RNA–Protein interactions for RNA: ENST00000488759.5

LRMDA-205, Transcript of leucine rich melanocyte differentiation associated, humanhuman

TSL 3

Gene LRMDA, Length 337 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRMDA-205ENST00000488759 NISCHQ9Y2I1 1504 aa26.39■■□□□ 1.81
LRMDA-205ENST00000488759 CCDC180Q9P1Z9 1646 aa23.77■■□□□ 1.4
LRMDA-205ENST00000488759 ABCC9O60706 1549 aa23.69■■□□□ 1.38
LRMDA-205ENST00000488759 RB1CC1Q8TDY2 1594 aa22.59■■□□□ 1.21
LRMDA-205ENST00000488759 DCAF8L2P0C7V8 631 aa22.45■■□□□ 1.18
LRMDA-205ENST00000488759 NACADO15069 1562 aa22.38■■□□□ 1.17
LRMDA-205ENST00000488759 UNC13AQ9UPW8 1703 aa22.16■■□□□ 1.14
LRMDA-205ENST00000488759 PABPN1Q86U42 306 aaKnown RBP eCLIP22.02■■□□□ 1.12
LRMDA-205ENST00000488759 MYO15BQ96JP2 1530 aa21.94■■□□□ 1.1
LRMDA-205ENST00000488759 ZCCHC6Q5VYS8 1495 aaKnown RBP21.9■■□□□ 1.1
LRMDA-205ENST00000488759 DNAJC5BQ9UF47 199 aa21.89■■□□□ 1.09
LRMDA-205ENST00000488759 BICRAQ9NZM4 1560 aa21.78■■□□□ 1.08
LRMDA-205ENST00000488759 SCRIBQ14160 1630 aa21.77■■□□□ 1.07
LRMDA-205ENST00000488759 DCAF1Q9Y4B6 1507 aa21.72■■□□□ 1.07
LRMDA-205ENST00000488759 SHROOM4Q9ULL8 1493 aa21.51■■□□□ 1.03
LRMDA-205ENST00000488759 CC2D2AQ9P2K1 1620 aa21.4■■□□□ 1.02
LRMDA-205ENST00000488759 EIF4G1Q04637 1599 aaKnown RBP21.33■■□□□ 1.01
LRMDA-205ENST00000488759 CECR2Q9BXF3 1484 aa21.3■■□□□ 1
LRMDA-205ENST00000488759 SMARCA4P51532 1647 aa20.67■□□□□ 0.9
LRMDA-205ENST00000488759 SMARCA2P51531 1590 aa20.6■□□□□ 0.89
LRMDA-205ENST00000488759 BAZ1AQ9NRL2 1556 aaPredicted RBP20.56■□□□□ 0.88
LRMDA-205ENST00000488759 ERCC6Q03468 1493 aa20.56■□□□□ 0.88
LRMDA-205ENST00000488759 ATAD2BQ9ULI0 1458 aa20.55■□□□□ 0.88
LRMDA-205ENST00000488759 NCAPD3P42695 1498 aa20.53■□□□□ 0.88
LRMDA-205ENST00000488759 HMGXB3Q12766 1538 aa20.52■□□□□ 0.87
LRMDA-205ENST00000488759 BAZ1BQ9UIG0 1483 aaKnown RBP20.5■□□□□ 0.87
LRMDA-205ENST00000488759 MROH2BQ7Z745 1585 aa20.35■□□□□ 0.85
LRMDA-205ENST00000488759 NESP48681 1621 aa20.33■□□□□ 0.84
LRMDA-205ENST00000488759 CUX2O14529 1486 aa20.32■□□□□ 0.84
LRMDA-205ENST00000488759 PEG3Q9GZU2 1588 aa20.32■□□□□ 0.84
LRMDA-205ENST00000488759 WIZO95785 1651 aa20.22■□□□□ 0.83
LRMDA-205ENST00000488759 KIF21AQ7Z4S6 1674 aa20.22■□□□□ 0.83
LRMDA-205ENST00000488759 LAMC3Q9Y6N6 1575 aa20.21■□□□□ 0.83
LRMDA-205ENST00000488759 THOC2Q8NI27 1593 aaKnown RBP20.13■□□□□ 0.81
LRMDA-205ENST00000488759 DNAJC5Q9H3Z4 198 aa20.08■□□□□ 0.81
LRMDA-205ENST00000488759 PDS5BQ9NTI5 1447 aa20.08■□□□□ 0.8
LRMDA-205ENST00000488759 CADPSQ9ULU8 1353 aa19.96■□□□□ 0.79
LRMDA-205ENST00000488759 TOP2AP11388 1531 aaKnown RBP19.93■□□□□ 0.78
LRMDA-205ENST00000488759 MRC2Q9UBG0 1479 aa19.92■□□□□ 0.78
LRMDA-205ENST00000488759 CEP164Q9UPV0 1460 aa19.91■□□□□ 0.78
LRMDA-205ENST00000488759 RSF1Q96T23 1441 aaPredicted RBP19.9■□□□□ 0.78
LRMDA-205ENST00000488759 PRDM2Q13029 1718 aa19.85■□□□□ 0.77
LRMDA-205ENST00000488759 WDR62O43379 1518 aa19.84■□□□□ 0.77
LRMDA-205ENST00000488759 FANCD2Q9BXW9 1451 aa19.84■□□□□ 0.77
LRMDA-205ENST00000488759 CFTRP13569 1480 aa19.74■□□□□ 0.75
LRMDA-205ENST00000488759 URB2Q14146 1524 aaKnown RBP19.63■□□□□ 0.73
LRMDA-205ENST00000488759 CCDC88BA6NC98 1476 aa19.63■□□□□ 0.73
LRMDA-205ENST00000488759 TRIM41Q8WV44 630 aa19.52■□□□□ 0.72
LRMDA-205ENST00000488759 TOPBP1Q92547 1522 aa19.46■□□□□ 0.71
LRMDA-205ENST00000488759 DNMBPQ6XZF7 1577 aa19.44■□□□□ 0.7
LRMDA-205ENST00000488759 IFT140Q96RY7 1462 aa19.43■□□□□ 0.7
LRMDA-205ENST00000488759 EIF4G3O43432 1585 aaKnown RBP19.4■□□□□ 0.7
LRMDA-205ENST00000488759 ABCC8Q09428 1581 aa19.4■□□□□ 0.7
LRMDA-205ENST00000488759 OSCARQ8IYS5 282 aa19.38■□□□□ 0.69
LRMDA-205ENST00000488759 ZNF608Q9ULD9 1512 aaPredicted RBP19.38■□□□□ 0.69
LRMDA-205ENST00000488759 CHD1O14646 1710 aa19.31■□□□□ 0.68
LRMDA-205ENST00000488759 SUPT5HO00267 1087 aaKnown RBP19.3■□□□□ 0.68
LRMDA-205ENST00000488759 TARBP1Q13395 1621 aaKnown RBP19.26■□□□□ 0.67
LRMDA-205ENST00000488759 POLA1P09884 1462 aaPredicted RBP19.25■□□□□ 0.67
LRMDA-205ENST00000488759 FBLN2P98095 1184 aa19.24■□□□□ 0.67
LRMDA-205ENST00000488759 RIMBP3CA6NJZ7 1639 aa19.24■□□□□ 0.67
LRMDA-205ENST00000488759 RIMBP3BA6NNM3 1639 aa19.24■□□□□ 0.67
LRMDA-205ENST00000488759 RIMBP3Q9UFD9 1639 aa19.24■□□□□ 0.67
LRMDA-205ENST00000488759 AQRO60306 1485 aaKnown RBP eCLIP19.22■□□□□ 0.67
LRMDA-205ENST00000488759 RAD54L2Q9Y4B4 1467 aa19.2■□□□□ 0.66
LRMDA-205ENST00000488759 FGD5Q6ZNL6 1462 aa19.19■□□□□ 0.66
LRMDA-205ENST00000488759 SOGA1O94964 1423 aa19.17■□□□□ 0.66
LRMDA-205ENST00000488759 CUX1P39880 1505 aa19.15■□□□□ 0.66
LRMDA-205ENST00000488759 ARHGEF11O15085 1522 aa19.13■□□□□ 0.65
LRMDA-205ENST00000488759 PBRM1Q86U86 1689 aa19.12■□□□□ 0.65
LRMDA-205ENST00000488759 TDRD9Q8NDG6 1382 aaKnown RBP19.12■□□□□ 0.65
LRMDA-205ENST00000488759 SNAPC4Q5SXM2 1469 aa19.1■□□□□ 0.65
LRMDA-205ENST00000488759 WDR97A6NE52 1622 aa19.1■□□□□ 0.65
LRMDA-205ENST00000488759 SYNJ1O43426 1573 aa19.02■□□□□ 0.64
LRMDA-205ENST00000488759 CHMP7Q8WUX9 453 aaPredicted RBP19.01■□□□□ 0.63
LRMDA-205ENST00000488759 GRIN2BQ13224 1484 aa19.01■□□□□ 0.63
LRMDA-205ENST00000488759 MAGI1Q96QZ7 1491 aaPredicted RBP19■□□□□ 0.63
LRMDA-205ENST00000488759 CYB5RLQ6IPT4 315 aa18.98■□□□□ 0.63
LRMDA-205ENST00000488759 GAPVD1Q14C86 1478 aa18.97■□□□□ 0.63
LRMDA-205ENST00000488759 ABCA5Q8WWZ7 1642 aa18.94■□□□□ 0.62
LRMDA-205ENST00000488759 SYNJ2O15056 1496 aa18.94■□□□□ 0.62
LRMDA-205ENST00000488759 BIVM-ERCC5R4GMW8 1640 aa18.92■□□□□ 0.62
LRMDA-205ENST00000488759 ARAP1Q96P48 1450 aa18.91■□□□□ 0.62
LRMDA-205ENST00000488759 ABCA10Q8WWZ4 1543 aa18.9■□□□□ 0.62
LRMDA-205ENST00000488759 WRNQ14191 1432 aaPredicted RBP eCLIP18.9■□□□□ 0.62
LRMDA-205ENST00000488759 CLASP1Q7Z460 1538 aa18.9■□□□□ 0.62
LRMDA-205ENST00000488759 TOP2BQ02880 1626 aa18.89■□□□□ 0.62
LRMDA-205ENST00000488759 TRHP20396 242 aaPredicted RBP18.88■□□□□ 0.61
LRMDA-205ENST00000488759 ADAMTS12P58397 1594 aa18.84■□□□□ 0.61
LRMDA-205ENST00000488759 GRIN2AQ12879 1464 aa18.77■□□□□ 0.6
LRMDA-205ENST00000488759 CEP170Q5SW79 1584 aa18.72■□□□□ 0.59
LRMDA-205ENST00000488759 ERICH3Q5RHP9 1530 aa18.7■□□□□ 0.58
LRMDA-205ENST00000488759 FHAD1B1AJZ9 1412 aa18.69■□□□□ 0.58
LRMDA-205ENST00000488759 ERCC6L2Q5T890 1561 aa18.64■□□□□ 0.58
LRMDA-205ENST00000488759 NUP160Q12769 1436 aa18.61■□□□□ 0.57
LRMDA-205ENST00000488759 SHROOM2Q13796 1616 aa18.6■□□□□ 0.57
LRMDA-205ENST00000488759 RUSC2Q8N2Y8 1516 aa18.57■□□□□ 0.56
LRMDA-205ENST00000488759 CUL7Q14999 1698 aa18.57■□□□□ 0.56
LRMDA-205ENST00000488759 KIF27Q86VH2 1401 aa18.53■□□□□ 0.56
LRMDA-205ENST00000488759 PRG4Q92954 1404 aaPredicted RBP18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms