RNA–Protein interactions for RNA: ENST00000488759.5

LRMDA-205, Transcript of leucine rich melanocyte differentiation associated, humanhuman

TSL 3

Gene LRMDA, Length 337 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRMDA-205ENST00000488759 PTPRKQ15262 1439 aa16.76■□□□□ 0.27
LRMDA-205ENST00000488759 MYOM3Q5VTT5 1437 aa16.76■□□□□ 0.27
LRMDA-205ENST00000488759 RSPH4AQ5TD94 716 aa16.75■□□□□ 0.27
LRMDA-205ENST00000488759 ZC3H13Q5T200 1668 aaKnown RBP16.75■□□□□ 0.27
LRMDA-205ENST00000488759 NCKAP5LQ9HCH0 1330 aa16.74■□□□□ 0.27
LRMDA-205ENST00000488759 KANK4Q5T7N3 995 aaPredicted RBP16.73■□□□□ 0.27
LRMDA-205ENST00000488759 PTPN23Q9H3S7 1636 aa16.73■□□□□ 0.27
LRMDA-205ENST00000488759 EIF2AK4Q9P2K8 1649 aaKnown RBP16.73■□□□□ 0.27
LRMDA-205ENST00000488759 MAST1Q9Y2H9 1570 aa16.72■□□□□ 0.27
LRMDA-205ENST00000488759 MAP3K1Q13233 1512 aa16.72■□□□□ 0.27
LRMDA-205ENST00000488759 FAM135AQ9P2D6 1515 aa16.72■□□□□ 0.27
LRMDA-205ENST00000488759 TNRQ92752 1358 aa16.72■□□□□ 0.27
LRMDA-205ENST00000488759 A2ML1A8K2U0 1454 aa16.72■□□□□ 0.27
LRMDA-205ENST00000488759 DNMT1P26358 1616 aaKnown RBP16.71■□□□□ 0.27
LRMDA-205ENST00000488759 RNF17Q9BXT8 1623 aaKnown RBP16.71■□□□□ 0.27
LRMDA-205ENST00000488759 PPP6R1Q9UPN7 881 aa16.71■□□□□ 0.27
LRMDA-205ENST00000488759 PZPP20742 1482 aa16.7■□□□□ 0.26
LRMDA-205ENST00000488759 PLA2R1Q13018 1463 aa16.69■□□□□ 0.26
LRMDA-205ENST00000488759 MIA2Q96PC5 1412 aa16.69■□□□□ 0.26
LRMDA-205ENST00000488759 PKD2Q13563 968 aa16.67■□□□□ 0.26
LRMDA-205ENST00000488759 DUOX2Q9NRD8 1548 aa16.66■□□□□ 0.26
LRMDA-205ENST00000488759 FBXO31Q5XUX0 539 aaPredicted RBP16.66■□□□□ 0.26
LRMDA-205ENST00000488759 ZNF335Q9H4Z2 1342 aaPredicted RBP16.66■□□□□ 0.26
LRMDA-205ENST00000488759 SCAF1Q9H7N4 1312 aaKnown RBP16.66■□□□□ 0.26
LRMDA-205ENST00000488759 ABCC3O15438 1527 aa16.65■□□□□ 0.26
LRMDA-205ENST00000488759 UGGT1Q9NYU2 1555 aa16.65■□□□□ 0.26
LRMDA-205ENST00000488759 LTBP4Q8N2S1 1624 aa16.65■□□□□ 0.26
LRMDA-205ENST00000488759 KIF15Q9NS87 1388 aa16.64■□□□□ 0.25
LRMDA-205ENST00000488759 TCOF1Q13428 1488 aaKnown RBP16.63■□□□□ 0.25
LRMDA-205ENST00000488759 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.63■□□□□ 0.25
LRMDA-205ENST00000488759 NLRP1Q9C000 1473 aa16.62■□□□□ 0.25
LRMDA-205ENST00000488759 RRP7BPQ9NSQ0 103 aa16.62■□□□□ 0.25
LRMDA-205ENST00000488759 SHANK2Q9UPX8 1470 aa16.61■□□□□ 0.25
LRMDA-205ENST00000488759 IQGAP1P46940 1657 aa16.61■□□□□ 0.25
LRMDA-205ENST00000488759 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.61■□□□□ 0.25
LRMDA-205ENST00000488759 FGD6Q6ZV73 1430 aa16.61■□□□□ 0.25
LRMDA-205ENST00000488759 UBAP1LF5GYI3 381 aa16.6■□□□□ 0.25
LRMDA-205ENST00000488759 FAM50AQ14320 339 aaKnown RBP16.6■□□□□ 0.25
LRMDA-205ENST00000488759 CHIC2Q9UKJ5 165 aa16.6■□□□□ 0.25
LRMDA-205ENST00000488759 KANK1Q14678 1352 aa16.6■□□□□ 0.25
LRMDA-205ENST00000488759 DISP3Q9P2K9 1392 aa16.6■□□□□ 0.25
LRMDA-205ENST00000488759 DAPK1P53355 1430 aa16.6■□□□□ 0.25
LRMDA-205ENST00000488759 IQSEC2Q5JU85 1478 aa16.6■□□□□ 0.25
LRMDA-205ENST00000488759 SPATA31D1Q6ZQQ2 1576 aa16.6■□□□□ 0.25
LRMDA-205ENST00000488759 MROH1Q8NDA8 1641 aa16.59■□□□□ 0.25
LRMDA-205ENST00000488759 NEURL4Q96JN8 1562 aa16.59■□□□□ 0.25
LRMDA-205ENST00000488759 ANKLE2Q86XL3 938 aa16.58■□□□□ 0.24
LRMDA-205ENST00000488759 THEMISQ8N1K5 641 aaPredicted RBP16.58■□□□□ 0.24
LRMDA-205ENST00000488759 ERBINQ96RT1 1412 aa16.58■□□□□ 0.24
LRMDA-205ENST00000488759 ERVK-7P63135 1459 aa16.58■□□□□ 0.24
LRMDA-205ENST00000488759 PRDM15P57071 1507 aaPredicted RBP16.58■□□□□ 0.24
LRMDA-205ENST00000488759 UBR1Q8IWV7 1749 aa16.56■□□□□ 0.24
LRMDA-205ENST00000488759 ABCC5O15440 1437 aa16.56■□□□□ 0.24
LRMDA-205ENST00000488759 ANKRD30AQ9BXX3 1397 aa16.56■□□□□ 0.24
LRMDA-205ENST00000488759 STAG3Q9UJ98 1225 aa16.56■□□□□ 0.24
LRMDA-205ENST00000488759 DEPDC5O75140 1603 aa16.55■□□□□ 0.24
LRMDA-205ENST00000488759 NPHP4O75161 1426 aaPredicted RBP16.54■□□□□ 0.24
LRMDA-205ENST00000488759 CPS1P31327 1500 aa16.54■□□□□ 0.24
LRMDA-205ENST00000488759 PIP4K2BP78356 416 aa16.53■□□□□ 0.24
LRMDA-205ENST00000488759 SENP3Q9H4L4 574 aaPredicted RBP16.51■□□□□ 0.23
LRMDA-205ENST00000488759 PIK3C2BO00750 1634 aa16.51■□□□□ 0.23
LRMDA-205ENST00000488759 SYNMO15061 1565 aa16.47■□□□□ 0.23
LRMDA-205ENST00000488759 SCAF11Q99590 1463 aaKnown RBP16.47■□□□□ 0.23
LRMDA-205ENST00000488759 VWDEQ8N2E2 1590 aa16.47■□□□□ 0.23
LRMDA-205ENST00000488759 BCANQ96GW7 911 aa16.46■□□□□ 0.23
LRMDA-205ENST00000488759 EID1Q9Y6B2 187 aa16.46■□□□□ 0.23
LRMDA-205ENST00000488759 TOM1O60784 492 aa16.45■□□□□ 0.22
LRMDA-205ENST00000488759 ITGAEP38570 1179 aa16.45■□□□□ 0.22
LRMDA-205ENST00000488759 EFCAB6Q5THR3 1501 aa16.45■□□□□ 0.22
LRMDA-205ENST00000488759 STRCP1A6NGW2 1772 aa16.44■□□□□ 0.22
LRMDA-205ENST00000488759 MYO5BQ9ULV0 1848 aa16.43■□□□□ 0.22
LRMDA-205ENST00000488759 PPARGC1BQ86YN6 1023 aaKnown RBP16.43■□□□□ 0.22
LRMDA-205ENST00000488759 GCC2Q8IWJ2 1684 aa16.43■□□□□ 0.22
LRMDA-205ENST00000488759 MED14O60244 1454 aa16.42■□□□□ 0.22
LRMDA-205ENST00000488759 TXNDC2Q86VQ3 553 aa16.42■□□□□ 0.22
LRMDA-205ENST00000488759 ARHGAP31Q2M1Z3 1444 aa16.42■□□□□ 0.22
LRMDA-205ENST00000488759 TET3O43151 1660 aa16.41■□□□□ 0.22
LRMDA-205ENST00000488759 ADGRL2O95490 1459 aa16.41■□□□□ 0.22
LRMDA-205ENST00000488759 ADGRB3O60242 1522 aa16.4■□□□□ 0.22
LRMDA-205ENST00000488759 ANKRD50Q9ULJ7 1429 aa16.4■□□□□ 0.22
LRMDA-205ENST00000488759 KDM5AP29375 1690 aaKnown RBP16.39■□□□□ 0.21
LRMDA-205ENST00000488759 PPP1R15AO75807 674 aaPredicted RBP16.38■□□□□ 0.21
LRMDA-205ENST00000488759 SLIT1O75093 1534 aa16.38■□□□□ 0.21
LRMDA-205ENST00000488759 LMTK2Q8IWU2 1503 aa16.38■□□□□ 0.21
LRMDA-205ENST00000488759 CHGAP10645 457 aaKnown RBP16.37■□□□□ 0.21
LRMDA-205ENST00000488759 UNC13BO14795 1591 aa16.36■□□□□ 0.21
LRMDA-205ENST00000488759 HSPA1LP34931 641 aa16.35■□□□□ 0.21
LRMDA-205ENST00000488759 ARHGAP23Q9P227 1491 aa16.35■□□□□ 0.21
LRMDA-205ENST00000488759 LRRC7Q96NW7 1537 aa16.35■□□□□ 0.21
LRMDA-205ENST00000488759 PHF23Q9BUL5 403 aaPredicted RBP16.34■□□□□ 0.21
LRMDA-205ENST00000488759 TMEM2Q9UHN6 1383 aa16.34■□□□□ 0.21
LRMDA-205ENST00000488759 LTKP29376 864 aa16.33■□□□□ 0.2
LRMDA-205ENST00000488759 MED1Q15648 1581 aaPredicted RBP16.33■□□□□ 0.2
LRMDA-205ENST00000488759 E9PCH4 1651 aa16.33■□□□□ 0.2
LRMDA-205ENST00000488759 XIRP1Q702N8 1843 aaKnown RBP16.33■□□□□ 0.2
LRMDA-205ENST00000488759 RPRD2Q5VT52 1461 aaKnown RBP16.32■□□□□ 0.2
LRMDA-205ENST00000488759 ILDR2Q71H61 639 aa16.32■□□□□ 0.2
LRMDA-205ENST00000488759 IDI1Q13907 227 aa16.31■□□□□ 0.2
LRMDA-205ENST00000488759 IQGAP3Q86VI3 1631 aa16.3■□□□□ 0.2
LRMDA-205ENST00000488759 SLC26A8Q96RN1 970 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms