RNA–Protein interactions for RNA: ENST00000479542.1

ABCF1-206, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 2

Gene ABCF1, Length 893 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-206ENST00000479542 TSPY4P0CV99 314 aa21.23■□□□□ 0.99
ABCF1-206ENST00000479542 TSPY10P0CW01 314 aa21.23■□□□□ 0.99
ABCF1-206ENST00000479542 PZPP20742 1482 aa21.23■□□□□ 0.99
ABCF1-206ENST00000479542 DNMT1P26358 1616 aaKnown RBP21.22■□□□□ 0.99
ABCF1-206ENST00000479542 DISP3Q9P2K9 1392 aa21.22■□□□□ 0.99
ABCF1-206ENST00000479542 KDM5DQ9BY66 1539 aa21.21■□□□□ 0.99
ABCF1-206ENST00000479542 TNRQ92752 1358 aa21.21■□□□□ 0.99
ABCF1-206ENST00000479542 WASHC2CQ9Y4E1 1318 aa21.2■□□□□ 0.98
ABCF1-206ENST00000479542 MAP3K1Q13233 1512 aa21.19■□□□□ 0.98
ABCF1-206ENST00000479542 MIA2Q96PC5 1412 aa21.18■□□□□ 0.98
ABCF1-206ENST00000479542 FBXO31Q5XUX0 539 aaPredicted RBP21.17■□□□□ 0.98
ABCF1-206ENST00000479542 THEMISQ8N1K5 641 aaPredicted RBP21.17■□□□□ 0.98
ABCF1-206ENST00000479542 LRRC9Q6ZRR7 1453 aa21.17■□□□□ 0.98
ABCF1-206ENST00000479542 NLRP1Q9C000 1473 aa21.17■□□□□ 0.98
ABCF1-206ENST00000479542 VPS8Q8N3P4 1428 aa21.16■□□□□ 0.98
ABCF1-206ENST00000479542 UBAP1LF5GYI3 381 aa21.14■□□□□ 0.97
ABCF1-206ENST00000479542 SOCS7O14512 581 aa21.14■□□□□ 0.97
ABCF1-206ENST00000479542 ANKLE2Q86XL3 938 aa21.14■□□□□ 0.97
ABCF1-206ENST00000479542 MAST1Q9Y2H9 1570 aa21.14■□□□□ 0.97
ABCF1-206ENST00000479542 ILDR2Q71H61 639 aa21.13■□□□□ 0.97
ABCF1-206ENST00000479542 MED14O60244 1454 aa21.13■□□□□ 0.97
ABCF1-206ENST00000479542 CPS1P31327 1500 aa21.12■□□□□ 0.97
ABCF1-206ENST00000479542 RNF17Q9BXT8 1623 aaKnown RBP21.1■□□□□ 0.97
ABCF1-206ENST00000479542 NEURL4Q96JN8 1562 aa21.1■□□□□ 0.97
ABCF1-206ENST00000479542 SPATA31D1Q6ZQQ2 1576 aa21.09■□□□□ 0.97
ABCF1-206ENST00000479542 POLR1AO95602 1720 aaPredicted RBP21.09■□□□□ 0.97
ABCF1-206ENST00000479542 SHANK2Q9UPX8 1470 aa21.08■□□□□ 0.97
ABCF1-206ENST00000479542 DEPDC5O75140 1603 aa21.08■□□□□ 0.97
ABCF1-206ENST00000479542 EIF2AK4Q9P2K8 1649 aaKnown RBP21.07■□□□□ 0.96
ABCF1-206ENST00000479542 UGGT1Q9NYU2 1555 aa21.07■□□□□ 0.96
ABCF1-206ENST00000479542 ZC3H13Q5T200 1668 aaKnown RBP21.07■□□□□ 0.96
ABCF1-206ENST00000479542 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.07■□□□□ 0.96
