RNA–Protein interactions for RNA: ENST00000496908.5

MECP2-211, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 1 (best)

Gene MECP2, Length 342 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-211ENST00000496908 DMRT2Q9Y5R5 561 aa21.78■■□□□ 1.08
MECP2-211ENST00000496908 PTPRTO14522 1441 aa21.78■■□□□ 1.08
MECP2-211ENST00000496908 FAM135AQ9P2D6 1515 aa21.77■■□□□ 1.08
MECP2-211ENST00000496908 APLP2Q06481 763 aa21.76■■□□□ 1.07
MECP2-211ENST00000496908 RNF17Q9BXT8 1623 aaKnown RBP21.76■■□□□ 1.07
MECP2-211ENST00000496908 PTPN23Q9H3S7 1636 aa21.76■■□□□ 1.07
MECP2-211ENST00000496908 PZPP20742 1482 aa21.74■■□□□ 1.07
MECP2-211ENST00000496908 CROCC2H7BZ55 1655 aa21.74■■□□□ 1.07
MECP2-211ENST00000496908 FBXO31Q5XUX0 539 aaPredicted RBP21.73■■□□□ 1.07
MECP2-211ENST00000496908 ABCC5O15440 1437 aa21.72■■□□□ 1.07
MECP2-211ENST00000496908 WASHC2CQ9Y4E1 1318 aa21.72■■□□□ 1.07
MECP2-211ENST00000496908 MROH1Q8NDA8 1641 aa21.72■■□□□ 1.07
MECP2-211ENST00000496908 EIF2AK4Q9P2K8 1649 aaKnown RBP21.72■■□□□ 1.07
MECP2-211ENST00000496908 FGD6Q6ZV73 1430 aa21.72■■□□□ 1.07
MECP2-211ENST00000496908 NCKAP5LQ9HCH0 1330 aa21.71■■□□□ 1.07
MECP2-211ENST00000496908 A2ML1A8K2U0 1454 aa21.71■■□□□ 1.07
MECP2-211ENST00000496908 PLA2R1Q13018 1463 aa21.71■■□□□ 1.07
MECP2-211ENST00000496908 TCOF1Q13428 1488 aaKnown RBP21.71■■□□□ 1.07
MECP2-211ENST00000496908 TNRQ92752 1358 aa21.7■■□□□ 1.06
MECP2-211ENST00000496908 SHANK2Q9UPX8 1470 aa21.7■■□□□ 1.06
MECP2-211ENST00000496908 ABCC3O15438 1527 aa21.7■■□□□ 1.06
MECP2-211ENST00000496908 DNMT1P26358 1616 aaKnown RBP21.69■■□□□ 1.06
MECP2-211ENST00000496908 DUOX2Q9NRD8 1548 aa21.68■■□□□ 1.06
MECP2-211ENST00000496908 LTBP4Q8N2S1 1624 aa21.68■■□□□ 1.06
MECP2-211ENST00000496908 DAPK1P53355 1430 aa21.67■■□□□ 1.06
MECP2-211ENST00000496908 ZC3H13Q5T200 1668 aaKnown RBP21.66■■□□□ 1.06
MECP2-211ENST00000496908 KIF15Q9NS87 1388 aa21.66■■□□□ 1.06
MECP2-211ENST00000496908 CEP152O94986 1710 aa21.63■■□□□ 1.05
MECP2-211ENST00000496908 PKD2Q13563 968 aa21.62■■□□□ 1.05
MECP2-211ENST00000496908 RRP7BPQ9NSQ0 103 aa21.62■■□□□ 1.05
MECP2-211ENST00000496908 ERBINQ96RT1 1412 aa21.61■■□□□ 1.05
MECP2-211ENST00000496908 PRDM15P57071 1507 aaPredicted RBP21.6■■□□□ 1.05
MECP2-211ENST00000496908 SPATA31D1Q6ZQQ2 1576 aa21.6■■□□□ 1.05
MECP2-211ENST00000496908 NLRP1Q9C000 1473 aa21.59■■□□□ 1.05
MECP2-211ENST00000496908 NEURL4Q96JN8 1562 aa21.59■■□□□ 1.05
MECP2-211ENST00000496908 ERVK-7P63135 1459 aa21.58■■□□□ 1.05
MECP2-211ENST00000496908 ZNF335Q9H4Z2 1342 aaPredicted RBP21.58■■□□□ 1.05
MECP2-211ENST00000496908 POLR1AO95602 1720 aaPredicted RBP21.58■■□□□ 1.04
MECP2-211ENST00000496908 CHIC2Q9UKJ5 165 aa21.57■■□□□ 1.04
MECP2-211ENST00000496908 DEPDC5O75140 1603 aa21.57■■□□□ 1.04
MECP2-211ENST00000496908 UGGT1Q9NYU2 1555 aa21.56■■□□□ 1.04
MECP2-211ENST00000496908 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.55■■□□□ 1.04
MECP2-211ENST00000496908 ANKRD30AQ9BXX3 1397 aa21.54■■□□□ 1.04
MECP2-211ENST00000496908 CFAP65Q6ZU64 1925 aaKnown RBP21.54■■□□□ 1.04
MECP2-211ENST00000496908 ADGRL2O95490 1459 aa21.52■■□□□ 1.04
MECP2-211ENST00000496908 IQSEC2Q5JU85 1478 aa21.52■■□□□ 1.04
MECP2-211ENST00000496908 ARHGAP31Q2M1Z3 1444 aa21.5■■□□□ 1.03
MECP2-211ENST00000496908 FAM50AQ14320 339 aaKnown RBP21.5■■□□□ 1.03
MECP2-211ENST00000496908 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.5■■□□□ 1.03
MECP2-211ENST00000496908 THEMISQ8N1K5 641 aaPredicted RBP21.49■■□□□ 1.03
MECP2-211ENST00000496908 VWDEQ8N2E2 1590 aa21.48■■□□□ 1.03
MECP2-211ENST00000496908 ANKLE2Q86XL3 938 aa21.47■■□□□ 1.03
MECP2-211ENST00000496908 UBR1Q8IWV7 1749 aa21.46■■□□□ 1.03
MECP2-211ENST00000496908 LMTK2Q8IWU2 1503 aa21.46■■□□□ 1.03
MECP2-211ENST00000496908 MED14O60244 1454 aa21.45■■□□□ 1.03
MECP2-211ENST00000496908 KANK1Q14678 1352 aa21.44■■□□□ 1.02
MECP2-211ENST00000496908 NPHP4O75161 1426 aaPredicted RBP21.44■■□□□ 1.02
MECP2-211ENST00000496908 IQGAP1P46940 1657 aa21.43■■□□□ 1.02
MECP2-211ENST00000496908 ANKRD50Q9ULJ7 1429 aa21.41■■□□□ 1.02
MECP2-211ENST00000496908 EFCAB6Q5THR3 1501 aa21.4■■□□□ 1.02
MECP2-211ENST00000496908 PIK3C2BO00750 1634 aa21.4■■□□□ 1.02
MECP2-211ENST00000496908 PPARGC1BQ86YN6 1023 aaKnown RBP21.39■■□□□ 1.01
MECP2-211ENST00000496908 SYNMO15061 1565 aa21.38■■□□□ 1.01
MECP2-211ENST00000496908 CPS1P31327 1500 aa21.38■■□□□ 1.01
MECP2-211ENST00000496908 ARHGAP23Q9P227 1491 aa21.38■■□□□ 1.01
MECP2-211ENST00000496908 SLIT1O75093 1534 aa21.37■■□□□ 1.01
MECP2-211ENST00000496908 SCAF11Q99590 1463 aaKnown RBP21.36■■□□□ 1.01
MECP2-211ENST00000496908 NOS1P29475 1434 aa21.35■■□□□ 1.01
MECP2-211ENST00000496908 STRCP1A6NGW2 1772 aa21.34■■□□□ 1.01
MECP2-211ENST00000496908 UBAP1LF5GYI3 381 aa21.34■■□□□ 1.01
MECP2-211ENST00000496908 LTKP29376 864 aa21.34■■□□□ 1.01
MECP2-211ENST00000496908 UNC13BO14795 1591 aa21.33■■□□□ 1.01
MECP2-211ENST00000496908 IDI1Q13907 227 aa21.32■■□□□ 1
MECP2-211ENST00000496908 ROCK1Q13464 1354 aa21.32■■□□□ 1
MECP2-211ENST00000496908 TET3O43151 1660 aa21.31■■□□□ 1
MECP2-211ENST00000496908 KDM5AP29375 1690 aaKnown RBP21.31■■□□□ 1
MECP2-211ENST00000496908 TXNDC2Q86VQ3 553 aa21.3■■□□□ 1
MECP2-211ENST00000496908 TMEM2Q9UHN6 1383 aa21.3■■□□□ 1
MECP2-211ENST00000496908 RPRD2Q5VT52 1461 aaKnown RBP21.28■■□□□ 1
MECP2-211ENST00000496908 ADGRB3O60242 1522 aa21.28■■□□□ 1
MECP2-211ENST00000496908 ITGAEP38570 1179 aa21.27■■□□□ 1
MECP2-211ENST00000496908 GCC2Q8IWJ2 1684 aa21.27■■□□□ 1
MECP2-211ENST00000496908 STAG3Q9UJ98 1225 aa21.26■□□□□ 0.99
MECP2-211ENST00000496908 ALKQ9UM73 1620 aa21.26■□□□□ 0.99
MECP2-211ENST00000496908 LRRC7Q96NW7 1537 aa21.25■□□□□ 0.99
MECP2-211ENST00000496908 EID1Q9Y6B2 187 aa21.24■□□□□ 0.99
MECP2-211ENST00000496908 E9PCH4 1651 aa21.24■□□□□ 0.99
MECP2-211ENST00000496908 IQGAP3Q86VI3 1631 aa21.23■□□□□ 0.99
MECP2-211ENST00000496908 SLC52A1Q9NWF4 448 aa21.22■□□□□ 0.99
MECP2-211ENST00000496908 MYO5BQ9ULV0 1848 aa21.21■□□□□ 0.99
MECP2-211ENST00000496908 PIP4K2BP78356 416 aa21.2■□□□□ 0.98
MECP2-211ENST00000496908 RRBP1Q9P2E9 1410 aaKnown RBP21.2■□□□□ 0.98
MECP2-211ENST00000496908 TOM1O60784 492 aa21.19■□□□□ 0.98
MECP2-211ENST00000496908 DISP3Q9P2K9 1392 aa21.19■□□□□ 0.98
MECP2-211ENST00000496908 SCAF1Q9H7N4 1312 aaKnown RBP21.18■□□□□ 0.98
MECP2-211ENST00000496908 TMEM131LA2VDJ0 1609 aa21.18■□□□□ 0.98
MECP2-211ENST00000496908 NUP155O75694 1391 aa21.17■□□□□ 0.98
MECP2-211ENST00000496908 XIRP1Q702N8 1843 aaKnown RBP21.17■□□□□ 0.98
MECP2-211ENST00000496908 ZFYVE9O95405 1425 aa21.16■□□□□ 0.98
MECP2-211ENST00000496908 HSPA1LP34931 641 aa21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms