RNA–Protein interactions for RNA: ENST00000487091.1

CLIP2-206, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best)

Gene CLIP2, Length 989 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-206ENST00000487091 PTPRTO14522 1441 aa29.76■■■□□ 2.35
CLIP2-206ENST00000487091 NCOA1Q15788 1441 aa29.76■■■□□ 2.35
CLIP2-206ENST00000487091 ABCC5O15440 1437 aa29.75■■■□□ 2.35
CLIP2-206ENST00000487091 MYO3AQ8NEV4 1616 aa29.74■■■□□ 2.35
CLIP2-206ENST00000487091 TCOF1Q13428 1488 aaKnown RBP29.74■■■□□ 2.35
CLIP2-206ENST00000487091 SHANK2Q9UPX8 1470 aa29.74■■■□□ 2.35
CLIP2-206ENST00000487091 ZNF142P52746 1687 aaPredicted RBP29.73■■■□□ 2.35
CLIP2-206ENST00000487091 EIF2AK4Q9P2K8 1649 aaKnown RBP29.73■■■□□ 2.35
CLIP2-206ENST00000487091 CAMSAP1Q5T5Y3 1602 aa29.72■■■□□ 2.35
CLIP2-206ENST00000487091 RNF17Q9BXT8 1623 aaKnown RBP29.72■■■□□ 2.35
CLIP2-206ENST00000487091 PZPP20742 1482 aa29.72■■■□□ 2.35
CLIP2-206ENST00000487091 DUOX2Q9NRD8 1548 aa29.71■■■□□ 2.35
CLIP2-206ENST00000487091 CROCC2H7BZ55 1655 aa29.7■■■□□ 2.35
CLIP2-206ENST00000487091 CEP170BQ9Y4F5 1589 aaPredicted RBP29.7■■■□□ 2.35
CLIP2-206ENST00000487091 CERKQ8TCT0 537 aa29.7■■■□□ 2.35
CLIP2-206ENST00000487091 DAPK1P53355 1430 aa29.69■■■□□ 2.34
CLIP2-206ENST00000487091 DNMT1P26358 1616 aaKnown RBP29.68■■■□□ 2.34
CLIP2-206ENST00000487091 FBXO31Q5XUX0 539 aaPredicted RBP29.68■■■□□ 2.34
CLIP2-206ENST00000487091 TNRQ92752 1358 aa29.66■■■□□ 2.34
CLIP2-206ENST00000487091 KIF15Q9NS87 1388 aa29.66■■■□□ 2.34
CLIP2-206ENST00000487091 A2ML1A8K2U0 1454 aa29.66■■■□□ 2.34
CLIP2-206ENST00000487091 PLA2R1Q13018 1463 aa29.66■■■□□ 2.34
CLIP2-206ENST00000487091 ZC3H13Q5T200 1668 aaKnown RBP29.63■■■□□ 2.33
CLIP2-206ENST00000487091 PKD2Q13563 968 aa29.63■■■□□ 2.33
CLIP2-206ENST00000487091 RRP7BPQ9NSQ0 103 aa29.63■■■□□ 2.33
CLIP2-206ENST00000487091 ABCC3O15438 1527 aa29.62■■■□□ 2.33
CLIP2-206ENST00000487091 ERBINQ96RT1 1412 aa29.62■■■□□ 2.33
CLIP2-206ENST00000487091 MROH1Q8NDA8 1641 aa29.61■■■□□ 2.33
CLIP2-206ENST00000487091 NCKAP5LQ9HCH0 1330 aa29.61■■■□□ 2.33
CLIP2-206ENST00000487091 ANKRD30AQ9BXX3 1397 aa29.58■■■□□ 2.33
CLIP2-206ENST00000487091 NLRP1Q9C000 1473 aa29.55■■■□□ 2.32
CLIP2-206ENST00000487091 CHIC2Q9UKJ5 165 aa29.55■■■□□ 2.32
CLIP2-206ENST00000487091 FAM50AQ14320 339 aaKnown RBP29.53■■■□□ 2.32
CLIP2-206ENST00000487091 PRDM15P57071 1507 aaPredicted RBP29.52■■■□□ 2.32
CLIP2-206ENST00000487091 SPATA31D1Q6ZQQ2 1576 aa29.52■■■□□ 2.32
CLIP2-206ENST00000487091 CEP152O94986 1710 aa29.51■■■□□ 2.32
CLIP2-206ENST00000487091 ADGRL2O95490 1459 aa29.5■■■□□ 2.31
CLIP2-206ENST00000487091 LTBP4Q8N2S1 1624 aa29.49■■■□□ 2.31
CLIP2-206ENST00000487091 THEMISQ8N1K5 641 aaPredicted RBP29.49■■■□□ 2.31
CLIP2-206ENST00000487091 ERVK-7P63135 1459 aa29.48■■■□□ 2.31
CLIP2-206ENST00000487091 DEPDC5O75140 1603 aa29.48■■■□□ 2.31
CLIP2-206ENST00000487091 ARHGAP31Q2M1Z3 1444 aa29.47■■■□□ 2.31
CLIP2-206ENST00000487091 UGGT1Q9NYU2 1555 aa29.46■■■□□ 2.31
CLIP2-206ENST00000487091 KANK1Q14678 1352 aa29.45■■■□□ 2.31
CLIP2-206ENST00000487091 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.45■■■□□ 2.312e-6■■■□□ 16.4
CLIP2-206ENST00000487091 CFAP65Q6ZU64 1925 aaKnown RBP29.44■■■□□ 2.3
CLIP2-206ENST00000487091 ANKLE2Q86XL3 938 aa29.43■■■□□ 2.3
CLIP2-206ENST00000487091 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.42■■■□□ 2.3
CLIP2-206ENST00000487091 POLR1AO95602 1720 aaPredicted RBP29.42■■■□□ 2.3
CLIP2-206ENST00000487091 IQSEC2Q5JU85 1478 aa29.41■■■□□ 2.3
CLIP2-206ENST00000487091 ZNF335Q9H4Z2 1342 aaPredicted RBP29.4■■■□□ 2.3
CLIP2-206ENST00000487091 LMTK2Q8IWU2 1503 aa29.38■■■□□ 2.29
CLIP2-206ENST00000487091 VWDEQ8N2E2 1590 aa29.38■■■□□ 2.29
CLIP2-206ENST00000487091 NEURL4Q96JN8 1562 aa29.37■■■□□ 2.29
CLIP2-206ENST00000487091 ANKRD50Q9ULJ7 1429 aa29.36■■■□□ 2.29
CLIP2-206ENST00000487091 MED14O60244 1454 aa29.33■■■□□ 2.29
CLIP2-206ENST00000487091 ROCK1Q13464 1354 aa29.3■■■□□ 2.28
CLIP2-206ENST00000487091 UBR1Q8IWV7 1749 aa29.29■■■□□ 2.28
CLIP2-206ENST00000487091 PPARGC1BQ86YN6 1023 aaKnown RBP29.29■■■□□ 2.28
CLIP2-206ENST00000487091 NPHP4O75161 1426 aaPredicted RBP29.28■■■□□ 2.28
CLIP2-206ENST00000487091 EFCAB6Q5THR3 1501 aa29.25■■■□□ 2.27
CLIP2-206ENST00000487091 NOS1P29475 1434 aa29.22■■■□□ 2.27
CLIP2-206ENST00000487091 ARHGAP23Q9P227 1491 aa29.22■■■□□ 2.27
CLIP2-206ENST00000487091 IQGAP1P46940 1657 aa29.21■■■□□ 2.27
CLIP2-206ENST00000487091 SLIT1O75093 1534 aa29.21■■■□□ 2.27
CLIP2-206ENST00000487091 CPS1P31327 1500 aa29.2■■■□□ 2.27
CLIP2-206ENST00000487091 IDI1Q13907 227 aa29.2■■■□□ 2.26
CLIP2-206ENST00000487091 RPRD2Q5VT52 1461 aaKnown RBP29.2■■■□□ 2.26
CLIP2-206ENST00000487091 PIK3C2BO00750 1634 aa29.2■■■□□ 2.26
CLIP2-206ENST00000487091 KDM5AP29375 1690 aaKnown RBP29.18■■■□□ 2.26
CLIP2-206ENST00000487091 SCAF11Q99590 1463 aaKnown RBP29.18■■■□□ 2.26
CLIP2-206ENST00000487091 STAG3Q9UJ98 1225 aa29.18■■■□□ 2.26
CLIP2-206ENST00000487091 UNC13BO14795 1591 aa29.18■■■□□ 2.26
CLIP2-206ENST00000487091 SYNMO15061 1565 aa29.18■■■□□ 2.26
CLIP2-206ENST00000487091 ITGAEP38570 1179 aa29.17■■■□□ 2.26
CLIP2-206ENST00000487091 TXNDC2Q86VQ3 553 aa29.17■■■□□ 2.26
CLIP2-206ENST00000487091 LTKP29376 864 aa29.16■■■□□ 2.26
CLIP2-206ENST00000487091 SLC52A1Q9NWF4 448 aa29.16■■■□□ 2.26
CLIP2-206ENST00000487091 EID1Q9Y6B2 187 aa29.16■■■□□ 2.26
CLIP2-206ENST00000487091 TET3O43151 1660 aa29.15■■■□□ 2.26
CLIP2-206ENST00000487091 TMEM2Q9UHN6 1383 aa29.14■■■□□ 2.26
CLIP2-206ENST00000487091 UBAP1LF5GYI3 381 aa29.13■■■□□ 2.25
CLIP2-206ENST00000487091 RRBP1Q9P2E9 1410 aaKnown RBP29.12■■■□□ 2.25
CLIP2-206ENST00000487091 GCC2Q8IWJ2 1684 aa29.11■■■□□ 2.25
CLIP2-206ENST00000487091 IQGAP3Q86VI3 1631 aa29.06■■■□□ 2.24
CLIP2-206ENST00000487091 ADGRB3O60242 1522 aa29.06■■■□□ 2.24
CLIP2-206ENST00000487091 NUP155O75694 1391 aa29.04■■■□□ 2.24
CLIP2-206ENST00000487091 TOM1O60784 492 aa29.02■■■□□ 2.24
CLIP2-206ENST00000487091 STRCP1A6NGW2 1772 aa29.02■■■□□ 2.24
CLIP2-206ENST00000487091 E9PCH4 1651 aa29.02■■■□□ 2.24
CLIP2-206ENST00000487091 LRRC7Q96NW7 1537 aa28.98■■■□□ 2.23
CLIP2-206ENST00000487091 TMEM131LA2VDJ0 1609 aa28.94■■■□□ 2.22
CLIP2-206ENST00000487091 HDGFP51858 240 aaKnown RBP28.94■■■□□ 2.22
CLIP2-206ENST00000487091 MYO5BQ9ULV0 1848 aa28.92■■■□□ 2.22
CLIP2-206ENST00000487091 ZFYVE9O95405 1425 aa28.92■■■□□ 2.22
CLIP2-206ENST00000487091 NAIPQ13075 1403 aa28.92■■■□□ 2.22
CLIP2-206ENST00000487091 RIMS2Q9UQ26 1411 aa28.89■■■□□ 2.22
CLIP2-206ENST00000487091 PIP4K2BP78356 416 aa28.89■■■□□ 2.22
CLIP2-206ENST00000487091 SLC26A8Q96RN1 970 aa28.89■■■□□ 2.22
CLIP2-206ENST00000487091 CHGAP10645 457 aaKnown RBP28.88■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms