RNA–Protein interactions for RNA: ENST00000502751.5

LMNA-219, Transcript of lamin A/C, humanhuman

TSL 4

Gene LMNA, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-219ENST00000502751 FGD6Q6ZV73 1430 aa25.58■■□□□ 1.69
LMNA-219ENST00000502751 PTPRTO14522 1441 aa25.57■■□□□ 1.68
LMNA-219ENST00000502751 RRP7BPQ9NSQ0 103 aa25.56■■□□□ 1.68
LMNA-219ENST00000502751 PTPN23Q9H3S7 1636 aa25.55■■□□□ 1.68
LMNA-219ENST00000502751 KDM5DQ9BY66 1539 aa25.55■■□□□ 1.68
LMNA-219ENST00000502751 NCKAP5LQ9HCH0 1330 aa25.55■■□□□ 1.68
LMNA-219ENST00000502751 CAMSAP1Q5T5Y3 1602 aa25.54■■□□□ 1.68
LMNA-219ENST00000502751 TCOF1Q13428 1488 aaKnown RBP25.53■■□□□ 1.68
LMNA-219ENST00000502751 FAM135AQ9P2D6 1515 aa25.53■■□□□ 1.68
LMNA-219ENST00000502751 DAPK1P53355 1430 aa25.52■■□□□ 1.68
LMNA-219ENST00000502751 PZPP20742 1482 aa25.52■■□□□ 1.68
LMNA-219ENST00000502751 TNRQ92752 1358 aa25.51■■□□□ 1.67
LMNA-219ENST00000502751 MYO3AQ8NEV4 1616 aa25.5■■□□□ 1.67
LMNA-219ENST00000502751 KIF15Q9NS87 1388 aa25.5■■□□□ 1.67
LMNA-219ENST00000502751 CHIC2Q9UKJ5 165 aa25.5■■□□□ 1.67
LMNA-219ENST00000502751 DUOX2Q9NRD8 1548 aa25.49■■□□□ 1.67
LMNA-219ENST00000502751 SHANK2Q9UPX8 1470 aa25.49■■□□□ 1.67
LMNA-219ENST00000502751 CEP170BQ9Y4F5 1589 aaPredicted RBP25.48■■□□□ 1.67
LMNA-219ENST00000502751 PKD2Q13563 968 aa25.48■■□□□ 1.67
LMNA-219ENST00000502751 A2ML1A8K2U0 1454 aa25.47■■□□□ 1.67
LMNA-219ENST00000502751 RNF17Q9BXT8 1623 aaKnown RBP25.47■■□□□ 1.67
LMNA-219ENST00000502751 FAM50AQ14320 339 aaKnown RBP25.45■■□□□ 1.66
LMNA-219ENST00000502751 PLA2R1Q13018 1463 aa25.45■■□□□ 1.66
LMNA-219ENST00000502751 ZNF142P52746 1687 aaPredicted RBP25.45■■□□□ 1.66
LMNA-219ENST00000502751 EIF2AK4Q9P2K8 1649 aaKnown RBP25.45■■□□□ 1.66
LMNA-219ENST00000502751 ABCC3O15438 1527 aa25.44■■□□□ 1.66
LMNA-219ENST00000502751 DNMT1P26358 1616 aaKnown RBP25.44■■□□□ 1.66
LMNA-219ENST00000502751 ANKRD30AQ9BXX3 1397 aa25.43■■□□□ 1.66
LMNA-219ENST00000502751 MROH1Q8NDA8 1641 aa25.42■■□□□ 1.66
LMNA-219ENST00000502751 ERBINQ96RT1 1412 aa25.42■■□□□ 1.66
LMNA-219ENST00000502751 CROCC2H7BZ55 1655 aa25.42■■□□□ 1.66
LMNA-219ENST00000502751 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.41■■□□□ 1.666e-12■■■□□ 15.8
LMNA-219ENST00000502751 THEMISQ8N1K5 641 aaPredicted RBP25.39■■□□□ 1.66
LMNA-219ENST00000502751 NLRP1Q9C000 1473 aa25.36■■□□□ 1.65
LMNA-219ENST00000502751 LTBP4Q8N2S1 1624 aa25.36■■□□□ 1.65
LMNA-219ENST00000502751 PPARGC1BQ86YN6 1023 aaKnown RBP25.35■■□□□ 1.65
LMNA-219ENST00000502751 ZC3H13Q5T200 1668 aaKnown RBP25.35■■□□□ 1.65
LMNA-219ENST00000502751 ZNF335Q9H4Z2 1342 aaPredicted RBP25.35■■□□□ 1.65
LMNA-219ENST00000502751 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.34■■□□□ 1.65
LMNA-219ENST00000502751 ANKLE2Q86XL3 938 aa25.33■■□□□ 1.65
LMNA-219ENST00000502751 ERVK-7P63135 1459 aa25.33■■□□□ 1.65
LMNA-219ENST00000502751 SPATA31D1Q6ZQQ2 1576 aa25.32■■□□□ 1.64
LMNA-219ENST00000502751 PRDM15P57071 1507 aaPredicted RBP25.32■■□□□ 1.64
LMNA-219ENST00000502751 ARHGAP31Q2M1Z3 1444 aa25.31■■□□□ 1.64
LMNA-219ENST00000502751 ADGRL2O95490 1459 aa25.3■■□□□ 1.64
LMNA-219ENST00000502751 CEP152O94986 1710 aa25.3■■□□□ 1.64
LMNA-219ENST00000502751 UGGT1Q9NYU2 1555 aa25.3■■□□□ 1.64
LMNA-219ENST00000502751 KANK1Q14678 1352 aa25.3■■□□□ 1.64
LMNA-219ENST00000502751 CFAP65Q6ZU64 1925 aaKnown RBP25.27■■□□□ 1.64
LMNA-219ENST00000502751 DEPDC5O75140 1603 aa25.26■■□□□ 1.63
LMNA-219ENST00000502751 ANKRD50Q9ULJ7 1429 aa25.24■■□□□ 1.63
LMNA-219ENST00000502751 NEURL4Q96JN8 1562 aa25.22■■□□□ 1.63
LMNA-219ENST00000502751 VWDEQ8N2E2 1590 aa25.22■■□□□ 1.63
LMNA-219ENST00000502751 LMTK2Q8IWU2 1503 aa25.21■■□□□ 1.63
LMNA-219ENST00000502751 IQSEC2Q5JU85 1478 aa25.2■■□□□ 1.62
LMNA-219ENST00000502751 MED14O60244 1454 aa25.19■■□□□ 1.62
LMNA-219ENST00000502751 NPHP4O75161 1426 aaPredicted RBP25.19■■□□□ 1.62
LMNA-219ENST00000502751 ITGAEP38570 1179 aa25.18■■□□□ 1.62
LMNA-219ENST00000502751 IDI1Q13907 227 aa25.18■■□□□ 1.62
LMNA-219ENST00000502751 POLR1AO95602 1720 aaPredicted RBP25.17■■□□□ 1.62
LMNA-219ENST00000502751 ROCK1Q13464 1354 aa25.17■■□□□ 1.62
LMNA-219ENST00000502751 LTKP29376 864 aa25.16■■□□□ 1.62
LMNA-219ENST00000502751 TXNDC2Q86VQ3 553 aa25.15■■□□□ 1.62
LMNA-219ENST00000502751 UBR1Q8IWV7 1749 aa25.12■■□□□ 1.61
LMNA-219ENST00000502751 STAG3Q9UJ98 1225 aa25.12■■□□□ 1.61
LMNA-219ENST00000502751 NOS1P29475 1434 aa25.11■■□□□ 1.61
LMNA-219ENST00000502751 UBAP1LF5GYI3 381 aa25.1■■□□□ 1.61
LMNA-219ENST00000502751 ARHGAP23Q9P227 1491 aa25.09■■□□□ 1.61
LMNA-219ENST00000502751 EFCAB6Q5THR3 1501 aa25.09■■□□□ 1.61
LMNA-219ENST00000502751 SLC52A1Q9NWF4 448 aa25.08■■□□□ 1.61
LMNA-219ENST00000502751 EID1Q9Y6B2 187 aa25.08■■□□□ 1.61
LMNA-219ENST00000502751 SLIT1O75093 1534 aa25.07■■□□□ 1.6
LMNA-219ENST00000502751 TMEM2Q9UHN6 1383 aa25.07■■□□□ 1.6
LMNA-219ENST00000502751 SCAF11Q99590 1463 aaKnown RBP25.07■■□□□ 1.6
LMNA-219ENST00000502751 PIK3C2BO00750 1634 aa25.06■■□□□ 1.6
LMNA-219ENST00000502751 CPS1P31327 1500 aa25.06■■□□□ 1.6
LMNA-219ENST00000502751 SYNMO15061 1565 aa25.05■■□□□ 1.6
LMNA-219ENST00000502751 IQGAP1P46940 1657 aa25.05■■□□□ 1.6
LMNA-219ENST00000502751 RPRD2Q5VT52 1461 aaKnown RBP25.03■■□□□ 1.6
LMNA-219ENST00000502751 RRBP1Q9P2E9 1410 aaKnown RBP25.02■■□□□ 1.6
LMNA-219ENST00000502751 NUP155O75694 1391 aa25.01■■□□□ 1.59
LMNA-219ENST00000502751 UNC13BO14795 1591 aa25■■□□□ 1.59
LMNA-219ENST00000502751 TET3O43151 1660 aa24.98■■□□□ 1.59
LMNA-219ENST00000502751 TOM1O60784 492 aa24.97■■□□□ 1.59
LMNA-219ENST00000502751 KDM5AP29375 1690 aaKnown RBP24.96■■□□□ 1.59
LMNA-219ENST00000502751 STRCP1A6NGW2 1772 aa24.93■■□□□ 1.58
LMNA-219ENST00000502751 LRRC7Q96NW7 1537 aa24.93■■□□□ 1.58
LMNA-219ENST00000502751 PIP4K2BP78356 416 aa24.93■■□□□ 1.58
LMNA-219ENST00000502751 ADGRB3O60242 1522 aa24.92■■□□□ 1.58
LMNA-219ENST00000502751 SLC26A8Q96RN1 970 aa24.92■■□□□ 1.58
LMNA-219ENST00000502751 GCC2Q8IWJ2 1684 aa24.91■■□□□ 1.58
LMNA-219ENST00000502751 IQGAP3Q86VI3 1631 aa24.91■■□□□ 1.58
LMNA-219ENST00000502751 CHGAP10645 457 aaKnown RBP24.9■■□□□ 1.58
LMNA-219ENST00000502751 SCAF1Q9H7N4 1312 aaKnown RBP24.89■■□□□ 1.58
LMNA-219ENST00000502751 E9PCH4 1651 aa24.89■■□□□ 1.58
LMNA-219ENST00000502751 HDGFP51858 240 aaKnown RBP24.88■■□□□ 1.57
LMNA-219ENST00000502751 BCANQ96GW7 911 aa24.88■■□□□ 1.57
LMNA-219ENST00000502751 KCNA6P17658 529 aa24.87■■□□□ 1.57
LMNA-219ENST00000502751 NAIPQ13075 1403 aa24.86■■□□□ 1.57
LMNA-219ENST00000502751 SENP3Q9H4L4 574 aaPredicted RBP24.86■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms