RNA–Protein interactions for RNA: ENST00000493271.1

SNRNP200-207, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 3

Gene SNRNP200, Length 585 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-207ENST00000493271 DNMT1P26358 1616 aaKnown RBP17.69■□□□□ 0.42
SNRNP200-207ENST00000493271 ZNF644Q9H582 1327 aaPredicted RBP17.68■□□□□ 0.42
SNRNP200-207ENST00000493271 KDM5DQ9BY66 1539 aa17.67■□□□□ 0.42
SNRNP200-207ENST00000493271 PZPP20742 1482 aa17.67■□□□□ 0.42
SNRNP200-207ENST00000493271 CPS1P31327 1500 aa17.66■□□□□ 0.42
SNRNP200-207ENST00000493271 TNRQ92752 1358 aa17.66■□□□□ 0.42
SNRNP200-207ENST00000493271 KIF3BO15066 747 aa17.64■□□□□ 0.41
SNRNP200-207ENST00000493271 POLR1AO95602 1720 aaPredicted RBP17.64■□□□□ 0.41
SNRNP200-207ENST00000493271 CAMSAP2Q08AD1 1489 aa17.63■□□□□ 0.41
SNRNP200-207ENST00000493271 NLRP1Q9C000 1473 aa17.63■□□□□ 0.41
SNRNP200-207ENST00000493271 WASHC2CQ9Y4E1 1318 aa17.62■□□□□ 0.41
SNRNP200-207ENST00000493271 NCOA2Q15596 1464 aa17.62■□□□□ 0.41
SNRNP200-207ENST00000493271 TOM1O60784 492 aa17.61■□□□□ 0.41
SNRNP200-207ENST00000493271 THEMISQ8N1K5 641 aaPredicted RBP17.61■□□□□ 0.41
SNRNP200-207ENST00000493271 ARHGEF5Q12774 1597 aa17.61■□□□□ 0.41
SNRNP200-207ENST00000493271 TSPY4P0CV99 314 aa17.6■□□□□ 0.41
SNRNP200-207ENST00000493271 TSPY10P0CW01 314 aa17.6■□□□□ 0.41
SNRNP200-207ENST00000493271 ANKLE2Q86XL3 938 aa17.6■□□□□ 0.41
SNRNP200-207ENST00000493271 NEURL4Q96JN8 1562 aa17.6■□□□□ 0.41
SNRNP200-207ENST00000493271 SHANK2Q9UPX8 1470 aa17.59■□□□□ 0.41
SNRNP200-207ENST00000493271 MIA2Q96PC5 1412 aa17.59■□□□□ 0.41
SNRNP200-207ENST00000493271 FBXO31Q5XUX0 539 aaPredicted RBP17.58■□□□□ 0.4
SNRNP200-207ENST00000493271 DEPDC5O75140 1603 aa17.58■□□□□ 0.4
SNRNP200-207ENST00000493271 MED14O60244 1454 aa17.57■□□□□ 0.4
SNRNP200-207ENST00000493271 UGGT1Q9NYU2 1555 aa17.57■□□□□ 0.4
SNRNP200-207ENST00000493271 ZC3H13Q5T200 1668 aaKnown RBP17.55■□□□□ 0.4
SNRNP200-207ENST00000493271 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.54■□□□□ 0.4
SNRNP200-207ENST00000493271 NPHP4O75161 1426 aaPredicted RBP17.54■□□□□ 0.4
SNRNP200-207ENST00000493271 RNF17Q9BXT8 1623 aaKnown RBP17.53■□□□□ 0.4
SNRNP200-207ENST00000493271 MAST1Q9Y2H9 1570 aa17.53■□□□□ 0.4
SNRNP200-207ENST00000493271 SCAF1Q9H7N4 1312 aaKnown RBP17.52■□□□□ 0.4
SNRNP200-207ENST00000493271 EIF2AK4Q9P2K8 1649 aaKnown RBP17.52■□□□□ 0.4
SNRNP200-207ENST00000493271 VWDEQ8N2E2 1590 aa17.52■□□□□ 0.39
SNRNP200-207ENST00000493271 HSPA1LP34931 641 aa17.5■□□□□ 0.39
SNRNP200-207ENST00000493271 PIP4K2BP78356 416 aa17.5■□□□□ 0.39
SNRNP200-207ENST00000493271 ABCC3O15438 1527 aa17.49■□□□□ 0.39
SNRNP200-207ENST00000493271 LRRC9Q6ZRR7 1453 aa17.49■□□□□ 0.39
SNRNP200-207ENST00000493271 IQGAP1P46940 1657 aa17.48■□□□□ 0.39
SNRNP200-207ENST00000493271 MED1Q15648 1581 aaPredicted RBP17.48■□□□□ 0.39
SNRNP200-207ENST00000493271 MAP3K1Q13233 1512 aa17.47■□□□□ 0.39
SNRNP200-207ENST00000493271 VPS8Q8N3P4 1428 aa17.47■□□□□ 0.39
SNRNP200-207ENST00000493271 SYNMO15061 1565 aa17.46■□□□□ 0.39
SNRNP200-207ENST00000493271 ERVK-7P63135 1459 aa17.46■□□□□ 0.39
SNRNP200-207ENST00000493271 MYOM3Q5VTT5 1437 aa17.44■□□□□ 0.38
SNRNP200-207ENST00000493271 DUOX2Q9NRD8 1548 aa17.43■□□□□ 0.38
SNRNP200-207ENST00000493271 MROH1Q8NDA8 1641 aa17.42■□□□□ 0.38
SNRNP200-207ENST00000493271 LRRC7Q96NW7 1537 aa17.42■□□□□ 0.38
SNRNP200-207ENST00000493271 ARHGAP31Q2M1Z3 1444 aa17.41■□□□□ 0.38
SNRNP200-207ENST00000493271 SCAF11Q99590 1463 aaKnown RBP17.41■□□□□ 0.38
SNRNP200-207ENST00000493271 ALKQ9UM73 1620 aa17.4■□□□□ 0.38
SNRNP200-207ENST00000493271 UBR1Q8IWV7 1749 aa17.39■□□□□ 0.37
SNRNP200-207ENST00000493271 SLIT1O75093 1534 aa17.39■□□□□ 0.37
SNRNP200-207ENST00000493271 PHF23Q9BUL5 403 aaPredicted RBP17.39■□□□□ 0.37
SNRNP200-207ENST00000493271 ERBINQ96RT1 1412 aa17.38■□□□□ 0.37
SNRNP200-207ENST00000493271 PRDM15P57071 1507 aaPredicted RBP17.38■□□□□ 0.37
SNRNP200-207ENST00000493271 ARHGAP23Q9P227 1491 aa17.37■□□□□ 0.37
SNRNP200-207ENST00000493271 CEP152O94986 1710 aa17.37■□□□□ 0.37
SNRNP200-207ENST00000493271 STRCP1A6NGW2 1772 aa17.35■□□□□ 0.37
SNRNP200-207ENST00000493271 EID1Q9Y6B2 187 aa17.35■□□□□ 0.37
SNRNP200-207ENST00000493271 KIF15Q9NS87 1388 aa17.35■□□□□ 0.37
SNRNP200-207ENST00000493271 KANK1Q14678 1352 aa17.33■□□□□ 0.36
SNRNP200-207ENST00000493271 KANK4Q5T7N3 995 aaPredicted RBP17.33■□□□□ 0.36
SNRNP200-207ENST00000493271 TXNDC2Q86VQ3 553 aa17.33■□□□□ 0.36
SNRNP200-207ENST00000493271 CROCC2H7BZ55 1655 aa17.32■□□□□ 0.36
SNRNP200-207ENST00000493271 KDM5AP29375 1690 aaKnown RBP17.32■□□□□ 0.36
SNRNP200-207ENST00000493271 LTKP29376 864 aa17.3■□□□□ 0.36
SNRNP200-207ENST00000493271 ABCC5O15440 1437 aa17.3■□□□□ 0.36
SNRNP200-207ENST00000493271 TMEM2Q9UHN6 1383 aa17.29■□□□□ 0.36
SNRNP200-207ENST00000493271 LMTK2Q8IWU2 1503 aa17.28■□□□□ 0.36
SNRNP200-207ENST00000493271 STAG3Q9UJ98 1225 aa17.28■□□□□ 0.36
SNRNP200-207ENST00000493271 PTPN23Q9H3S7 1636 aa17.28■□□□□ 0.36
SNRNP200-207ENST00000493271 PIK3C2BO00750 1634 aa17.27■□□□□ 0.36
SNRNP200-207ENST00000493271 DAPK1P53355 1430 aa17.27■□□□□ 0.35
SNRNP200-207ENST00000493271 FAM135BQ49AJ0 1406 aa17.27■□□□□ 0.35
SNRNP200-207ENST00000493271 EFCAB6Q5THR3 1501 aa17.26■□□□□ 0.35
SNRNP200-207ENST00000493271 CFAP65Q6ZU64 1925 aaKnown RBP17.26■□□□□ 0.35
SNRNP200-207ENST00000493271 APLP2Q06481 763 aa17.26■□□□□ 0.35
SNRNP200-207ENST00000493271 RRP7BPQ9NSQ0 103 aa17.26■□□□□ 0.35
SNRNP200-207ENST00000493271 ANKRD30AQ9BXX3 1397 aa17.26■□□□□ 0.35
SNRNP200-207ENST00000493271 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.23■□□□□ 0.35
SNRNP200-207ENST00000493271 FGD6Q6ZV73 1430 aa17.22■□□□□ 0.35
SNRNP200-207ENST00000493271 XIRP1Q702N8 1843 aaKnown RBP17.22■□□□□ 0.35
SNRNP200-207ENST00000493271 KCNA6P17658 529 aa17.22■□□□□ 0.35
SNRNP200-207ENST00000493271 NKTRP30414 1462 aaKnown RBP17.21■□□□□ 0.35
SNRNP200-207ENST00000493271 LOC105371045A0A1W2PR82 267 aa17.21■□□□□ 0.35
SNRNP200-207ENST00000493271 IDI1Q13907 227 aa17.21■□□□□ 0.35
SNRNP200-207ENST00000493271 SLC52A1Q9NWF4 448 aa17.21■□□□□ 0.35
SNRNP200-207ENST00000493271 NOS1P29475 1434 aa17.21■□□□□ 0.34
SNRNP200-207ENST00000493271 TMEM94Q12767 1356 aa17.2■□□□□ 0.34
SNRNP200-207ENST00000493271 TET3O43151 1660 aa17.2■□□□□ 0.34
SNRNP200-207ENST00000493271 SENP3Q9H4L4 574 aaPredicted RBP17.19■□□□□ 0.34
SNRNP200-207ENST00000493271 ADGRB3O60242 1522 aa17.19■□□□□ 0.34
SNRNP200-207ENST00000493271 RPRD2Q5VT52 1461 aaKnown RBP17.18■□□□□ 0.34
SNRNP200-207ENST00000493271 NWD1Q149M9 1564 aa17.18■□□□□ 0.34
SNRNP200-207ENST00000493271 ADGRL2O95490 1459 aa17.18■□□□□ 0.34
SNRNP200-207ENST00000493271 PROSER2Q86WR7 435 aaPredicted RBP17.16■□□□□ 0.34
SNRNP200-207ENST00000493271 HDGFP51858 240 aaKnown RBP17.15■□□□□ 0.34
SNRNP200-207ENST00000493271 RGS17Q9UGC6 210 aaPredicted RBP17.15■□□□□ 0.34
SNRNP200-207ENST00000493271 SLC26A8Q96RN1 970 aa17.14■□□□□ 0.33
SNRNP200-207ENST00000493271 MSH6P52701 1360 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms