RNA–Protein interactions for RNA: ENST00000486066.5

CHRD-216, Transcript of chordin, humanhuman

TSL 4

Gene CHRD, Length 546 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-216ENST00000486066 DHX29Q7Z478 1369 aaKnown RBP31.4■■■□□ 2.62
CHRD-216ENST00000486066 CEP162Q5TB80 1403 aa31.39■■■□□ 2.62
CHRD-216ENST00000486066 PZPP20742 1482 aa31.35■■■□□ 2.61
CHRD-216ENST00000486066 KDM5DQ9BY66 1539 aa31.33■■■□□ 2.61
CHRD-216ENST00000486066 CPS1P31327 1500 aa31.32■■■□□ 2.6
CHRD-216ENST00000486066 TNRQ92752 1358 aa31.3■■■□□ 2.6
CHRD-216ENST00000486066 CCDC141Q6ZP82 1450 aa31.29■■■□□ 2.6
CHRD-216ENST00000486066 VWDEQ8N2E2 1590 aa31.28■■■□□ 2.6
CHRD-216ENST00000486066 SHANK2Q9UPX8 1470 aa31.27■■■□□ 2.6
CHRD-216ENST00000486066 FBXO31Q5XUX0 539 aaPredicted RBP31.27■■■□□ 2.6
CHRD-216ENST00000486066 ALKQ9UM73 1620 aa31.25■■■□□ 2.59
CHRD-216ENST00000486066 CAMSAP2Q08AD1 1489 aa31.25■■■□□ 2.59
CHRD-216ENST00000486066 MED14O60244 1454 aa31.24■■■□□ 2.59
CHRD-216ENST00000486066 DEPDC5O75140 1603 aa31.24■■■□□ 2.59
CHRD-216ENST00000486066 MED1Q15648 1581 aaPredicted RBP31.22■■■□□ 2.59
CHRD-216ENST00000486066 ARHGEF5Q12774 1597 aa31.22■■■□□ 2.59
CHRD-216ENST00000486066 NCOA2Q15596 1464 aa31.21■■■□□ 2.59
CHRD-216ENST00000486066 NLRP1Q9C000 1473 aa31.21■■■□□ 2.59
CHRD-216ENST00000486066 KIF3BO15066 747 aa31.21■■■□□ 2.59
CHRD-216ENST00000486066 MIA2Q96PC5 1412 aa31.2■■■□□ 2.59
CHRD-216ENST00000486066 HSPA1LP34931 641 aa31.18■■■□□ 2.58
CHRD-216ENST00000486066 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.17■■■□□ 2.58
CHRD-216ENST00000486066 RNF17Q9BXT8 1623 aaKnown RBP31.16■■■□□ 2.58
CHRD-216ENST00000486066 RSPH4AQ5TD94 716 aa31.16■■■□□ 2.58
CHRD-216ENST00000486066 UGGT1Q9NYU2 1555 aa31.16■■■□□ 2.58
CHRD-216ENST00000486066 STRCP1A6NGW2 1772 aa31.12■■■□□ 2.57
CHRD-216ENST00000486066 WASHC2CQ9Y4E1 1318 aa31.12■■■□□ 2.57
CHRD-216ENST00000486066 TOM1O60784 492 aa31.11■■■□□ 2.57
CHRD-216ENST00000486066 NPHP4O75161 1426 aaPredicted RBP31.11■■■□□ 2.57
CHRD-216ENST00000486066 IQGAP1P46940 1657 aa31.11■■■□□ 2.57
CHRD-216ENST00000486066 ANKLE2Q86XL3 938 aa31.11■■■□□ 2.57
CHRD-216ENST00000486066 ZC3H13Q5T200 1668 aaKnown RBP31.1■■■□□ 2.57
CHRD-216ENST00000486066 THEMISQ8N1K5 641 aaPredicted RBP31.1■■■□□ 2.57
CHRD-216ENST00000486066 MAST1Q9Y2H9 1570 aa31.09■■■□□ 2.57
CHRD-216ENST00000486066 ABCC3O15438 1527 aa31.09■■■□□ 2.57
CHRD-216ENST00000486066 MROH1Q8NDA8 1641 aa31.07■■■□□ 2.56
CHRD-216ENST00000486066 PIP4K2BP78356 416 aa31.06■■■□□ 2.56
CHRD-216ENST00000486066 EIF2AK4Q9P2K8 1649 aaKnown RBP31.05■■■□□ 2.56
CHRD-216ENST00000486066 LRRC7Q96NW7 1537 aa31.02■■■□□ 2.56
CHRD-216ENST00000486066 SYNMO15061 1565 aa31.01■■■□□ 2.56
CHRD-216ENST00000486066 ERVK-7P63135 1459 aa31.01■■■□□ 2.55
CHRD-216ENST00000486066 SCAF1Q9H7N4 1312 aaKnown RBP30.99■■■□□ 2.55
CHRD-216ENST00000486066 UBR1Q8IWV7 1749 aa30.98■■■□□ 2.55
CHRD-216ENST00000486066 LRRC9Q6ZRR7 1453 aa30.95■■■□□ 2.55
CHRD-216ENST00000486066 TSPY4P0CV99 314 aa30.95■■■□□ 2.55
CHRD-216ENST00000486066 TSPY10P0CW01 314 aa30.95■■■□□ 2.55
CHRD-216ENST00000486066 CEP152O94986 1710 aa30.94■■■□□ 2.54
CHRD-216ENST00000486066 ARHGAP23Q9P227 1491 aa30.91■■■□□ 2.54
CHRD-216ENST00000486066 SLIT1O75093 1534 aa30.89■■■□□ 2.54
CHRD-216ENST00000486066 XIRP1Q702N8 1843 aaKnown RBP30.89■■■□□ 2.53
CHRD-216ENST00000486066 CFAP65Q6ZU64 1925 aaKnown RBP30.87■■■□□ 2.53
CHRD-216ENST00000486066 SCAF11Q99590 1463 aaKnown RBP30.86■■■□□ 2.53
CHRD-216ENST00000486066 PRDM15P57071 1507 aaPredicted RBP30.85■■■□□ 2.53
CHRD-216ENST00000486066 MAP3K1Q13233 1512 aa30.84■■■□□ 2.53
CHRD-216ENST00000486066 DUOX2Q9NRD8 1548 aa30.84■■■□□ 2.53
CHRD-216ENST00000486066 ARHGAP31Q2M1Z3 1444 aa30.84■■■□□ 2.53
CHRD-216ENST00000486066 VPS8Q8N3P4 1428 aa30.84■■■□□ 2.53
CHRD-216ENST00000486066 MYOM3Q5VTT5 1437 aa30.81■■■□□ 2.52
CHRD-216ENST00000486066 LTKP29376 864 aa30.79■■■□□ 2.52
CHRD-216ENST00000486066 CROCC2H7BZ55 1655 aa30.77■■■□□ 2.52
CHRD-216ENST00000486066 KANK4Q5T7N3 995 aaPredicted RBP30.76■■■□□ 2.51
CHRD-216ENST00000486066 KDM5AP29375 1690 aaKnown RBP30.74■■■□□ 2.51
CHRD-216ENST00000486066 PIK3C2BO00750 1634 aa30.73■■■□□ 2.51
CHRD-216ENST00000486066 PHF23Q9BUL5 403 aaPredicted RBP30.73■■■□□ 2.51
CHRD-216ENST00000486066 ERBINQ96RT1 1412 aa30.73■■■□□ 2.51
CHRD-216ENST00000486066 RGS17Q9UGC6 210 aaPredicted RBP30.71■■■□□ 2.51
CHRD-216ENST00000486066 KIF15Q9NS87 1388 aa30.69■■■□□ 2.5
CHRD-216ENST00000486066 ABCC5O15440 1437 aa30.69■■■□□ 2.5
CHRD-216ENST00000486066 TXNDC2Q86VQ3 553 aa30.68■■■□□ 2.5
CHRD-216ENST00000486066 TMEM2Q9UHN6 1383 aa30.66■■■□□ 2.5
CHRD-216ENST00000486066 LMTK2Q8IWU2 1503 aa30.66■■■□□ 2.5
CHRD-216ENST00000486066 FAM135BQ49AJ0 1406 aa30.65■■■□□ 2.5
CHRD-216ENST00000486066 TET3O43151 1660 aa30.65■■■□□ 2.5
CHRD-216ENST00000486066 PTPN23Q9H3S7 1636 aa30.62■■■□□ 2.49
CHRD-216ENST00000486066 EFCAB6Q5THR3 1501 aa30.6■■■□□ 2.49
CHRD-216ENST00000486066 SENP3Q9H4L4 574 aaPredicted RBP30.6■■■□□ 2.49
CHRD-216ENST00000486066 DAPK1P53355 1430 aa30.57■■■□□ 2.48
CHRD-216ENST00000486066 EID1Q9Y6B2 187 aa30.57■■■□□ 2.48
CHRD-216ENST00000486066 NWD1Q149M9 1564 aa30.57■■■□□ 2.48
CHRD-216ENST00000486066 TMEM94Q12767 1356 aa30.55■■■□□ 2.48
CHRD-216ENST00000486066 ROBO1Q9Y6N7 1651 aa30.55■■■□□ 2.48
CHRD-216ENST00000486066 NOS1P29475 1434 aa30.55■■■□□ 2.48
CHRD-216ENST00000486066 RRP7BPQ9NSQ0 103 aa30.54■■■□□ 2.48
CHRD-216ENST00000486066 IDI1Q13907 227 aa30.52■■■□□ 2.48
CHRD-216ENST00000486066 KCNA6P17658 529 aa30.51■■■□□ 2.47
CHRD-216ENST00000486066 ADGRB3O60242 1522 aa30.51■■■□□ 2.47
CHRD-216ENST00000486066 LOC105371045A0A1W2PR82 267 aa30.49■■■□□ 2.47
CHRD-216ENST00000486066 NKTRP30414 1462 aaKnown RBP30.49■■■□□ 2.47
CHRD-216ENST00000486066 KANK1Q14678 1352 aa30.48■■■□□ 2.47
CHRD-216ENST00000486066 FGD6Q6ZV73 1430 aa30.47■■■□□ 2.47
CHRD-216ENST00000486066 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.46■■■□□ 2.474e-7■■□□□ 12.5
CHRD-216ENST00000486066 POTEAQ6S8J7 498 aa30.44■■■□□ 2.46
CHRD-216ENST00000486066 SLC26A8Q96RN1 970 aa30.41■■■□□ 2.46
CHRD-216ENST00000486066 ADGRL2O95490 1459 aa30.41■■■□□ 2.46
CHRD-216ENST00000486066 ANKRD30AQ9BXX3 1397 aa30.41■■■□□ 2.46
CHRD-216ENST00000486066 ZFYVE9O95405 1425 aa30.4■■■□□ 2.46
CHRD-216ENST00000486066 CHD2O14647 1828 aaKnown RBP30.4■■■□□ 2.46
CHRD-216ENST00000486066 STAG3Q9UJ98 1225 aa30.39■■■□□ 2.46
CHRD-216ENST00000486066 MYO5BQ9ULV0 1848 aa30.38■■■□□ 2.45
CHRD-216ENST00000486066 RPRD2Q5VT52 1461 aaKnown RBP30.37■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms