RNA–Protein interactions for RNA: ENST00000508434.1

C1QTNF3-204, Transcript of C1q and TNF related 3, humanhuman

TSL 2

Gene C1QTNF3, Length 677 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1QTNF3-204ENST00000508434 KDM5DQ9BY66 1539 aa26.37■■□□□ 1.81
C1QTNF3-204ENST00000508434 CAMSAP1Q5T5Y3 1602 aa26.35■■□□□ 1.81
C1QTNF3-204ENST00000508434 MYO3AQ8NEV4 1616 aa26.32■■□□□ 1.8
C1QTNF3-204ENST00000508434 PZPP20742 1482 aa26.32■■□□□ 1.8
C1QTNF3-204ENST00000508434 PKD2Q13563 968 aa26.32■■□□□ 1.8
C1QTNF3-204ENST00000508434 FBXO31Q5XUX0 539 aaPredicted RBP26.32■■□□□ 1.8
C1QTNF3-204ENST00000508434 ABCC5O15440 1437 aa26.31■■□□□ 1.8
C1QTNF3-204ENST00000508434 FGD6Q6ZV73 1430 aa26.31■■□□□ 1.8
C1QTNF3-204ENST00000508434 CEP170BQ9Y4F5 1589 aaPredicted RBP26.31■■□□□ 1.8
C1QTNF3-204ENST00000508434 PTPN23Q9H3S7 1636 aa26.31■■□□□ 1.8
C1QTNF3-204ENST00000508434 ZNF142P52746 1687 aaPredicted RBP26.31■■□□□ 1.8
C1QTNF3-204ENST00000508434 TNRQ92752 1358 aa26.3■■□□□ 1.8
C1QTNF3-204ENST00000508434 PLA2R1Q13018 1463 aa26.3■■□□□ 1.8
C1QTNF3-204ENST00000508434 NCKAP5LQ9HCH0 1330 aa26.29■■□□□ 1.8
C1QTNF3-204ENST00000508434 A2ML1A8K2U0 1454 aa26.29■■□□□ 1.8
C1QTNF3-204ENST00000508434 TCOF1Q13428 1488 aaKnown RBP26.29■■□□□ 1.8
C1QTNF3-204ENST00000508434 SHANK2Q9UPX8 1470 aa26.29■■□□□ 1.8
C1QTNF3-204ENST00000508434 DUOX2Q9NRD8 1548 aa26.28■■□□□ 1.8
C1QTNF3-204ENST00000508434 EIF2AK4Q9P2K8 1649 aaKnown RBP26.28■■□□□ 1.8
C1QTNF3-204ENST00000508434 RNF17Q9BXT8 1623 aaKnown RBP26.27■■□□□ 1.8
C1QTNF3-204ENST00000508434 DAPK1P53355 1430 aa26.25■■□□□ 1.79
C1QTNF3-204ENST00000508434 KIF15Q9NS87 1388 aa26.25■■□□□ 1.79
C1QTNF3-204ENST00000508434 RRP7BPQ9NSQ0 103 aa26.24■■□□□ 1.79
C1QTNF3-204ENST00000508434 ABCC3O15438 1527 aa26.22■■□□□ 1.79
C1QTNF3-204ENST00000508434 ERBINQ96RT1 1412 aa26.21■■□□□ 1.79
C1QTNF3-204ENST00000508434 DNMT1P26358 1616 aaKnown RBP26.21■■□□□ 1.79
C1QTNF3-204ENST00000508434 CROCC2H7BZ55 1655 aa26.19■■□□□ 1.78
C1QTNF3-204ENST00000508434 ZC3H13Q5T200 1668 aaKnown RBP26.19■■□□□ 1.78
C1QTNF3-204ENST00000508434 NLRP1Q9C000 1473 aa26.19■■□□□ 1.78
C1QTNF3-204ENST00000508434 THEMISQ8N1K5 641 aaPredicted RBP26.19■■□□□ 1.78
C1QTNF3-204ENST00000508434 ANKRD30AQ9BXX3 1397 aa26.19■■□□□ 1.78
C1QTNF3-204ENST00000508434 LTBP4Q8N2S1 1624 aa26.17■■□□□ 1.78
C1QTNF3-204ENST00000508434 MROH1Q8NDA8 1641 aa26.17■■□□□ 1.78
C1QTNF3-204ENST00000508434 CHIC2Q9UKJ5 165 aa26.16■■□□□ 1.78
C1QTNF3-204ENST00000508434 FAM50AQ14320 339 aaKnown RBP26.13■■□□□ 1.77
C1QTNF3-204ENST00000508434 ANKLE2Q86XL3 938 aa26.13■■□□□ 1.77
C1QTNF3-204ENST00000508434 SPATA31D1Q6ZQQ2 1576 aa26.12■■□□□ 1.77
C1QTNF3-204ENST00000508434 IQSEC2Q5JU85 1478 aa26.11■■□□□ 1.77
C1QTNF3-204ENST00000508434 UGGT1Q9NYU2 1555 aa26.11■■□□□ 1.77
C1QTNF3-204ENST00000508434 ZNF335Q9H4Z2 1342 aaPredicted RBP26.11■■□□□ 1.77
C1QTNF3-204ENST00000508434 ERVK-7P63135 1459 aa26.11■■□□□ 1.77
C1QTNF3-204ENST00000508434 PRDM15P57071 1507 aaPredicted RBP26.1■■□□□ 1.77
C1QTNF3-204ENST00000508434 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.1■■□□□ 1.77
C1QTNF3-204ENST00000508434 ARHGAP31Q2M1Z3 1444 aa26.1■■□□□ 1.77
C1QTNF3-204ENST00000508434 KANK1Q14678 1352 aa26.09■■□□□ 1.77
C1QTNF3-204ENST00000508434 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.09■■□□□ 1.77
C1QTNF3-204ENST00000508434 ADGRL2O95490 1459 aa26.07■■□□□ 1.76
C1QTNF3-204ENST00000508434 CEP152O94986 1710 aa26.05■■□□□ 1.76
C1QTNF3-204ENST00000508434 DEPDC5O75140 1603 aa26.04■■□□□ 1.76
C1QTNF3-204ENST00000508434 NEURL4Q96JN8 1562 aa26.02■■□□□ 1.76
C1QTNF3-204ENST00000508434 POLR1AO95602 1720 aaPredicted RBP26■■□□□ 1.75
C1QTNF3-204ENST00000508434 MED14O60244 1454 aa26■■□□□ 1.75
C1QTNF3-204ENST00000508434 LMTK2Q8IWU2 1503 aa25.99■■□□□ 1.75
C1QTNF3-204ENST00000508434 NPHP4O75161 1426 aaPredicted RBP25.98■■□□□ 1.75
C1QTNF3-204ENST00000508434 VWDEQ8N2E2 1590 aa25.98■■□□□ 1.75
C1QTNF3-204ENST00000508434 ANKRD50Q9ULJ7 1429 aa25.97■■□□□ 1.75
C1QTNF3-204ENST00000508434 CFAP65Q6ZU64 1925 aaKnown RBP25.94■■□□□ 1.74
C1QTNF3-204ENST00000508434 CPS1P31327 1500 aa25.91■■□□□ 1.74
C1QTNF3-204ENST00000508434 ROCK1Q13464 1354 aa25.91■■□□□ 1.74
C1QTNF3-204ENST00000508434 UBR1Q8IWV7 1749 aa25.91■■□□□ 1.74
C1QTNF3-204ENST00000508434 UBAP1LF5GYI3 381 aa25.9■■□□□ 1.74
C1QTNF3-204ENST00000508434 IDI1Q13907 227 aa25.89■■□□□ 1.74
C1QTNF3-204ENST00000508434 TXNDC2Q86VQ3 553 aa25.89■■□□□ 1.74
C1QTNF3-204ENST00000508434 ARHGAP23Q9P227 1491 aa25.88■■□□□ 1.73
C1QTNF3-204ENST00000508434 PPARGC1BQ86YN6 1023 aaKnown RBP25.88■■□□□ 1.73
C1QTNF3-204ENST00000508434 STAG3Q9UJ98 1225 aa25.88■■□□□ 1.73
C1QTNF3-204ENST00000508434 SLIT1O75093 1534 aa25.88■■□□□ 1.73
C1QTNF3-204ENST00000508434 LTKP29376 864 aa25.87■■□□□ 1.73
C1QTNF3-204ENST00000508434 EID1Q9Y6B2 187 aa25.87■■□□□ 1.73
C1QTNF3-204ENST00000508434 NOS1P29475 1434 aa25.87■■□□□ 1.73
C1QTNF3-204ENST00000508434 SCAF11Q99590 1463 aaKnown RBP25.86■■□□□ 1.73
C1QTNF3-204ENST00000508434 EFCAB6Q5THR3 1501 aa25.86■■□□□ 1.73
C1QTNF3-204ENST00000508434 IQGAP1P46940 1657 aa25.86■■□□□ 1.73
C1QTNF3-204ENST00000508434 SLC52A1Q9NWF4 448 aa25.85■■□□□ 1.73
C1QTNF3-204ENST00000508434 RPRD2Q5VT52 1461 aaKnown RBP25.84■■□□□ 1.73
C1QTNF3-204ENST00000508434 TMEM2Q9UHN6 1383 aa25.83■■□□□ 1.73
C1QTNF3-204ENST00000508434 PIK3C2BO00750 1634 aa25.82■■□□□ 1.72
C1QTNF3-204ENST00000508434 ITGAEP38570 1179 aa25.81■■□□□ 1.72
C1QTNF3-204ENST00000508434 TOM1O60784 492 aa25.8■■□□□ 1.72
C1QTNF3-204ENST00000508434 SYNMO15061 1565 aa25.8■■□□□ 1.72
C1QTNF3-204ENST00000508434 KDM5AP29375 1690 aaKnown RBP25.8■■□□□ 1.72
C1QTNF3-204ENST00000508434 UNC13BO14795 1591 aa25.77■■□□□ 1.72
C1QTNF3-204ENST00000508434 TET3O43151 1660 aa25.76■■□□□ 1.71
C1QTNF3-204ENST00000508434 ADGRB3O60242 1522 aa25.72■■□□□ 1.71
C1QTNF3-204ENST00000508434 NUP155O75694 1391 aa25.71■■□□□ 1.71
C1QTNF3-204ENST00000508434 LRRC7Q96NW7 1537 aa25.71■■□□□ 1.71
C1QTNF3-204ENST00000508434 RRBP1Q9P2E9 1410 aaKnown RBP25.71■■□□□ 1.71
C1QTNF3-204ENST00000508434 GCC2Q8IWJ2 1684 aa25.69■■□□□ 1.7
C1QTNF3-204ENST00000508434 HDGFP51858 240 aaKnown RBP25.69■■□□□ 1.7
C1QTNF3-204ENST00000508434 PIP4K2BP78356 416 aa25.68■■□□□ 1.7
C1QTNF3-204ENST00000508434 SCAF1Q9H7N4 1312 aaKnown RBP25.67■■□□□ 1.7
C1QTNF3-204ENST00000508434 STRCP1A6NGW2 1772 aa25.67■■□□□ 1.7
C1QTNF3-204ENST00000508434 IQGAP3Q86VI3 1631 aa25.66■■□□□ 1.7
C1QTNF3-204ENST00000508434 DISP3Q9P2K9 1392 aa25.65■■□□□ 1.7
C1QTNF3-204ENST00000508434 KCNA6P17658 529 aa25.63■■□□□ 1.69
C1QTNF3-204ENST00000508434 SLC26A8Q96RN1 970 aa25.63■■□□□ 1.69
C1QTNF3-204ENST00000508434 E9PCH4 1651 aa25.62■■□□□ 1.69
C1QTNF3-204ENST00000508434 ZFYVE9O95405 1425 aa25.62■■□□□ 1.69
C1QTNF3-204ENST00000508434 HSPA1LP34931 641 aa25.61■■□□□ 1.69
C1QTNF3-204ENST00000508434 CHGAP10645 457 aaKnown RBP25.6■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms