RNA–Protein interactions for RNA: ENST00000480024.1

FN1-220, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-220ENST00000480024 A2ML1A8K2U0 1454 aa10.55□□□□□ -0.72
FN1-220ENST00000480024 PZPP20742 1482 aa10.55□□□□□ -0.72
FN1-220ENST00000480024 LTBP4Q8N2S1 1624 aa10.55□□□□□ -0.72
FN1-220ENST00000480024 RNF17Q9BXT8 1623 aaKnown RBP10.55□□□□□ -0.72
FN1-220ENST00000480024 CROCC2H7BZ55 1655 aa10.55□□□□□ -0.72
FN1-220ENST00000480024 TSPY4P0CV99 314 aa10.55□□□□□ -0.72
FN1-220ENST00000480024 TSPY10P0CW01 314 aa10.55□□□□□ -0.72
FN1-220ENST00000480024 PPP6R1Q9UPN7 881 aa10.55□□□□□ -0.72
FN1-220ENST00000480024 NCKAP5LQ9HCH0 1330 aa10.55□□□□□ -0.72
FN1-220ENST00000480024 DNMT1P26358 1616 aaKnown RBP10.55□□□□□ -0.72
FN1-220ENST00000480024 EIF2AK4Q9P2K8 1649 aaKnown RBP10.55□□□□□ -0.72
FN1-220ENST00000480024 POLR1AO95602 1720 aaPredicted RBP10.54□□□□□ -0.72
FN1-220ENST00000480024 MIA2Q96PC5 1412 aa10.54□□□□□ -0.72
FN1-220ENST00000480024 TCOF1Q13428 1488 aaKnown RBP10.54□□□□□ -0.72
FN1-220ENST00000480024 ZC3H13Q5T200 1668 aaKnown RBP10.53□□□□□ -0.72
FN1-220ENST00000480024 TNRQ92752 1358 aa10.53□□□□□ -0.72
FN1-220ENST00000480024 PTPN23Q9H3S7 1636 aa10.53□□□□□ -0.72
FN1-220ENST00000480024 WASHC2CQ9Y4E1 1318 aa10.53□□□□□ -0.72
FN1-220ENST00000480024 CEP152O94986 1710 aa10.53□□□□□ -0.72
FN1-220ENST00000480024 MROH1Q8NDA8 1641 aa10.52□□□□□ -0.73
FN1-220ENST00000480024 FBXO31Q5XUX0 539 aaPredicted RBP10.52□□□□□ -0.73
FN1-220ENST00000480024 ABCC3O15438 1527 aa10.52□□□□□ -0.73
FN1-220ENST00000480024 ZNF335Q9H4Z2 1342 aaPredicted RBP10.51□□□□□ -0.73
FN1-220ENST00000480024 SHANK2Q9UPX8 1470 aa10.5□□□□□ -0.73
FN1-220ENST00000480024 DUOX2Q9NRD8 1548 aa10.5□□□□□ -0.73
FN1-220ENST00000480024 APLP2Q06481 763 aa10.5□□□□□ -0.73
FN1-220ENST00000480024 PKD2Q13563 968 aa10.5□□□□□ -0.73
FN1-220ENST00000480024 NEURL4Q96JN8 1562 aa10.5□□□□□ -0.73
FN1-220ENST00000480024 IQSEC2Q5JU85 1478 aa10.49□□□□□ -0.73
FN1-220ENST00000480024 NLRP1Q9C000 1473 aa10.49□□□□□ -0.73
FN1-220ENST00000480024 KIF15Q9NS87 1388 aa10.49□□□□□ -0.73
FN1-220ENST00000480024 FGD6Q6ZV73 1430 aa10.49□□□□□ -0.73
FN1-220ENST00000480024 CFAP65Q6ZU64 1925 aaKnown RBP10.48□□□□□ -0.73
FN1-220ENST00000480024 UGGT1Q9NYU2 1555 aa10.48□□□□□ -0.73
FN1-220ENST00000480024 ABCC5O15440 1437 aa10.48□□□□□ -0.73
FN1-220ENST00000480024 PRDM15P57071 1507 aaPredicted RBP10.48□□□□□ -0.73
FN1-220ENST00000480024 SPATA31D1Q6ZQQ2 1576 aa10.48□□□□□ -0.73
FN1-220ENST00000480024 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.47□□□□□ -0.73
FN1-220ENST00000480024 DAPK1P53355 1430 aa10.47□□□□□ -0.73
FN1-220ENST00000480024 ERVK-7P63135 1459 aa10.47□□□□□ -0.73
FN1-220ENST00000480024 ERBINQ96RT1 1412 aa10.46□□□□□ -0.74
FN1-220ENST00000480024 DEPDC5O75140 1603 aa10.45□□□□□ -0.74
FN1-220ENST00000480024 IQGAP1P46940 1657 aa10.44□□□□□ -0.74
FN1-220ENST00000480024 RRP7BPQ9NSQ0 103 aa10.44□□□□□ -0.74
FN1-220ENST00000480024 UBR1Q8IWV7 1749 aa10.44□□□□□ -0.74
FN1-220ENST00000480024 VWDEQ8N2E2 1590 aa10.43□□□□□ -0.74
FN1-220ENST00000480024 NPHP4O75161 1426 aaPredicted RBP10.42□□□□□ -0.74
FN1-220ENST00000480024 ANKLE2Q86XL3 938 aa10.42□□□□□ -0.74
FN1-220ENST00000480024 THEMISQ8N1K5 641 aaPredicted RBP10.42□□□□□ -0.74
FN1-220ENST00000480024 CHIC2Q9UKJ5 165 aa10.42□□□□□ -0.74
FN1-220ENST00000480024 CPS1P31327 1500 aa10.42□□□□□ -0.74
FN1-220ENST00000480024 ANKRD30AQ9BXX3 1397 aa10.41□□□□□ -0.74
FN1-220ENST00000480024 UBAP1LF5GYI3 381 aa10.41□□□□□ -0.74
FN1-220ENST00000480024 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.41□□□□□ -0.74
FN1-220ENST00000480024 MED14O60244 1454 aa10.41□□□□□ -0.74
FN1-220ENST00000480024 DISP3Q9P2K9 1392 aa10.4□□□□□ -0.74
FN1-220ENST00000480024 ARHGAP31Q2M1Z3 1444 aa10.4□□□□□ -0.75
FN1-220ENST00000480024 PIK3C2BO00750 1634 aa10.4□□□□□ -0.75
FN1-220ENST00000480024 KANK1Q14678 1352 aa10.39□□□□□ -0.75
FN1-220ENST00000480024 ADGRL2O95490 1459 aa10.39□□□□□ -0.75
FN1-220ENST00000480024 FAM50AQ14320 339 aaKnown RBP10.39□□□□□ -0.75
FN1-220ENST00000480024 STRCP1A6NGW2 1772 aa10.39□□□□□ -0.75
FN1-220ENST00000480024 EFCAB6Q5THR3 1501 aa10.38□□□□□ -0.75
FN1-220ENST00000480024 LMTK2Q8IWU2 1503 aa10.38□□□□□ -0.75
FN1-220ENST00000480024 SYNMO15061 1565 aa10.38□□□□□ -0.75
FN1-220ENST00000480024 SCAF1Q9H7N4 1312 aaKnown RBP10.37□□□□□ -0.75
FN1-220ENST00000480024 SCAF11Q99590 1463 aaKnown RBP10.37□□□□□ -0.75
FN1-220ENST00000480024 SLIT1O75093 1534 aa10.37□□□□□ -0.75
FN1-220ENST00000480024 ARHGAP23Q9P227 1491 aa10.36□□□□□ -0.75
FN1-220ENST00000480024 PIP4K2BP78356 416 aa10.35□□□□□ -0.75
FN1-220ENST00000480024 KDM5AP29375 1690 aaKnown RBP10.34□□□□□ -0.75
FN1-220ENST00000480024 ANKRD50Q9ULJ7 1429 aa10.34□□□□□ -0.75
FN1-220ENST00000480024 ADGRB3O60242 1522 aa10.33□□□□□ -0.76
FN1-220ENST00000480024 LRRC7Q96NW7 1537 aa10.33□□□□□ -0.76
FN1-220ENST00000480024 ALKQ9UM73 1620 aa10.33□□□□□ -0.76
FN1-220ENST00000480024 LTKP29376 864 aa10.33□□□□□ -0.76
FN1-220ENST00000480024 STAG3Q9UJ98 1225 aa10.33□□□□□ -0.76
FN1-220ENST00000480024 UNC13BO14795 1591 aa10.33□□□□□ -0.76
FN1-220ENST00000480024 TET3O43151 1660 aa10.33□□□□□ -0.76
FN1-220ENST00000480024 GCC2Q8IWJ2 1684 aa10.32□□□□□ -0.76
FN1-220ENST00000480024 TMEM2Q9UHN6 1383 aa10.32□□□□□ -0.76
FN1-220ENST00000480024 TOM1O60784 492 aa10.32□□□□□ -0.76
FN1-220ENST00000480024 ILDR2Q71H61 639 aa10.32□□□□□ -0.76
FN1-220ENST00000480024 TXNDC2Q86VQ3 553 aa10.32□□□□□ -0.76
FN1-220ENST00000480024 MYO5BQ9ULV0 1848 aa10.32□□□□□ -0.76
FN1-220ENST00000480024 NOS1P29475 1434 aa10.32□□□□□ -0.76
FN1-220ENST00000480024 XIRP1Q702N8 1843 aaKnown RBP10.31□□□□□ -0.76
FN1-220ENST00000480024 EID1Q9Y6B2 187 aa10.31□□□□□ -0.76
FN1-220ENST00000480024 RPRD2Q5VT52 1461 aaKnown RBP10.3□□□□□ -0.76
FN1-220ENST00000480024 HSPA1LP34931 641 aa10.3□□□□□ -0.76
FN1-220ENST00000480024 IDI1Q13907 227 aa10.3□□□□□ -0.76
FN1-220ENST00000480024 E9PCH4 1651 aa10.29□□□□□ -0.76
FN1-220ENST00000480024 PPARGC1BQ86YN6 1023 aaKnown RBP10.29□□□□□ -0.76
FN1-220ENST00000480024 MED1Q15648 1581 aaPredicted RBP10.29□□□□□ -0.76
FN1-220ENST00000480024 IQGAP3Q86VI3 1631 aa10.29□□□□□ -0.76
FN1-220ENST00000480024 SENP3Q9H4L4 574 aaPredicted RBP10.28□□□□□ -0.76
FN1-220ENST00000480024 ROCK1Q13464 1354 aa10.27□□□□□ -0.76
FN1-220ENST00000480024 ITGAEP38570 1179 aa10.27□□□□□ -0.77
FN1-220ENST00000480024 TMEM131LA2VDJ0 1609 aa10.26□□□□□ -0.77
FN1-220ENST00000480024 NWD1Q149M9 1564 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 119.6 ms