RNA–Protein interactions for RNA: ENST00000505486.1

CASP6-205, Transcript of caspase 6, humanhuman

TSL 4 BASIC

Gene CASP6, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP6-205ENST00000505486 ARHGEF5Q12774 1597 aa31.74■■■□□ 2.67
CASP6-205ENST00000505486 CCDC141Q6ZP82 1450 aa31.74■■■□□ 2.67
CASP6-205ENST00000505486 ZNF142P52746 1687 aaPredicted RBP31.72■■■□□ 2.67
CASP6-205ENST00000505486 SPATA31D1Q6ZQQ2 1576 aa31.72■■■□□ 2.67
CASP6-205ENST00000505486 CEP170BQ9Y4F5 1589 aaPredicted RBP31.72■■■□□ 2.67
CASP6-205ENST00000505486 PLA2R1Q13018 1463 aa31.71■■■□□ 2.67
CASP6-205ENST00000505486 SOCS7O14512 581 aa31.68■■■□□ 2.66
CASP6-205ENST00000505486 PKD2Q13563 968 aa31.68■■■□□ 2.66
CASP6-205ENST00000505486 ADGBQ8N7X0 1667 aa31.66■■■□□ 2.66
CASP6-205ENST00000505486 TSPY4P0CV99 314 aa31.65■■■□□ 2.66
CASP6-205ENST00000505486 TSPY10P0CW01 314 aa31.65■■■□□ 2.66
CASP6-205ENST00000505486 FAM50AQ14320 339 aaKnown RBP31.65■■■□□ 2.66
CASP6-205ENST00000505486 PPP6R1Q9UPN7 881 aa31.65■■■□□ 2.66
CASP6-205ENST00000505486 RTEL1-TNFRSF6BF6WH68 1400 aa31.64■■■□□ 2.66
CASP6-205ENST00000505486 UBAP1LF5GYI3 381 aa31.62■■■□□ 2.65
CASP6-205ENST00000505486 DHX29Q7Z478 1369 aaKnown RBP31.6■■■□□ 2.65
CASP6-205ENST00000505486 A2ML1A8K2U0 1454 aa31.59■■■□□ 2.65
CASP6-205ENST00000505486 DNMT1P26358 1616 aaKnown RBP31.58■■■□□ 2.65
CASP6-205ENST00000505486 ABCC5O15440 1437 aa31.58■■■□□ 2.65
CASP6-205ENST00000505486 DAPK1P53355 1430 aa31.58■■■□□ 2.65
CASP6-205ENST00000505486 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.57■■■□□ 2.64
CASP6-205ENST00000505486 MAST1Q9Y2H9 1570 aa31.56■■■□□ 2.64
CASP6-205ENST00000505486 RRBP1Q9P2E9 1410 aaKnown RBP31.56■■■□□ 2.64
CASP6-205ENST00000505486 SHANK2Q9UPX8 1470 aa31.55■■■□□ 2.64
CASP6-205ENST00000505486 FBXO31Q5XUX0 539 aaPredicted RBP31.54■■■□□ 2.64
CASP6-205ENST00000505486 KIF3BO15066 747 aa31.53■■■□□ 2.64
CASP6-205ENST00000505486 CROCC2H7BZ55 1655 aa31.52■■■□□ 2.64
CASP6-205ENST00000505486 TNRQ92752 1358 aa31.5■■■□□ 2.63
CASP6-205ENST00000505486 KDM5DQ9BY66 1539 aa31.47■■■□□ 2.63
CASP6-205ENST00000505486 PZPP20742 1482 aa31.46■■■□□ 2.63
CASP6-205ENST00000505486 NEURL4Q96JN8 1562 aa31.44■■■□□ 2.62
CASP6-205ENST00000505486 WASHC2CQ9Y4E1 1318 aa31.44■■■□□ 2.62
CASP6-205ENST00000505486 ANKRD30AQ9BXX3 1397 aa31.41■■■□□ 2.62
CASP6-205ENST00000505486 FAM135AQ9P2D6 1515 aa31.39■■■□□ 2.62
CASP6-205ENST00000505486 CHIC2Q9UKJ5 165 aa31.39■■■□□ 2.62
CASP6-205ENST00000505486 ADGRL2O95490 1459 aa31.38■■■□□ 2.61
CASP6-205ENST00000505486 POLR1AO95602 1720 aaPredicted RBP31.38■■■□□ 2.61
CASP6-205ENST00000505486 KIF15Q9NS87 1388 aa31.36■■■□□ 2.61
CASP6-205ENST00000505486 SCAF1Q9H7N4 1312 aaKnown RBP31.36■■■□□ 2.61
CASP6-205ENST00000505486 ITGAEP38570 1179 aa31.36■■■□□ 2.61
CASP6-205ENST00000505486 PIP4K2BP78356 416 aa31.35■■■□□ 2.61
CASP6-205ENST00000505486 CPS1P31327 1500 aa31.34■■■□□ 2.61
CASP6-205ENST00000505486 RRP7BPQ9NSQ0 103 aa31.34■■■□□ 2.61
CASP6-205ENST00000505486 DUOX2Q9NRD8 1548 aa31.34■■■□□ 2.61
CASP6-205ENST00000505486 ANKLE2Q86XL3 938 aa31.33■■■□□ 2.61
CASP6-205ENST00000505486 HSPA1LP34931 641 aa31.32■■■□□ 2.6
CASP6-205ENST00000505486 NLRP1Q9C000 1473 aa31.32■■■□□ 2.6
CASP6-205ENST00000505486 ROCK1Q13464 1354 aa31.31■■■□□ 2.6
CASP6-205ENST00000505486 THEMISQ8N1K5 641 aaPredicted RBP31.31■■■□□ 2.6
CASP6-205ENST00000505486 UGGT1Q9NYU2 1555 aa31.3■■■□□ 2.6
CASP6-205ENST00000505486 VWDEQ8N2E2 1590 aa31.29■■■□□ 2.6
CASP6-205ENST00000505486 TOM1O60784 492 aa31.28■■■□□ 2.6
CASP6-205ENST00000505486 NPHP4O75161 1426 aaPredicted RBP31.27■■■□□ 2.6
CASP6-205ENST00000505486 ERBINQ96RT1 1412 aa31.26■■■□□ 2.6
CASP6-205ENST00000505486 MED14O60244 1454 aa31.25■■■□□ 2.59
CASP6-205ENST00000505486 EIF2AK4Q9P2K8 1649 aaKnown RBP31.24■■■□□ 2.59
CASP6-205ENST00000505486 ABCC3O15438 1527 aa31.24■■■□□ 2.59
CASP6-205ENST00000505486 RNF17Q9BXT8 1623 aaKnown RBP31.22■■■□□ 2.59
CASP6-205ENST00000505486 DEPDC5O75140 1603 aa31.21■■■□□ 2.59
CASP6-205ENST00000505486 MED1Q15648 1581 aaPredicted RBP31.2■■■□□ 2.58
CASP6-205ENST00000505486 ALKQ9UM73 1620 aa31.18■■■□□ 2.58
CASP6-205ENST00000505486 ANKRD50Q9ULJ7 1429 aa31.16■■■□□ 2.58
CASP6-205ENST00000505486 ERVK-7P63135 1459 aa31.16■■■□□ 2.58
CASP6-205ENST00000505486 IQGAP1P46940 1657 aa31.15■■■□□ 2.58
CASP6-205ENST00000505486 MROH1Q8NDA8 1641 aa31.14■■■□□ 2.58
CASP6-205ENST00000505486 ZC3H13Q5T200 1668 aaKnown RBP31.14■■■□□ 2.58
CASP6-205ENST00000505486 LRRC7Q96NW7 1537 aa31.08■■■□□ 2.57
CASP6-205ENST00000505486 STRCP1A6NGW2 1772 aa31.08■■■□□ 2.57
CASP6-205ENST00000505486 HFM1A2PYH4 1435 aa31.07■■■□□ 2.56
CASP6-205ENST00000505486 SENP3Q9H4L4 574 aaPredicted RBP31.06■■■□□ 2.56
CASP6-205ENST00000505486 CEP152O94986 1710 aa31.05■■■□□ 2.56
CASP6-205ENST00000505486 NAIPQ13075 1403 aa31.05■■■□□ 2.56
CASP6-205ENST00000505486 PRDM15P57071 1507 aaPredicted RBP31.04■■■□□ 2.56
CASP6-205ENST00000505486 KANK1Q14678 1352 aa31.03■■■□□ 2.56
CASP6-205ENST00000505486 GCC2Q8IWJ2 1684 aa31.03■■■□□ 2.56
CASP6-205ENST00000505486 UBR1Q8IWV7 1749 aa31.01■■■□□ 2.56
CASP6-205ENST00000505486 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.01■■■□□ 2.55
CASP6-205ENST00000505486 SCAF11Q99590 1463 aaKnown RBP31.01■■■□□ 2.55
CASP6-205ENST00000505486 LTKP29376 864 aa31■■■□□ 2.55
CASP6-205ENST00000505486 SYNMO15061 1565 aa31■■■□□ 2.55
CASP6-205ENST00000505486 PHF23Q9BUL5 403 aaPredicted RBP30.97■■■□□ 2.55
CASP6-205ENST00000505486 ARHGAP23Q9P227 1491 aa30.96■■■□□ 2.55
CASP6-205ENST00000505486 UNC13BO14795 1591 aa30.96■■■□□ 2.55
CASP6-205ENST00000505486 TXNDC2Q86VQ3 553 aa30.95■■■□□ 2.55
CASP6-205ENST00000505486 ARHGAP31Q2M1Z3 1444 aa30.95■■■□□ 2.54
CASP6-205ENST00000505486 SLIT1O75093 1534 aa30.94■■■□□ 2.54
CASP6-205ENST00000505486 CFAP65Q6ZU64 1925 aaKnown RBP30.94■■■□□ 2.54
CASP6-205ENST00000505486 LMTK2Q8IWU2 1503 aa30.89■■■□□ 2.54
CASP6-205ENST00000505486 SETD5Q9C0A6 1442 aa30.87■■■□□ 2.53
CASP6-205ENST00000505486 EID1Q9Y6B2 187 aa30.86■■■□□ 2.53
CASP6-205ENST00000505486 NUP155O75694 1391 aa30.86■■■□□ 2.53
CASP6-205ENST00000505486 PIK3C2BO00750 1634 aa30.85■■■□□ 2.53
CASP6-205ENST00000505486 TMEM2Q9UHN6 1383 aa30.84■■■□□ 2.53
CASP6-205ENST00000505486 ACIN1Q9UKV3 1341 aaKnown RBP30.83■■■□□ 2.53
CASP6-205ENST00000505486 TRIM26Q12899 539 aaPredicted RBP30.83■■■□□ 2.53
CASP6-205ENST00000505486 IQGAP3Q86VI3 1631 aa30.82■■■□□ 2.52
CASP6-205ENST00000505486 STAG3Q9UJ98 1225 aa30.8■■■□□ 2.52
CASP6-205ENST00000505486 EFCAB6Q5THR3 1501 aa30.79■■■□□ 2.52
CASP6-205ENST00000505486 XIRP1Q702N8 1843 aaKnown RBP30.79■■■□□ 2.52
CASP6-205ENST00000505486 IDI1Q13907 227 aa30.78■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms