RNA–Protein interactions for RNA: ENST00000494742.5

PCCB-219, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 4

Gene PCCB, Length 547 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-219ENST00000494742 ZNF335Q9H4Z2 1342 aaPredicted RBP23.38■■□□□ 1.33
PCCB-219ENST00000494742 ARHGEF5Q12774 1597 aa23.38■■□□□ 1.33
PCCB-219ENST00000494742 KIF3BO15066 747 aa23.37■■□□□ 1.33
PCCB-219ENST00000494742 PZPP20742 1482 aa23.36■■□□□ 1.33
PCCB-219ENST00000494742 SPATA31D1Q6ZQQ2 1576 aa23.33■■□□□ 1.33
PCCB-219ENST00000494742 TNRQ92752 1358 aa23.33■■□□□ 1.33
PCCB-219ENST00000494742 POLR1AO95602 1720 aaPredicted RBP23.33■■□□□ 1.32
PCCB-219ENST00000494742 TSPY4P0CV99 314 aa23.32■■□□□ 1.32
PCCB-219ENST00000494742 TSPY10P0CW01 314 aa23.32■■□□□ 1.32
PCCB-219ENST00000494742 WASHC2CQ9Y4E1 1318 aa23.32■■□□□ 1.32
PCCB-219ENST00000494742 UBAP1LF5GYI3 381 aa23.29■■□□□ 1.32
PCCB-219ENST00000494742 FBXO31Q5XUX0 539 aaPredicted RBP23.29■■□□□ 1.32
PCCB-219ENST00000494742 LRRC9Q6ZRR7 1453 aa23.29■■□□□ 1.32
PCCB-219ENST00000494742 ILDR2Q71H61 639 aa23.28■■□□□ 1.32
PCCB-219ENST00000494742 NLRP1Q9C000 1473 aa23.28■■□□□ 1.32
PCCB-219ENST00000494742 MAST1Q9Y2H9 1570 aa23.27■■□□□ 1.32
PCCB-219ENST00000494742 VPS8Q8N3P4 1428 aa23.27■■□□□ 1.32
PCCB-219ENST00000494742 NEURL4Q96JN8 1562 aa23.27■■□□□ 1.32
PCCB-219ENST00000494742 MIA2Q96PC5 1412 aa23.26■■□□□ 1.31
PCCB-219ENST00000494742 RNF17Q9BXT8 1623 aaKnown RBP23.26■■□□□ 1.31
PCCB-219ENST00000494742 CPS1P31327 1500 aa23.25■■□□□ 1.31
PCCB-219ENST00000494742 MAP3K1Q13233 1512 aa23.25■■□□□ 1.31
PCCB-219ENST00000494742 SOCS7O14512 581 aa23.25■■□□□ 1.31
PCCB-219ENST00000494742 THEMISQ8N1K5 641 aaPredicted RBP23.25■■□□□ 1.31
PCCB-219ENST00000494742 ZC3H13Q5T200 1668 aaKnown RBP23.25■■□□□ 1.31
PCCB-219ENST00000494742 EIF2AK4Q9P2K8 1649 aaKnown RBP23.23■■□□□ 1.31
PCCB-219ENST00000494742 ANKLE2Q86XL3 938 aa23.23■■□□□ 1.31
PCCB-219ENST00000494742 UGGT1Q9NYU2 1555 aa23.22■■□□□ 1.31
PCCB-219ENST00000494742 DEPDC5O75140 1603 aa23.22■■□□□ 1.31
PCCB-219ENST00000494742 SHANK2Q9UPX8 1470 aa23.21■■□□□ 1.31
PCCB-219ENST00000494742 MED14O60244 1454 aa23.2■■□□□ 1.3
PCCB-219ENST00000494742 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.2■■□□□ 1.3
PCCB-219ENST00000494742 ABCC3O15438 1527 aa23.18■■□□□ 1.3
PCCB-219ENST00000494742 MYOM3Q5VTT5 1437 aa23.16■■□□□ 1.3
PCCB-219ENST00000494742 VWDEQ8N2E2 1590 aa23.15■■□□□ 1.3
PCCB-219ENST00000494742 TOM1O60784 492 aa23.15■■□□□ 1.3
PCCB-219ENST00000494742 NPHP4O75161 1426 aaPredicted RBP23.15■■□□□ 1.3
PCCB-219ENST00000494742 MROH1Q8NDA8 1641 aa23.13■■□□□ 1.29
PCCB-219ENST00000494742 DUOX2Q9NRD8 1548 aa23.13■■□□□ 1.29
PCCB-219ENST00000494742 IQGAP1P46940 1657 aa23.13■■□□□ 1.29
PCCB-219ENST00000494742 KANK4Q5T7N3 995 aaPredicted RBP23.12■■□□□ 1.29
PCCB-219ENST00000494742 ERVK-7P63135 1459 aa23.11■■□□□ 1.29
PCCB-219ENST00000494742 LOC105371045A0A1W2PR82 267 aa23.1■■□□□ 1.29
PCCB-219ENST00000494742 CEP152O94986 1710 aa23.08■■□□□ 1.29
PCCB-219ENST00000494742 UBR1Q8IWV7 1749 aa23.06■■□□□ 1.28
PCCB-219ENST00000494742 PRDM15P57071 1507 aaPredicted RBP23.05■■□□□ 1.28
PCCB-219ENST00000494742 PIP4K2BP78356 416 aa23.05■■□□□ 1.28
PCCB-219ENST00000494742 CROCC2H7BZ55 1655 aa23.05■■□□□ 1.28
PCCB-219ENST00000494742 ARHGAP31Q2M1Z3 1444 aa23.05■■□□□ 1.28
PCCB-219ENST00000494742 ERBINQ96RT1 1412 aa23.05■■□□□ 1.28
PCCB-219ENST00000494742 SCAF1Q9H7N4 1312 aaKnown RBP23.05■■□□□ 1.28
PCCB-219ENST00000494742 HSPA1LP34931 641 aa23.04■■□□□ 1.28
PCCB-219ENST00000494742 KIF15Q9NS87 1388 aa23.02■■□□□ 1.28
PCCB-219ENST00000494742 SYNMO15061 1565 aa23.02■■□□□ 1.28
PCCB-219ENST00000494742 CFAP65Q6ZU64 1925 aaKnown RBP23.01■■□□□ 1.27
PCCB-219ENST00000494742 PTPN23Q9H3S7 1636 aa23■■□□□ 1.27
PCCB-219ENST00000494742 ABCC5O15440 1437 aa23■■□□□ 1.27
PCCB-219ENST00000494742 STRCP1A6NGW2 1772 aa23■■□□□ 1.27
PCCB-219ENST00000494742 ALKQ9UM73 1620 aa23■■□□□ 1.27
PCCB-219ENST00000494742 SCAF11Q99590 1463 aaKnown RBP22.99■■□□□ 1.27
PCCB-219ENST00000494742 SLIT1O75093 1534 aa22.99■■□□□ 1.27
PCCB-219ENST00000494742 LRRC7Q96NW7 1537 aa22.99■■□□□ 1.27
PCCB-219ENST00000494742 ARHGAP23Q9P227 1491 aa22.98■■□□□ 1.27
PCCB-219ENST00000494742 MED1Q15648 1581 aaPredicted RBP22.98■■□□□ 1.27
PCCB-219ENST00000494742 APLP2Q06481 763 aa22.98■■□□□ 1.27
PCCB-219ENST00000494742 DAPK1P53355 1430 aa22.96■■□□□ 1.27
PCCB-219ENST00000494742 RRP7BPQ9NSQ0 103 aa22.95■■□□□ 1.26
PCCB-219ENST00000494742 KANK1Q14678 1352 aa22.94■■□□□ 1.26
PCCB-219ENST00000494742 KDM5AP29375 1690 aaKnown RBP22.93■■□□□ 1.26
PCCB-219ENST00000494742 FGD6Q6ZV73 1430 aa22.93■■□□□ 1.26
PCCB-219ENST00000494742 TXNDC2Q86VQ3 553 aa22.92■■□□□ 1.26
PCCB-219ENST00000494742 EID1Q9Y6B2 187 aa22.92■■□□□ 1.26
PCCB-219ENST00000494742 LMTK2Q8IWU2 1503 aa22.92■■□□□ 1.26
PCCB-219ENST00000494742 PIK3C2BO00750 1634 aa22.91■■□□□ 1.26
PCCB-219ENST00000494742 LTKP29376 864 aa22.91■■□□□ 1.26
PCCB-219ENST00000494742 ANKRD30AQ9BXX3 1397 aa22.9■■□□□ 1.26
PCCB-219ENST00000494742 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.89■■□□□ 1.25
PCCB-219ENST00000494742 TMEM2Q9UHN6 1383 aa22.88■■□□□ 1.25
PCCB-219ENST00000494742 EFCAB6Q5THR3 1501 aa22.85■■□□□ 1.25
PCCB-219ENST00000494742 STAG3Q9UJ98 1225 aa22.84■■□□□ 1.25
PCCB-219ENST00000494742 XIRP1Q702N8 1843 aaKnown RBP22.84■■□□□ 1.25
PCCB-219ENST00000494742 ADGRL2O95490 1459 aa22.82■■□□□ 1.24
PCCB-219ENST00000494742 IDI1Q13907 227 aa22.81■■□□□ 1.24
PCCB-219ENST00000494742 NOS1P29475 1434 aa22.81■■□□□ 1.24
PCCB-219ENST00000494742 PHF23Q9BUL5 403 aaPredicted RBP22.8■■□□□ 1.24
PCCB-219ENST00000494742 CHIC2Q9UKJ5 165 aa22.8■■□□□ 1.24
PCCB-219ENST00000494742 TET3O43151 1660 aa22.78■■□□□ 1.24
PCCB-219ENST00000494742 SLC52A1Q9NWF4 448 aa22.77■■□□□ 1.24
PCCB-219ENST00000494742 RPRD2Q5VT52 1461 aaKnown RBP22.77■■□□□ 1.24
PCCB-219ENST00000494742 ADGRB3O60242 1522 aa22.77■■□□□ 1.24
PCCB-219ENST00000494742 KCNA6P17658 529 aa22.75■■□□□ 1.23
PCCB-219ENST00000494742 FAM135BQ49AJ0 1406 aa22.74■■□□□ 1.23
PCCB-219ENST00000494742 TMEM94Q12767 1356 aa22.72■■□□□ 1.23
PCCB-219ENST00000494742 ANKRD50Q9ULJ7 1429 aa22.72■■□□□ 1.23
PCCB-219ENST00000494742 NKTRP30414 1462 aaKnown RBP22.71■■□□□ 1.23
PCCB-219ENST00000494742 SENP3Q9H4L4 574 aaPredicted RBP22.7■■□□□ 1.22
PCCB-219ENST00000494742 NWD1Q149M9 1564 aa22.7■■□□□ 1.22
PCCB-219ENST00000494742 SLC26A8Q96RN1 970 aa22.69■■□□□ 1.22
PCCB-219ENST00000494742 FAM50AQ14320 339 aaKnown RBP22.67■■□□□ 1.22
PCCB-219ENST00000494742 PROSER2Q86WR7 435 aaPredicted RBP22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms