RNA–Protein interactions for RNA: ENST00000505884.5

CCND3-209, Transcript of cyclin D3, humanhuman

TSL 4

Gene CCND3, Length 592 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND3-209ENST00000505884 CERKQ8TCT0 537 aa28.43■■■□□ 2.14
CCND3-209ENST00000505884 KDM5DQ9BY66 1539 aa28.43■■■□□ 2.14
CCND3-209ENST00000505884 NCKAP5LQ9HCH0 1330 aa28.42■■■□□ 2.14
CCND3-209ENST00000505884 NCOA1Q15788 1441 aa28.41■■■□□ 2.14
CCND3-209ENST00000505884 CEP170BQ9Y4F5 1589 aaPredicted RBP28.41■■■□□ 2.14
CCND3-209ENST00000505884 ABCC5O15440 1437 aa28.39■■■□□ 2.14
CCND3-209ENST00000505884 FGD6Q6ZV73 1430 aa28.39■■■□□ 2.14
CCND3-209ENST00000505884 CROCC2H7BZ55 1655 aa28.38■■■□□ 2.13
CCND3-209ENST00000505884 ZNF142P52746 1687 aaPredicted RBP28.38■■■□□ 2.13
CCND3-209ENST00000505884 RRP7BPQ9NSQ0 103 aa28.38■■■□□ 2.13
CCND3-209ENST00000505884 CHIC2Q9UKJ5 165 aa28.36■■■□□ 2.13
CCND3-209ENST00000505884 PTPRTO14522 1441 aa28.35■■■□□ 2.13
CCND3-209ENST00000505884 RNF17Q9BXT8 1623 aaKnown RBP28.34■■■□□ 2.13
CCND3-209ENST00000505884 DAPK1P53355 1430 aa28.34■■■□□ 2.13
CCND3-209ENST00000505884 PZPP20742 1482 aa28.34■■■□□ 2.13
CCND3-209ENST00000505884 TNRQ92752 1358 aa28.33■■■□□ 2.13
CCND3-209ENST00000505884 KIF15Q9NS87 1388 aa28.32■■■□□ 2.12
CCND3-209ENST00000505884 DUOX2Q9NRD8 1548 aa28.32■■■□□ 2.12
CCND3-209ENST00000505884 DNMT1P26358 1616 aaKnown RBP28.32■■■□□ 2.12
CCND3-209ENST00000505884 EIF2AK4Q9P2K8 1649 aaKnown RBP28.32■■■□□ 2.12
CCND3-209ENST00000505884 TCOF1Q13428 1488 aaKnown RBP28.31■■■□□ 2.12
CCND3-209ENST00000505884 CEP152O94986 1710 aa28.31■■■□□ 2.12
CCND3-209ENST00000505884 CFAP65Q6ZU64 1925 aaKnown RBP28.3■■■□□ 2.12
CCND3-209ENST00000505884 FAM50AQ14320 339 aaKnown RBP28.3■■■□□ 2.12
CCND3-209ENST00000505884 MROH1Q8NDA8 1641 aa28.29■■■□□ 2.12
CCND3-209ENST00000505884 ABCC3O15438 1527 aa28.29■■■□□ 2.12
CCND3-209ENST00000505884 A2ML1A8K2U0 1454 aa28.29■■■□□ 2.12
CCND3-209ENST00000505884 FAM135AQ9P2D6 1515 aa28.28■■■□□ 2.12
CCND3-209ENST00000505884 SHANK2Q9UPX8 1470 aa28.28■■■□□ 2.12
CCND3-209ENST00000505884 PPARGC1BQ86YN6 1023 aaKnown RBP28.28■■■□□ 2.12
CCND3-209ENST00000505884 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.28■■■□□ 2.12
CCND3-209ENST00000505884 ZC3H13Q5T200 1668 aaKnown RBP28.24■■■□□ 2.11
CCND3-209ENST00000505884 PLA2R1Q13018 1463 aa28.23■■■□□ 2.11
CCND3-209ENST00000505884 PKD2Q13563 968 aa28.22■■■□□ 2.11
CCND3-209ENST00000505884 LTBP4Q8N2S1 1624 aa28.2■■■□□ 2.1
CCND3-209ENST00000505884 ZNF335Q9H4Z2 1342 aaPredicted RBP28.19■■■□□ 2.1
CCND3-209ENST00000505884 ERBINQ96RT1 1412 aa28.19■■■□□ 2.1
CCND3-209ENST00000505884 ANKRD30AQ9BXX3 1397 aa28.18■■■□□ 2.1
CCND3-209ENST00000505884 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.18■■■□□ 2.13e-7■□□□□ 10.7
CCND3-209ENST00000505884 POLR1AO95602 1720 aaPredicted RBP28.16■■■□□ 2.1
CCND3-209ENST00000505884 UGGT1Q9NYU2 1555 aa28.16■■■□□ 2.1
CCND3-209ENST00000505884 ERVK-7P63135 1459 aa28.15■■■□□ 2.1
CCND3-209ENST00000505884 PRDM15P57071 1507 aaPredicted RBP28.14■■■□□ 2.1
CCND3-209ENST00000505884 SPATA31D1Q6ZQQ2 1576 aa28.14■■■□□ 2.1
CCND3-209ENST00000505884 NLRP1Q9C000 1473 aa28.14■■■□□ 2.09
CCND3-209ENST00000505884 THEMISQ8N1K5 641 aaPredicted RBP28.12■■■□□ 2.09
CCND3-209ENST00000505884 DEPDC5O75140 1603 aa28.1■■■□□ 2.09
CCND3-209ENST00000505884 NEURL4Q96JN8 1562 aa28.1■■■□□ 2.09
CCND3-209ENST00000505884 ANKLE2Q86XL3 938 aa28.09■■■□□ 2.09
CCND3-209ENST00000505884 KANK1Q14678 1352 aa28.09■■■□□ 2.09
CCND3-209ENST00000505884 ITGAEP38570 1179 aa28.06■■■□□ 2.08
CCND3-209ENST00000505884 ADGRL2O95490 1459 aa28.05■■■□□ 2.08
CCND3-209ENST00000505884 UBR1Q8IWV7 1749 aa28.02■■■□□ 2.08
CCND3-209ENST00000505884 ARHGAP31Q2M1Z3 1444 aa28.01■■■□□ 2.07
CCND3-209ENST00000505884 ANKRD50Q9ULJ7 1429 aa28■■■□□ 2.07
CCND3-209ENST00000505884 NPHP4O75161 1426 aaPredicted RBP27.99■■■□□ 2.07
CCND3-209ENST00000505884 VWDEQ8N2E2 1590 aa27.98■■■□□ 2.07
CCND3-209ENST00000505884 PIK3C2BO00750 1634 aa27.96■■■□□ 2.07
CCND3-209ENST00000505884 IQGAP1P46940 1657 aa27.96■■■□□ 2.07
CCND3-209ENST00000505884 LMTK2Q8IWU2 1503 aa27.94■■■□□ 2.06
CCND3-209ENST00000505884 UBAP1LF5GYI3 381 aa27.94■■■□□ 2.06
CCND3-209ENST00000505884 STAG3Q9UJ98 1225 aa27.94■■■□□ 2.06
CCND3-209ENST00000505884 IQSEC2Q5JU85 1478 aa27.94■■■□□ 2.06
CCND3-209ENST00000505884 MED14O60244 1454 aa27.92■■■□□ 2.06
CCND3-209ENST00000505884 EFCAB6Q5THR3 1501 aa27.92■■■□□ 2.06
CCND3-209ENST00000505884 LTKP29376 864 aa27.91■■■□□ 2.06
CCND3-209ENST00000505884 SYNMO15061 1565 aa27.9■■■□□ 2.06
CCND3-209ENST00000505884 TXNDC2Q86VQ3 553 aa27.9■■■□□ 2.06
CCND3-209ENST00000505884 IDI1Q13907 227 aa27.89■■■□□ 2.06
CCND3-209ENST00000505884 SCAF11Q99590 1463 aaKnown RBP27.86■■■□□ 2.05
CCND3-209ENST00000505884 SENP3Q9H4L4 574 aaPredicted RBP27.85■■■□□ 2.05
CCND3-209ENST00000505884 STRCP1A6NGW2 1772 aa27.85■■■□□ 2.05
CCND3-209ENST00000505884 CPS1P31327 1500 aa27.84■■■□□ 2.05
CCND3-209ENST00000505884 SCAF1Q9H7N4 1312 aaKnown RBP27.84■■■□□ 2.05
CCND3-209ENST00000505884 ARHGAP23Q9P227 1491 aa27.83■■■□□ 2.05
CCND3-209ENST00000505884 SLIT1O75093 1534 aa27.83■■■□□ 2.05
CCND3-209ENST00000505884 UNC13BO14795 1591 aa27.83■■■□□ 2.05
CCND3-209ENST00000505884 EID1Q9Y6B2 187 aa27.83■■■□□ 2.05
CCND3-209ENST00000505884 ROCK1Q13464 1354 aa27.83■■■□□ 2.05
CCND3-209ENST00000505884 NOS1P29475 1434 aa27.83■■■□□ 2.05
CCND3-209ENST00000505884 TET3O43151 1660 aa27.82■■■□□ 2.04
CCND3-209ENST00000505884 PIP4K2BP78356 416 aa27.81■■■□□ 2.04
CCND3-209ENST00000505884 TMEM2Q9UHN6 1383 aa27.81■■■□□ 2.04
CCND3-209ENST00000505884 GCC2Q8IWJ2 1684 aa27.79■■■□□ 2.04
CCND3-209ENST00000505884 MYO5BQ9ULV0 1848 aa27.77■■■□□ 2.04
CCND3-209ENST00000505884 E9PCH4 1651 aa27.76■■■□□ 2.03
CCND3-209ENST00000505884 ADGRB3O60242 1522 aa27.76■■■□□ 2.03
CCND3-209ENST00000505884 NUP155O75694 1391 aa27.74■■■□□ 2.03
CCND3-209ENST00000505884 CHGAP10645 457 aaKnown RBP27.74■■■□□ 2.03
CCND3-209ENST00000505884 SLC52A1Q9NWF4 448 aa27.74■■■□□ 2.03
CCND3-209ENST00000505884 RPRD2Q5VT52 1461 aaKnown RBP27.74■■■□□ 2.03
CCND3-209ENST00000505884 KDM5AP29375 1690 aaKnown RBP27.74■■■□□ 2.03
CCND3-209ENST00000505884 IQGAP3Q86VI3 1631 aa27.73■■■□□ 2.03
CCND3-209ENST00000505884 BCANQ96GW7 911 aa27.72■■■□□ 2.03
CCND3-209ENST00000505884 SLC26A8Q96RN1 970 aa27.71■■■□□ 2.03
CCND3-209ENST00000505884 LRRC7Q96NW7 1537 aa27.71■■■□□ 2.03
CCND3-209ENST00000505884 TOM1O60784 492 aa27.7■■■□□ 2.02
CCND3-209ENST00000505884 RRBP1Q9P2E9 1410 aaKnown RBP27.69■■■□□ 2.02
CCND3-209ENST00000505884 DISP3Q9P2K9 1392 aa27.69■■■□□ 2.02
CCND3-209ENST00000505884 NUTM2DQ5VT03 806 aaPredicted RBP27.66■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms