□□□ 0.69
KDM3B-206ENST00000509468 EFCAB6Q5THR3 1501 aa19.35■□□□□ 0.69
KDM3B-206ENST00000509468 RPRD2Q5VT52 1461 aaKnown RBP19.35■□□□□ 0.69
KDM3B-206ENST00000509468 NOS1P29475 1434 aa19.34■□□□□ 0.69
KDM3B-206ENST00000509468 ROCK1Q13464 1354 aa19.34■□□□□ 0.69
KDM3B-206ENST00000509468 STRCP1A6NGW2 1772 aa19.34■□□□□ 0.69
KDM3B-206ENST00000509468 HDGFP51858 240 aaKnown RBP19.33■□□□□ 0.68
KDM3B-206ENST00000509468 LRRC7Q96NW7 1537 aa19.32■□□□□ 0.68
KDM3B-206ENST00000509468 SYNMO15061 1565 aa19.32■□□□□ 0.68
KDM3B-206ENST00000509468 TET3O43151 1660 aa19.3■□□□□ 0.68
KDM3B-206ENST00000509468 HSPA1LP34931 641 aa19.3■□□□□ 0.68
KDM3B-206ENST00000509468 ITGAEP38570 1179 aa19.3■□□□□ 0.68
KDM3B-206ENST00000509468 PPARGC1BQ86YN6 1023 aaKnown RBP19.3■□□□□ 0.68
KDM3B-206ENST00000509468 GCC2Q8IWJ2 1684 aa19.28■□□□□ 0.68
KDM3B-206ENST00000509468 UNC13BO14795 1591 aa19.27■□□□□ 0.68
KDM3B-206ENST00000509468 BCANQ96GW7 911 aa19.27■□□□□ 0.68
KDM3B-206ENST00000509468 ADGRB3O60242 1522 aa19.26■□□□□ 0.67
KDM3B-206ENST00000509468 ILDR2Q71H61 639 aa19.26■□□□□ 0.67
KDM3B-206ENST00000509468 KCNA6P17658 529 aa19.25■□□□□ 0.67
KDM3B-206ENST00000509468 SLC26A8Q96RN1 970 aa19.25■□□□□ 0.67
KDM3B-206ENST00000509468 NUP155O75694 1391 aa19.24■□□□□ 0.67
KDM3B-206ENST00000509468 PPP1R15AO75807 674 aaPredicted RBP19.22■□□□□ 0.67
KDM3B-206ENST00000509468 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.22■□□□□ 0.67
KDM3B-206ENST00000509468 IQGAP3Q86VI3 1631 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms