RNA–Protein interactions for RNA: ENST00000488759.5

LRMDA-205, Transcript of leucine rich melanocyte differentiation associated, human

TSL 3

Gene LRMDA, Length 337 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LRMDA-205	ENST00000488759	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	13.14	□□□□□ -0.31	1e-22	■■■■■ 153.9
LRMDA-205	ENST00000488759	MATR3	P43243	847 aa	Known RBP eCLIP	11.82	□□□□□ -0.52	1e-10	■■■■■ 34.3
LRMDA-205	ENST00000488759	PTBP1	P26599	531 aa	Known RBP eCLIP	8.02	□□□□□ -1.13	6e-10	■■■■■ 38.2
LRMDA-205	ENST00000488759	HNRNPL	P14866	589 aa	Known RBP eCLIP	11.22	□□□□□ -0.61	4e-9	■■■■■ 27.2
LRMDA-205	ENST00000488759	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	15.15	■□□□□ 0.02	1e-8	■■■■■ 29.5
LRMDA-205	ENST00000488759	AGGF1	Q8N302	714 aa	eCLIP	10.07	□□□□□ -0.8	4e-8	■□□□□ 11.1
LRMDA-205	ENST00000488759	RBFOX2	O43251	390 aa	Known RBP eCLIP	8.04	□□□□□ -1.12	7e-7	■■■□□ 17.9
LRMDA-205	ENST00000488759	HNRNPM	P52272	730 aa	Known RBP eCLIP	17.04	■□□□□ 0.32	1e-6	■■□□□ 13.1
LRMDA-205	ENST00000488759	QKI	Q96PU8	341 aa	Known RBP eCLIP	10.5	□□□□□ -0.73	2e-6	■■■□□ 15.7

Retrieved 9 of 9 RNA–protein pairs in 6.4 ms