ABCF1-206ENST00000479542 MYOM3Q5VTT5 1437 aa21.06■□□□□ 0.96
ABCF1-206ENST00000479542 TOM1O60784 492 aa21.05■□□□□ 0.96
ABCF1-206ENST00000479542 ABCC3O15438 1527 aa21.04■□□□□ 0.96
ABCF1-206ENST00000479542 KANK4Q5T7N3 995 aaPredicted RBP21.03■□□□□ 0.96
ABCF1-206ENST00000479542 NPHP4O75161 1426 aaPredicted RBP21.03■□□□□ 0.96
ABCF1-206ENST00000479542 DUOX2Q9NRD8 1548 aa21.01■□□□□ 0.95
ABCF1-206ENST00000479542 VWDEQ8N2E2 1590 aa21.01■□□□□ 0.95
ABCF1-206ENST00000479542 LOC105371045A0A1W2PR82 267 aa21■□□□□ 0.95
ABCF1-206ENST00000479542 ARHGAP31Q2M1Z3 1444 aa21■□□□□ 0.95
ABCF1-206ENST00000479542 ERVK-7P63135 1459 aa21■□□□□ 0.95
ABCF1-206ENST00000479542 MROH1Q8NDA8 1641 aa20.98■□□□□ 0.95
ABCF1-206ENST00000479542 ERBINQ96RT1 1412 aa20.95■□□□□ 0.95
ABCF1-206ENST00000479542 IQGAP1P46940 1657 aa20.94■□□□□ 0.94
ABCF1-206ENST00000479542 ABCC5O15440 1437 aa20.93■□□□□ 0.94
ABCF1-206ENST00000479542 HSPA1LP34931 641 aa20.92■□□□□ 0.94
ABCF1-206ENST00000479542 KIF15Q9NS87 1388 aa20.92■□□□□ 0.94
ABCF1-206ENST00000479542 PRDM15P57071 1507 aaPredicted RBP20.92■□□□□ 0.94
ABCF1-206ENST00000479542 SLIT1O75093 1534 aa20.91■□□□□ 0.94
ABCF1-206ENST00000479542 ARHGAP23Q9P227 1491 aa20.91■□□□□ 0.94
ABCF1-206ENST00000479542 PIP4K2BP78356 416 aa20.89■□□□□ 0.93
ABCF1-206ENST00000479542 UBR1Q8IWV7 1749 aa20.89■□□□□ 0.93
ABCF1-206ENST00000479542 SCAF11Q99590 1463 aaKnown RBP20.88■□□□□ 0.93
ABCF1-206ENST00000479542 APLP2Q06481 763 aa20.88■□□□□ 0.93
ABCF1-206ENST00000479542 LRRC7Q96NW7 1537 aa20.88■□□□□ 0.93
ABCF1-206ENST00000479542 ALKQ9UM73 1620 aa20.87■□□□□ 0.93
ABCF1-206ENST00000479542 CEP152O94986 1710 aa20.87■□□□□ 0.93
ABCF1-206ENST00000479542 SYNMO15061 1565 aa20.86■□□□□ 0.93
ABCF1-206ENST00000479542 DAPK1P53355 1430 aa20.86■□□□□ 0.93
ABCF1-206ENST00000479542 PTPN23Q9H3S7 1636 aa20.86■□□□□ 0.93
ABCF1-206ENST00000479542 LMTK2Q8IWU2 1503 aa20.85■□□□□ 0.93
ABCF1-206ENST00000479542 LTKP29376 864 aa20.85■□□□□ 0.93
ABCF1-206ENST00000479542 TXNDC2Q86VQ3 553 aa20.85■□□□□ 0.93
ABCF1-206ENST00000479542 RRP7BPQ9NSQ0 103 aa20.85■□□□□ 0.93
ABCF1-206ENST00000479542 CROCC2H7BZ55 1655 aa20.85■□□□□ 0.93
ABCF1-206ENST00000479542 FGD6Q6ZV73 1430 aa20.85■□□□□ 0.93
ABCF1-206ENST00000479542 KANK1Q14678 1352 aa20.85■□□□□ 0.93
ABCF1-206ENST00000479542 SCAF1Q9H7N4 1312 aaKnown RBP20.84■□□□□ 0.93
ABCF1-206ENST00000479542 EID1Q9Y6B2 187 aa20.84■□□□□ 0.93
ABCF1-206ENST00000479542 KDM5AP29375 1690 aaKnown RBP20.83■□□□□ 0.93
ABCF1-206ENST00000479542 ANKRD30AQ9BXX3 1397 aa20.83■□□□□ 0.92
ABCF1-206ENST00000479542 STRCP1A6NGW2 1772 aa20.82■□□□□ 0.92
ABCF1-206ENST00000479542 CFAP65Q6ZU64 1925 aaKnown RBP20.82■□□□□ 0.92
ABCF1-206ENST00000479542 TMEM2Q9UHN6 1383 aa20.82■□□□□ 0.92
ABCF1-206ENST00000479542 MED1Q15648 1581 aaPredicted RBP20.8■□□□□ 0.92
ABCF1-206ENST00000479542 IDI1Q13907 227 aa20.77■□□□□ 0.92
ABCF1-206ENST00000479542 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.77■□□□□ 0.923e-8■■□□□ 11.4
ABCF1-206ENST00000479542 NOS1P29475 1434 aa20.77■□□□□ 0.91
ABCF1-206ENST00000479542 ADGRL2O95490 1459 aa20.76■□□□□ 0.91
ABCF1-206ENST00000479542 SLC52A1Q9NWF4 448 aa20.76■□□□□ 0.91
ABCF1-206ENST00000479542 PIK3C2BO00750 1634 aa20.75■□□□□ 0.91
ABCF1-206ENST00000479542 STAG3Q9UJ98 1225 aa20.74■□□□□ 0.91
ABCF1-206ENST00000479542 EFCAB6Q5THR3 1501 aa20.73■□□□□ 0.91
ABCF1-206ENST00000479542 FAM135BQ49AJ0 1406 aa20.72■□□□□ 0.91
ABCF1-206ENST00000479542 KCNA6P17658 529 aa20.72■□□□□ 0.91
ABCF1-206ENST00000479542 RPRD2Q5VT52 1461 aaKnown RBP20.72■□□□□ 0.91
ABCF1-206ENST00000479542 TET3O43151 1660 aa20.71■□□□□ 0.91
ABCF1-206ENST00000479542 CHIC2Q9UKJ5 165 aa20.7■□□□□ 0.9
ABCF1-206ENST00000479542 XIRP1Q702N8 1843 aaKnown RBP20.67■□□□□ 0.9
ABCF1-206ENST00000479542 PHF23Q9BUL5 403 aaPredicted RBP20.66■□□□□ 0.9
ABCF1-206ENST00000479542 ANKRD50Q9ULJ7 1429 aa20.66■□□□□ 0.9
ABCF1-206ENST00000479542 HDGFP51858 240 aaKnown RBP20.65■□□□□ 0.9
ABCF1-206ENST00000479542 ADGRB3O60242 1522 aa20.64■□□□□ 0.9
ABCF1-206ENST00000479542 TMEM94Q12767 1356 aa20.64■□□□□ 0.89
ABCF1-206ENST00000479542 NKTRP30414 1462 aaKnown RBP20.62■□□□□ 0.89
ABCF1-206ENST00000479542 NWD1Q149M9 1564 aa20.6■□□□□ 0.89
ABCF1-206ENST00000479542 PROSER2Q86WR7 435 aaPredicted RBP20.6■□□□□ 0.89
ABCF1-206ENST00000479542 SLC26A8Q96RN1 970 aa20.6■□□□□ 0.89
ABCF1-206ENST00000479542 ZFYVE9O95405 1425 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms