RNA–Protein interactions for RNA: ENST00000488594.5

GGPS1-206, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 1,396 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-206ENST00000488594 CAMSAP2Q08AD1 1489 aa30.47■■■□□ 2.47
GGPS1-206ENST00000488594 SPATA31D1Q6ZQQ2 1576 aa30.45■■■□□ 2.47
GGPS1-206ENST00000488594 KDM5DQ9BY66 1539 aa30.44■■■□□ 2.46
GGPS1-206ENST00000488594 TNRQ92752 1358 aa30.44■■■□□ 2.46
GGPS1-206ENST00000488594 DNMT1P26358 1616 aaKnown RBP30.43■■■□□ 2.46
GGPS1-206ENST00000488594 UBAP1LF5GYI3 381 aa30.43■■■□□ 2.46
GGPS1-206ENST00000488594 PZPP20742 1482 aa30.43■■■□□ 2.46
GGPS1-206ENST00000488594 WASHC2CQ9Y4E1 1318 aa30.42■■■□□ 2.46
GGPS1-206ENST00000488594 SOCS7O14512 581 aa30.41■■■□□ 2.46
GGPS1-206ENST00000488594 FBXO31Q5XUX0 539 aaPredicted RBP30.4■■■□□ 2.46
GGPS1-206ENST00000488594 TSPY4P0CV99 314 aa30.39■■■□□ 2.45
GGPS1-206ENST00000488594 TSPY10P0CW01 314 aa30.39■■■□□ 2.45
GGPS1-206ENST00000488594 ARHGEF5Q12774 1597 aa30.37■■■□□ 2.45
GGPS1-206ENST00000488594 NLRP1Q9C000 1473 aa30.32■■■□□ 2.44
GGPS1-206ENST00000488594 MIA2Q96PC5 1412 aa30.32■■■□□ 2.44
GGPS1-206ENST00000488594 THEMISQ8N1K5 641 aaPredicted RBP30.31■■■□□ 2.44
GGPS1-206ENST00000488594 ANKLE2Q86XL3 938 aa30.3■■■□□ 2.44
GGPS1-206ENST00000488594 CPS1P31327 1500 aa30.3■■■□□ 2.44
GGPS1-206ENST00000488594 POLR1AO95602 1720 aaPredicted RBP30.29■■■□□ 2.44
GGPS1-206ENST00000488594 NEURL4Q96JN8 1562 aa30.29■■■□□ 2.44
GGPS1-206ENST00000488594 LRRC9Q6ZRR7 1453 aa30.28■■■□□ 2.44
GGPS1-206ENST00000488594 VPS8Q8N3P4 1428 aa30.27■■■□□ 2.44
GGPS1-206ENST00000488594 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.27■■■□□ 2.44
GGPS1-206ENST00000488594 SHANK2Q9UPX8 1470 aa30.26■■■□□ 2.43
GGPS1-206ENST00000488594 UGGT1Q9NYU2 1555 aa30.24■■■□□ 2.43
GGPS1-206ENST00000488594 MAST1Q9Y2H9 1570 aa30.23■■■□□ 2.43
GGPS1-206ENST00000488594 TOM1O60784 492 aa30.22■■■□□ 2.43
GGPS1-206ENST00000488594 RNF17Q9BXT8 1623 aaKnown RBP30.22■■■□□ 2.43
GGPS1-206ENST00000488594 MED14O60244 1454 aa30.21■■■□□ 2.43
GGPS1-206ENST00000488594 NPHP4O75161 1426 aaPredicted RBP30.19■■■□□ 2.42
GGPS1-206ENST00000488594 ABCC3O15438 1527 aa30.19■■■□□ 2.42
GGPS1-206ENST00000488594 MAP3K1Q13233 1512 aa30.19■■■□□ 2.42
GGPS1-206ENST00000488594 DEPDC5O75140 1603 aa30.19■■■□□ 2.42
GGPS1-206ENST00000488594 ZC3H13Q5T200 1668 aaKnown RBP30.18■■■□□ 2.42
GGPS1-206ENST00000488594 EIF2AK4Q9P2K8 1649 aaKnown RBP30.16■■■□□ 2.42
GGPS1-206ENST00000488594 SCAF1Q9H7N4 1312 aaKnown RBP30.16■■■□□ 2.42
GGPS1-206ENST00000488594 VWDEQ8N2E2 1590 aa30.15■■■□□ 2.42
GGPS1-206ENST00000488594 MYOM3Q5VTT5 1437 aa30.14■■■□□ 2.42
GGPS1-206ENST00000488594 PIP4K2BP78356 416 aa30.14■■■□□ 2.41
GGPS1-206ENST00000488594 KANK4Q5T7N3 995 aaPredicted RBP30.13■■■□□ 2.41
GGPS1-206ENST00000488594 HSPA1LP34931 641 aa30.12■■■□□ 2.41
GGPS1-206ENST00000488594 ERVK-7P63135 1459 aa30.11■■■□□ 2.41
GGPS1-206ENST00000488594 LOC105371045A0A1W2PR82 267 aa30.08■■■□□ 2.41
GGPS1-206ENST00000488594 DUOX2Q9NRD8 1548 aa30.08■■■□□ 2.41
GGPS1-206ENST00000488594 IQGAP1P46940 1657 aa30.08■■■□□ 2.41
GGPS1-206ENST00000488594 MROH1Q8NDA8 1641 aa30.07■■■□□ 2.4
GGPS1-206ENST00000488594 KIF15Q9NS87 1388 aa30■■■□□ 2.39
GGPS1-206ENST00000488594 ARHGAP31Q2M1Z3 1444 aa29.99■■■□□ 2.39
GGPS1-206ENST00000488594 ERBINQ96RT1 1412 aa29.99■■■□□ 2.39
GGPS1-206ENST00000488594 MED1Q15648 1581 aaPredicted RBP29.98■■■□□ 2.39
GGPS1-206ENST00000488594 PRDM15P57071 1507 aaPredicted RBP29.97■■■□□ 2.39
GGPS1-206ENST00000488594 CEP152O94986 1710 aa29.97■■■□□ 2.39
GGPS1-206ENST00000488594 SCAF11Q99590 1463 aaKnown RBP29.97■■■□□ 2.39
GGPS1-206ENST00000488594 LRRC7Q96NW7 1537 aa29.96■■■□□ 2.39
GGPS1-206ENST00000488594 SYNMO15061 1565 aa29.96■■■□□ 2.39
GGPS1-206ENST00000488594 ALKQ9UM73 1620 aa29.95■■■□□ 2.39
GGPS1-206ENST00000488594 ABCC5O15440 1437 aa29.95■■■□□ 2.39
GGPS1-206ENST00000488594 UBR1Q8IWV7 1749 aa29.95■■■□□ 2.39
GGPS1-206ENST00000488594 APLP2Q06481 763 aa29.93■■■□□ 2.38
GGPS1-206ENST00000488594 RRP7BPQ9NSQ0 103 aa29.93■■■□□ 2.38
GGPS1-206ENST00000488594 SLIT1O75093 1534 aa29.93■■■□□ 2.38
GGPS1-206ENST00000488594 ARHGAP23Q9P227 1491 aa29.92■■■□□ 2.38
GGPS1-206ENST00000488594 TXNDC2Q86VQ3 553 aa29.91■■■□□ 2.38
GGPS1-206ENST00000488594 STRCP1A6NGW2 1772 aa29.9■■■□□ 2.38
GGPS1-206ENST00000488594 EID1Q9Y6B2 187 aa29.9■■■□□ 2.38
GGPS1-206ENST00000488594 CROCC2H7BZ55 1655 aa29.89■■■□□ 2.38
GGPS1-206ENST00000488594 KANK1Q14678 1352 aa29.89■■■□□ 2.38
GGPS1-206ENST00000488594 PTPN23Q9H3S7 1636 aa29.89■■■□□ 2.38
GGPS1-206ENST00000488594 LTKP29376 864 aa29.89■■■□□ 2.37
GGPS1-206ENST00000488594 DAPK1P53355 1430 aa29.88■■■□□ 2.37
GGPS1-206ENST00000488594 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.87■■■□□ 2.37
GGPS1-206ENST00000488594 CFAP65Q6ZU64 1925 aaKnown RBP29.85■■■□□ 2.37
GGPS1-206ENST00000488594 PHF23Q9BUL5 403 aaPredicted RBP29.83■■■□□ 2.37
GGPS1-206ENST00000488594 ANKRD30AQ9BXX3 1397 aa29.83■■■□□ 2.37
GGPS1-206ENST00000488594 TMEM2Q9UHN6 1383 aa29.83■■■□□ 2.37
GGPS1-206ENST00000488594 FGD6Q6ZV73 1430 aa29.83■■■□□ 2.37
GGPS1-206ENST00000488594 STAG3Q9UJ98 1225 aa29.82■■■□□ 2.36
GGPS1-206ENST00000488594 LMTK2Q8IWU2 1503 aa29.79■■■□□ 2.36
GGPS1-206ENST00000488594 PIK3C2BO00750 1634 aa29.78■■■□□ 2.36
GGPS1-206ENST00000488594 KDM5AP29375 1690 aaKnown RBP29.76■■■□□ 2.35
GGPS1-206ENST00000488594 EFCAB6Q5THR3 1501 aa29.75■■■□□ 2.35
GGPS1-206ENST00000488594 IDI1Q13907 227 aa29.74■■■□□ 2.35
GGPS1-206ENST00000488594 SENP3Q9H4L4 574 aaPredicted RBP29.74■■■□□ 2.35
GGPS1-206ENST00000488594 CHIC2Q9UKJ5 165 aa29.74■■■□□ 2.35
GGPS1-206ENST00000488594 NOS1P29475 1434 aa29.69■■■□□ 2.34
GGPS1-206ENST00000488594 KCNA6P17658 529 aa29.67■■■□□ 2.34
GGPS1-206ENST00000488594 SLC52A1Q9NWF4 448 aa29.67■■■□□ 2.34
GGPS1-206ENST00000488594 ADGRL2O95490 1459 aa29.67■■■□□ 2.34
GGPS1-206ENST00000488594 FAM135BQ49AJ0 1406 aa29.65■■■□□ 2.34
GGPS1-206ENST00000488594 TMEM94Q12767 1356 aa29.65■■■□□ 2.34
GGPS1-206ENST00000488594 XIRP1Q702N8 1843 aaKnown RBP29.64■■■□□ 2.34
GGPS1-206ENST00000488594 ADGRB3O60242 1522 aa29.63■■■□□ 2.33
GGPS1-206ENST00000488594 TET3O43151 1660 aa29.62■■■□□ 2.33
GGPS1-206ENST00000488594 SLC26A8Q96RN1 970 aa29.62■■■□□ 2.33
GGPS1-206ENST00000488594 RPRD2Q5VT52 1461 aaKnown RBP29.62■■■□□ 2.33
GGPS1-206ENST00000488594 PROSER2Q86WR7 435 aaPredicted RBP29.59■■■□□ 2.33
GGPS1-206ENST00000488594 ANKRD50Q9ULJ7 1429 aa29.59■■■□□ 2.33
GGPS1-206ENST00000488594 FAM50AQ14320 339 aaKnown RBP29.57■■■□□ 2.32
GGPS1-206ENST00000488594 NKTRP30414 1462 aaKnown RBP29.57■■■□□ 2.32
GGPS1-206ENST00000488594 BCANQ96GW7 911 aa29.54■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms