RNA–Protein interactions for RNA: ENST00000505207.5

UBE2D3-219, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 5 BASIC

Gene UBE2D3, Length 527 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-219ENST00000505207 VPS8Q8N3P4 1428 aa17.55■□□□□ 0.4
UBE2D3-219ENST00000505207 MYO3AQ8NEV4 1616 aa17.54■□□□□ 0.4
UBE2D3-219ENST00000505207 A2ML1A8K2U0 1454 aa17.54■□□□□ 0.4
UBE2D3-219ENST00000505207 ZNF142P52746 1687 aaPredicted RBP17.54■□□□□ 0.4
UBE2D3-219ENST00000505207 TNRQ92752 1358 aa17.53■□□□□ 0.4
UBE2D3-219ENST00000505207 ZNF335Q9H4Z2 1342 aaPredicted RBP17.53■□□□□ 0.4
UBE2D3-219ENST00000505207 TCOF1Q13428 1488 aaKnown RBP17.53■□□□□ 0.4
UBE2D3-219ENST00000505207 DISP3Q9P2K9 1392 aa17.53■□□□□ 0.4
UBE2D3-219ENST00000505207 LOC105371045A0A1W2PR82 267 aa17.52■□□□□ 0.4
UBE2D3-219ENST00000505207 FBXO31Q5XUX0 539 aaPredicted RBP17.52■□□□□ 0.4
UBE2D3-219ENST00000505207 THEMISQ8N1K5 641 aaPredicted RBP17.52■□□□□ 0.4
UBE2D3-219ENST00000505207 KDM5DQ9BY66 1539 aa17.52■□□□□ 0.39
UBE2D3-219ENST00000505207 LRRC9Q6ZRR7 1453 aa17.51■□□□□ 0.39
UBE2D3-219ENST00000505207 UBAP1LF5GYI3 381 aa17.51■□□□□ 0.39
UBE2D3-219ENST00000505207 ARHGEF5Q12774 1597 aa17.51■□□□□ 0.39
UBE2D3-219ENST00000505207 PZPP20742 1482 aa17.5■□□□□ 0.39
UBE2D3-219ENST00000505207 APLP2Q06481 763 aa17.5■□□□□ 0.39
UBE2D3-219ENST00000505207 ANKLE2Q86XL3 938 aa17.5■□□□□ 0.39
UBE2D3-219ENST00000505207 MAP3K1Q13233 1512 aa17.48■□□□□ 0.39
UBE2D3-219ENST00000505207 MIA2Q96PC5 1412 aa17.47■□□□□ 0.39
UBE2D3-219ENST00000505207 NLRP1Q9C000 1473 aa17.46■□□□□ 0.39
UBE2D3-219ENST00000505207 DNMT1P26358 1616 aaKnown RBP17.46■□□□□ 0.39
UBE2D3-219ENST00000505207 KANK4Q5T7N3 995 aaPredicted RBP17.45■□□□□ 0.38
UBE2D3-219ENST00000505207 MYOM3Q5VTT5 1437 aa17.45■□□□□ 0.38
UBE2D3-219ENST00000505207 TOM1O60784 492 aa17.42■□□□□ 0.38
UBE2D3-219ENST00000505207 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.41■□□□□ 0.38
UBE2D3-219ENST00000505207 MAST1Q9Y2H9 1570 aa17.41■□□□□ 0.38
UBE2D3-219ENST00000505207 UGGT1Q9NYU2 1555 aa17.4■□□□□ 0.38
UBE2D3-219ENST00000505207 CPS1P31327 1500 aa17.39■□□□□ 0.37
UBE2D3-219ENST00000505207 SHANK2Q9UPX8 1470 aa17.37■□□□□ 0.37
UBE2D3-219ENST00000505207 SCAF1Q9H7N4 1312 aaKnown RBP17.37■□□□□ 0.37
UBE2D3-219ENST00000505207 NPHP4O75161 1426 aaPredicted RBP17.37■□□□□ 0.37
UBE2D3-219ENST00000505207 ABCC3O15438 1527 aa17.37■□□□□ 0.37
UBE2D3-219ENST00000505207 DUOX2Q9NRD8 1548 aa17.37■□□□□ 0.37
UBE2D3-219ENST00000505207 RNF17Q9BXT8 1623 aaKnown RBP17.36■□□□□ 0.37
UBE2D3-219ENST00000505207 EIF2AK4Q9P2K8 1649 aaKnown RBP17.36■□□□□ 0.37
UBE2D3-219ENST00000505207 SOCS7O14512 581 aa17.36■□□□□ 0.37
UBE2D3-219ENST00000505207 ILDR2Q71H61 639 aa17.36■□□□□ 0.37
UBE2D3-219ENST00000505207 ZC3H13Q5T200 1668 aaKnown RBP17.36■□□□□ 0.37
UBE2D3-219ENST00000505207 POLR1AO95602 1720 aaPredicted RBP17.35■□□□□ 0.37
UBE2D3-219ENST00000505207 MED14O60244 1454 aa17.35■□□□□ 0.37
UBE2D3-219ENST00000505207 SPATA31D1Q6ZQQ2 1576 aa17.35■□□□□ 0.37
UBE2D3-219ENST00000505207 PIP4K2BP78356 416 aa17.34■□□□□ 0.37
UBE2D3-219ENST00000505207 KIF15Q9NS87 1388 aa17.34■□□□□ 0.37
UBE2D3-219ENST00000505207 RRP7BPQ9NSQ0 103 aa17.34■□□□□ 0.37
UBE2D3-219ENST00000505207 NEURL4Q96JN8 1562 aa17.33■□□□□ 0.37
UBE2D3-219ENST00000505207 KANK1Q14678 1352 aa17.33■□□□□ 0.36
UBE2D3-219ENST00000505207 ADRA2BP18089 450 aa17.33■□□□□ 0.36
UBE2D3-219ENST00000505207 DEPDC5O75140 1603 aa17.32■□□□□ 0.36
UBE2D3-219ENST00000505207 ERVK-7P63135 1459 aa17.32■□□□□ 0.36
UBE2D3-219ENST00000505207 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.31■□□□□ 0.36
UBE2D3-219ENST00000505207 EID1Q9Y6B2 187 aa17.31■□□□□ 0.36
UBE2D3-219ENST00000505207 ERBINQ96RT1 1412 aa17.3■□□□□ 0.36
UBE2D3-219ENST00000505207 ABCC5O15440 1437 aa17.3■□□□□ 0.36
UBE2D3-219ENST00000505207 ARHGAP31Q2M1Z3 1444 aa17.3■□□□□ 0.36
UBE2D3-219ENST00000505207 STAG3Q9UJ98 1225 aa17.29■□□□□ 0.36
UBE2D3-219ENST00000505207 ANKRD30AQ9BXX3 1397 aa17.28■□□□□ 0.36
UBE2D3-219ENST00000505207 TXNDC2Q86VQ3 553 aa17.28■□□□□ 0.36
UBE2D3-219ENST00000505207 HSPA1LP34931 641 aa17.27■□□□□ 0.36
UBE2D3-219ENST00000505207 PTPN23Q9H3S7 1636 aa17.27■□□□□ 0.36
UBE2D3-219ENST00000505207 VWDEQ8N2E2 1590 aa17.27■□□□□ 0.35
UBE2D3-219ENST00000505207 DAPK1P53355 1430 aa17.26■□□□□ 0.35
UBE2D3-219ENST00000505207 FGD6Q6ZV73 1430 aa17.26■□□□□ 0.35
UBE2D3-219ENST00000505207 MROH1Q8NDA8 1641 aa17.25■□□□□ 0.35
UBE2D3-219ENST00000505207 CHIC2Q9UKJ5 165 aa17.25■□□□□ 0.35
UBE2D3-219ENST00000505207 IQGAP1P46940 1657 aa17.25■□□□□ 0.35
UBE2D3-219ENST00000505207 SCAF11Q99590 1463 aaKnown RBP17.24■□□□□ 0.35
UBE2D3-219ENST00000505207 PRDM15P57071 1507 aaPredicted RBP17.23■□□□□ 0.35
UBE2D3-219ENST00000505207 CEP152O94986 1710 aa17.23■□□□□ 0.35
UBE2D3-219ENST00000505207 CFAP65Q6ZU64 1925 aaKnown RBP17.22■□□□□ 0.35
UBE2D3-219ENST00000505207 LTKP29376 864 aa17.22■□□□□ 0.35
UBE2D3-219ENST00000505207 CROCC2H7BZ55 1655 aa17.2■□□□□ 0.34
UBE2D3-219ENST00000505207 SLIT1O75093 1534 aa17.2■□□□□ 0.34
UBE2D3-219ENST00000505207 ARHGAP23Q9P227 1491 aa17.19■□□□□ 0.34
UBE2D3-219ENST00000505207 UBR1Q8IWV7 1749 aa17.19■□□□□ 0.34
UBE2D3-219ENST00000505207 FAM50AQ14320 339 aaKnown RBP17.19■□□□□ 0.34
UBE2D3-219ENST00000505207 LRRC7Q96NW7 1537 aa17.19■□□□□ 0.34
UBE2D3-219ENST00000505207 TMEM2Q9UHN6 1383 aa17.18■□□□□ 0.34
UBE2D3-219ENST00000505207 IDI1Q13907 227 aa17.18■□□□□ 0.34
UBE2D3-219ENST00000505207 SLC52A1Q9NWF4 448 aa17.18■□□□□ 0.34
UBE2D3-219ENST00000505207 LMTK2Q8IWU2 1503 aa17.16■□□□□ 0.34
UBE2D3-219ENST00000505207 SYNMO15061 1565 aa17.16■□□□□ 0.34
UBE2D3-219ENST00000505207 HDGFP51858 240 aaKnown RBP17.16■□□□□ 0.34
UBE2D3-219ENST00000505207 EFCAB6Q5THR3 1501 aa17.13■□□□□ 0.33
UBE2D3-219ENST00000505207 BCANQ96GW7 911 aa17.13■□□□□ 0.33
UBE2D3-219ENST00000505207 ADGRL2O95490 1459 aa17.12■□□□□ 0.33
UBE2D3-219ENST00000505207 KCNA6P17658 529 aa17.12■□□□□ 0.33
UBE2D3-219ENST00000505207 ANKRD50Q9ULJ7 1429 aa17.12■□□□□ 0.33
UBE2D3-219ENST00000505207 PIK3C2BO00750 1634 aa17.11■□□□□ 0.33
UBE2D3-219ENST00000505207 MED1Q15648 1581 aaPredicted RBP17.11■□□□□ 0.33
UBE2D3-219ENST00000505207 KDM5AP29375 1690 aaKnown RBP17.1■□□□□ 0.33
UBE2D3-219ENST00000505207 NOS1P29475 1434 aa17.1■□□□□ 0.33
UBE2D3-219ENST00000505207 STRCP1A6NGW2 1772 aa17.1■□□□□ 0.33
UBE2D3-219ENST00000505207 PROSER2Q86WR7 435 aaPredicted RBP17.09■□□□□ 0.33
UBE2D3-219ENST00000505207 PIAS4Q8N2W9 510 aaPredicted RBP17.09■□□□□ 0.33
UBE2D3-219ENST00000505207 SLC26A8Q96RN1 970 aa17.09■□□□□ 0.33
UBE2D3-219ENST00000505207 RPRD2Q5VT52 1461 aaKnown RBP17.09■□□□□ 0.33
UBE2D3-219ENST00000505207 ALKQ9UM73 1620 aa17.07■□□□□ 0.32
UBE2D3-219ENST00000505207 PPP1R15AO75807 674 aaPredicted RBP17.07■□□□□ 0.32
UBE2D3-219ENST00000505207 FAM135BQ49AJ0 1406 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms