RNA–Protein interactions for RNA: ENST00000505884.5

CCND3-209, Transcript of cyclin D3, humanhuman

TSL 4

Gene CCND3, Length 592 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND3-209ENST00000505884 NISCHQ9Y2I1 1504 aa45.03■■■■■ 4.8
CCND3-209ENST00000505884 CCDC180Q9P1Z9 1646 aa40.2■■■■■ 4.03
CCND3-209ENST00000505884 ABCC9O60706 1549 aa40.08■■■■■ 4.01
CCND3-209ENST00000505884 RB1CC1Q8TDY2 1594 aa38.15■■■■□ 3.7
CCND3-209ENST00000505884 DCAF8L2P0C7V8 631 aa38.13■■■■□ 3.69
CCND3-209ENST00000505884 NACADO15069 1562 aa37.93■■■■□ 3.66
CCND3-209ENST00000505884 PABPN1Q86U42 306 aaKnown RBP eCLIP37.43■■■■□ 3.58
CCND3-209ENST00000505884 UNC13AQ9UPW8 1703 aa37.41■■■■□ 3.58
CCND3-209ENST00000505884 MYO15BQ96JP2 1530 aa37.39■■■■□ 3.58
CCND3-209ENST00000505884 ZCCHC6Q5VYS8 1495 aaKnown RBP37.37■■■■□ 3.57
CCND3-209ENST00000505884 DNAJC5BQ9UF47 199 aa37.31■■■■□ 3.56
CCND3-209ENST00000505884 DCAF1Q9Y4B6 1507 aa37.08■■■■□ 3.53
CCND3-209ENST00000505884 BICRAQ9NZM4 1560 aa37.07■■■■□ 3.52
CCND3-209ENST00000505884 SCRIBQ14160 1630 aa36.85■■■■□ 3.49
CCND3-209ENST00000505884 SHROOM4Q9ULL8 1493 aa36.38■■■■□ 3.41
CCND3-209ENST00000505884 CC2D2AQ9P2K1 1620 aa36.16■■■■□ 3.38
CCND3-209ENST00000505884 EIF4G1Q04637 1599 aaKnown RBP36.13■■■■□ 3.37
CCND3-209ENST00000505884 CECR2Q9BXF3 1484 aa35.99■■■■□ 3.35
CCND3-209ENST00000505884 SMARCA4P51532 1647 aa35.09■■■■□ 3.21
CCND3-209ENST00000505884 ATAD2BQ9ULI0 1458 aa35.01■■■■□ 3.19
CCND3-209ENST00000505884 NCAPD3P42695 1498 aa35■■■■□ 3.19
CCND3-209ENST00000505884 BAZ1AQ9NRL2 1556 aaPredicted RBP34.91■■■■□ 3.18
CCND3-209ENST00000505884 SMARCA2P51531 1590 aa34.89■■■■□ 3.18
CCND3-209ENST00000505884 MROH2BQ7Z745 1585 aa34.78■■■■□ 3.16
CCND3-209ENST00000505884 HMGXB3Q12766 1538 aa34.77■■■■□ 3.16
CCND3-209ENST00000505884 BAZ1BQ9UIG0 1483 aaKnown RBP34.72■■■■□ 3.15
CCND3-209ENST00000505884 PEG3Q9GZU2 1588 aa34.62■■■■□ 3.13
CCND3-209ENST00000505884 ERCC6Q03468 1493 aa34.54■■■■□ 3.12
CCND3-209ENST00000505884 NESP48681 1621 aa34.53■■■■□ 3.12
CCND3-209ENST00000505884 WIZO95785 1651 aa34.43■■■■□ 3.1
CCND3-209ENST00000505884 CUX2O14529 1486 aa34.22■■■■□ 3.07
CCND3-209ENST00000505884 LAMC3Q9Y6N6 1575 aa34.19■■■■□ 3.06
CCND3-209ENST00000505884 RSF1Q96T23 1441 aaPredicted RBP34.13■■■■□ 3.05
CCND3-209ENST00000505884 KIF21AQ7Z4S6 1674 aa34.09■■■■□ 3.05
CCND3-209ENST00000505884 THOC2Q8NI27 1593 aaKnown RBP34.02■■■■□ 3.04
CCND3-209ENST00000505884 CADPSQ9ULU8 1353 aa34■■■■□ 3.03
CCND3-209ENST00000505884 PDS5BQ9NTI5 1447 aa33.98■■■■□ 3.03
CCND3-209ENST00000505884 TOP2AP11388 1531 aaKnown RBP33.9■■■■□ 3.02
CCND3-209ENST00000505884 DNAJC5Q9H3Z4 198 aa33.9■■■■□ 3.02
CCND3-209ENST00000505884 MRC2Q9UBG0 1479 aa33.7■■■□□ 2.99
CCND3-209ENST00000505884 CFTRP13569 1480 aa33.67■■■□□ 2.98
CCND3-209ENST00000505884 FANCD2Q9BXW9 1451 aa33.66■■■□□ 2.98
CCND3-209ENST00000505884 CEP164Q9UPV0 1460 aa33.65■■■□□ 2.98
CCND3-209ENST00000505884 WDR62O43379 1518 aa33.59■■■□□ 2.97
CCND3-209ENST00000505884 CCDC88BA6NC98 1476 aa33.56■■■□□ 2.96
CCND3-209ENST00000505884 PRDM2Q13029 1718 aa33.42■■■□□ 2.94
CCND3-209ENST00000505884 URB2Q14146 1524 aaKnown RBP33.38■■■□□ 2.93
CCND3-209ENST00000505884 SUPT5HO00267 1087 aaKnown RBP33.08■■■□□ 2.89
CCND3-209ENST00000505884 TOPBP1Q92547 1522 aa33.06■■■□□ 2.88
CCND3-209ENST00000505884 ZNF608Q9ULD9 1512 aaPredicted RBP32.96■■■□□ 2.87
CCND3-209ENST00000505884 DNMBPQ6XZF7 1577 aa32.95■■■□□ 2.86
CCND3-209ENST00000505884 IFT140Q96RY7 1462 aa32.93■■■□□ 2.86
CCND3-209ENST00000505884 ABCC8Q09428 1581 aa32.9■■■□□ 2.86
CCND3-209ENST00000505884 OSCARQ8IYS5 282 aa32.81■■■□□ 2.84
CCND3-209ENST00000505884 EIF4G3O43432 1585 aaKnown RBP32.76■■■□□ 2.84
CCND3-209ENST00000505884 TRIM41Q8WV44 630 aa32.76■■■□□ 2.83
CCND3-209ENST00000505884 POLA1P09884 1462 aaPredicted RBP32.74■■■□□ 2.83
CCND3-209ENST00000505884 TARBP1Q13395 1621 aaKnown RBP32.73■■■□□ 2.83
CCND3-209ENST00000505884 AQRO60306 1485 aaKnown RBP eCLIP32.71■■■□□ 2.837e-7■■■■■ 36
CCND3-209ENST00000505884 RAD54L2Q9Y4B4 1467 aa32.7■■■□□ 2.83
CCND3-209ENST00000505884 CUX1P39880 1505 aa32.65■■■□□ 2.82
CCND3-209ENST00000505884 FGD5Q6ZNL6 1462 aa32.61■■■□□ 2.81
CCND3-209ENST00000505884 SOGA1O94964 1423 aa32.61■■■□□ 2.81
CCND3-209ENST00000505884 TDRD9Q8NDG6 1382 aaKnown RBP32.57■■■□□ 2.8
CCND3-209ENST00000505884 FBLN2P98095 1184 aa32.52■■■□□ 2.8
CCND3-209ENST00000505884 CHD1O14646 1710 aa32.51■■■□□ 2.79
CCND3-209ENST00000505884 RIMBP3CA6NJZ7 1639 aa32.39■■■□□ 2.78
CCND3-209ENST00000505884 RIMBP3BA6NNM3 1639 aa32.39■■■□□ 2.78
CCND3-209ENST00000505884 RIMBP3Q9UFD9 1639 aa32.39■■■□□ 2.78
CCND3-209ENST00000505884 SNAPC4Q5SXM2 1469 aa32.35■■■□□ 2.77
CCND3-209ENST00000505884 WDR97A6NE52 1622 aa32.34■■■□□ 2.77
CCND3-209ENST00000505884 ARHGEF11O15085 1522 aa32.29■■■□□ 2.76
CCND3-209ENST00000505884 GRIN2BQ13224 1484 aa32.25■■■□□ 2.75
CCND3-209ENST00000505884 PBRM1Q86U86 1689 aa32.24■■■□□ 2.75
CCND3-209ENST00000505884 CHMP7Q8WUX9 453 aaPredicted RBP32.23■■■□□ 2.75
CCND3-209ENST00000505884 GAPVD1Q14C86 1478 aa32.22■■■□□ 2.75
CCND3-209ENST00000505884 SYNJ1O43426 1573 aa32.21■■■□□ 2.75
CCND3-209ENST00000505884 WRNQ14191 1432 aaPredicted RBP eCLIP32.19■■■□□ 2.749e-6■■■■■ 50.1
CCND3-209ENST00000505884 ABCA10Q8WWZ4 1543 aa32.19■■■□□ 2.74
CCND3-209ENST00000505884 MAGI1Q96QZ7 1491 aaPredicted RBP32.18■■■□□ 2.74
CCND3-209ENST00000505884 BIVM-ERCC5R4GMW8 1640 aa32.17■■■□□ 2.74
CCND3-209ENST00000505884 TOP2BQ02880 1626 aa32.16■■■□□ 2.74
CCND3-209ENST00000505884 ABCA5Q8WWZ7 1642 aa32.15■■■□□ 2.74
CCND3-209ENST00000505884 CYB5RLQ6IPT4 315 aa32.13■■■□□ 2.73
CCND3-209ENST00000505884 SYNJ2O15056 1496 aa32.1■■■□□ 2.73
CCND3-209ENST00000505884 CLASP1Q7Z460 1538 aa32.03■■■□□ 2.72
CCND3-209ENST00000505884 ARAP1Q96P48 1450 aa31.99■■■□□ 2.71
CCND3-209ENST00000505884 ADAMTS12P58397 1594 aa31.89■■■□□ 2.7
CCND3-209ENST00000505884 GRIN2AQ12879 1464 aa31.85■■■□□ 2.69
CCND3-209ENST00000505884 FHAD1B1AJZ9 1412 aa31.78■■■□□ 2.68
CCND3-209ENST00000505884 ERICH3Q5RHP9 1530 aa31.78■■■□□ 2.68
CCND3-209ENST00000505884 CEP170Q5SW79 1584 aa31.77■■■□□ 2.68
CCND3-209ENST00000505884 ERCC6L2Q5T890 1561 aa31.69■■■□□ 2.66
CCND3-209ENST00000505884 TRHP20396 242 aaPredicted RBP31.69■■■□□ 2.66
CCND3-209ENST00000505884 NUP160Q12769 1436 aa31.68■■■□□ 2.66
CCND3-209ENST00000505884 KIF27Q86VH2 1401 aa31.55■■■□□ 2.64
CCND3-209ENST00000505884 SHROOM2Q13796 1616 aa31.53■■■□□ 2.64
CCND3-209ENST00000505884 IGF1RP08069 1367 aa31.51■■■□□ 2.63
CCND3-209ENST00000505884 PRG4Q92954 1404 aaPredicted RBP31.45■■■□□ 2.63
CCND3-209ENST00000505884 JPH4Q96JJ6 628 aa31.44■■■□□ 2.62
Retrieved 100 of 20,778 RNA–protein pairs in 92.5 ms