RNA–Protein interactions for RNA: ENST00000478223.2

SKI-202, Transcript of SKI proto-oncogene, humanhuman

TSL 3

Gene SKI, Length 294 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKI-202ENST00000478223 TSPY10P0CW01 314 aa18.25■□□□□ 0.51
SKI-202ENST00000478223 KDM5DQ9BY66 1539 aa18.24■□□□□ 0.51
SKI-202ENST00000478223 ESF1Q9H501 851 aaKnown RBP18.24■□□□□ 0.51
SKI-202ENST00000478223 DUOX2Q9NRD8 1548 aa18.23■□□□□ 0.51
SKI-202ENST00000478223 ZMYM3Q14202 1370 aa18.23■□□□□ 0.51
SKI-202ENST00000478223 DEPDC5O75140 1603 aa18.23■□□□□ 0.51
SKI-202ENST00000478223 KIF3BO15066 747 aa18.22■□□□□ 0.51
SKI-202ENST00000478223 PPARGC1BQ86YN6 1023 aaKnown RBP18.22■□□□□ 0.51
SKI-202ENST00000478223 CAMSAP1Q5T5Y3 1602 aa18.22■□□□□ 0.51
SKI-202ENST00000478223 FAM135AQ9P2D6 1515 aa18.21■□□□□ 0.51
SKI-202ENST00000478223 UHRF1BP1Q6BDS2 1440 aa18.21■□□□□ 0.51
SKI-202ENST00000478223 PTPRKQ15262 1439 aa18.2■□□□□ 0.5
SKI-202ENST00000478223 ABCC3O15438 1527 aa18.18■□□□□ 0.5
SKI-202ENST00000478223 NPATQ14207 1427 aa18.18■□□□□ 0.5
SKI-202ENST00000478223 PRDM15P57071 1507 aaPredicted RBP18.18■□□□□ 0.5
SKI-202ENST00000478223 KIF15Q9NS87 1388 aa18.17■□□□□ 0.5
SKI-202ENST00000478223 CEP170BQ9Y4F5 1589 aaPredicted RBP18.17■□□□□ 0.5
SKI-202ENST00000478223 ADGRL2O95490 1459 aa18.16■□□□□ 0.5
SKI-202ENST00000478223 CHIC2Q9UKJ5 165 aa18.15■□□□□ 0.5
SKI-202ENST00000478223 ERBINQ96RT1 1412 aa18.15■□□□□ 0.5
SKI-202ENST00000478223 PZPP20742 1482 aa18.14■□□□□ 0.5
SKI-202ENST00000478223 FAM50AQ14320 339 aaKnown RBP18.14■□□□□ 0.49
SKI-202ENST00000478223 RRP7BPQ9NSQ0 103 aa18.14■□□□□ 0.49
SKI-202ENST00000478223 PPP6R1Q9UPN7 881 aa18.14■□□□□ 0.49
SKI-202ENST00000478223 NCOA1Q15788 1441 aa18.13■□□□□ 0.49
SKI-202ENST00000478223 POLR1AO95602 1720 aaPredicted RBP18.12■□□□□ 0.49
SKI-202ENST00000478223 WASHC2CQ9Y4E1 1318 aa18.1■□□□□ 0.49
SKI-202ENST00000478223 SPATA31D1Q6ZQQ2 1576 aa18.09■□□□□ 0.49
SKI-202ENST00000478223 VWDEQ8N2E2 1590 aa18.09■□□□□ 0.49
SKI-202ENST00000478223 ANKRD30AQ9BXX3 1397 aa18.09■□□□□ 0.49
SKI-202ENST00000478223 FBXO31Q5XUX0 539 aaPredicted RBP18.09■□□□□ 0.49
SKI-202ENST00000478223 UNC13BO14795 1591 aa18.06■□□□□ 0.48
SKI-202ENST00000478223 A2ML1A8K2U0 1454 aa18.06■□□□□ 0.48
SKI-202ENST00000478223 UBR1Q8IWV7 1749 aa18.06■□□□□ 0.48
SKI-202ENST00000478223 GCC2Q8IWJ2 1684 aa18.05■□□□□ 0.48
SKI-202ENST00000478223 TNRQ92752 1358 aa18.04■□□□□ 0.48
SKI-202ENST00000478223 ERVK-7P63135 1459 aa18.04■□□□□ 0.48
SKI-202ENST00000478223 MYO5BQ9ULV0 1848 aa18.02■□□□□ 0.48
SKI-202ENST00000478223 RRBP1Q9P2E9 1410 aaKnown RBP18.02■□□□□ 0.48
SKI-202ENST00000478223 LMTK2Q8IWU2 1503 aa18.02■□□□□ 0.47
SKI-202ENST00000478223 NEURL4Q96JN8 1562 aa18.01■□□□□ 0.47
SKI-202ENST00000478223 ANKRD50Q9ULJ7 1429 aa18.01■□□□□ 0.47
SKI-202ENST00000478223 TET3O43151 1660 aa18.01■□□□□ 0.47
SKI-202ENST00000478223 EFCAB6Q5THR3 1501 aa18.01■□□□□ 0.47
SKI-202ENST00000478223 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.01■□□□□ 0.474e-6■■■□□ 15.8
SKI-202ENST00000478223 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18■□□□□ 0.475e-7■■■■□ 24.3
SKI-202ENST00000478223 PIK3C2BO00750 1634 aa18■□□□□ 0.47
SKI-202ENST00000478223 PLA2R1Q13018 1463 aa18■□□□□ 0.47
SKI-202ENST00000478223 SYNMO15061 1565 aa18■□□□□ 0.47
SKI-202ENST00000478223 E9PCH4 1651 aa17.99■□□□□ 0.47
SKI-202ENST00000478223 UGGT1Q9NYU2 1555 aa17.99■□□□□ 0.47
SKI-202ENST00000478223 IQGAP3Q86VI3 1631 aa17.98■□□□□ 0.47
SKI-202ENST00000478223 ITGAEP38570 1179 aa17.98■□□□□ 0.47
SKI-202ENST00000478223 NLRP1Q9C000 1473 aa17.98■□□□□ 0.47
SKI-202ENST00000478223 PTPRTO14522 1441 aa17.98■□□□□ 0.47
SKI-202ENST00000478223 ARHGAP31Q2M1Z3 1444 aa17.98■□□□□ 0.47
SKI-202ENST00000478223 ROCK1Q13464 1354 aa17.97■□□□□ 0.47
SKI-202ENST00000478223 NCKAP5LQ9HCH0 1330 aa17.97■□□□□ 0.47
SKI-202ENST00000478223 KANK1Q14678 1352 aa17.94■□□□□ 0.46
SKI-202ENST00000478223 ILDR1Q86SU0 546 aaPredicted RBP17.94■□□□□ 0.46
SKI-202ENST00000478223 LTBP4Q8N2S1 1624 aa17.94■□□□□ 0.46
SKI-202ENST00000478223 KDM5AP29375 1690 aaKnown RBP17.93■□□□□ 0.46
SKI-202ENST00000478223 IQGAP1P46940 1657 aa17.93■□□□□ 0.46
SKI-202ENST00000478223 STRCP1A6NGW2 1772 aa17.9■□□□□ 0.46
SKI-202ENST00000478223 DMRT2Q9Y5R5 561 aa17.9■□□□□ 0.46
SKI-202ENST00000478223 SPHKAPQ2M3C7 1700 aa17.89■□□□□ 0.45
SKI-202ENST00000478223 NOS1P29475 1434 aa17.88■□□□□ 0.45
SKI-202ENST00000478223 PKD2Q13563 968 aa17.86■□□□□ 0.45
SKI-202ENST00000478223 RPRD2Q5VT52 1461 aaKnown RBP17.86■□□□□ 0.45
SKI-202ENST00000478223 ADGRB3O60242 1522 aa17.86■□□□□ 0.45
SKI-202ENST00000478223 SLIT1O75093 1534 aa17.85■□□□□ 0.45
SKI-202ENST00000478223 NAIPQ13075 1403 aa17.85■□□□□ 0.45
SKI-202ENST00000478223 MED14O60244 1454 aa17.84■□□□□ 0.45
SKI-202ENST00000478223 ARHGAP23Q9P227 1491 aa17.84■□□□□ 0.45
SKI-202ENST00000478223 CERKQ8TCT0 537 aa17.84■□□□□ 0.45
SKI-202ENST00000478223 TMEM131LA2VDJ0 1609 aa17.83■□□□□ 0.45
SKI-202ENST00000478223 THEMISQ8N1K5 641 aaPredicted RBP17.83■□□□□ 0.44
SKI-202ENST00000478223 ZNF335Q9H4Z2 1342 aaPredicted RBP17.82■□□□□ 0.44
SKI-202ENST00000478223 NPHP4O75161 1426 aaPredicted RBP17.81■□□□□ 0.44
SKI-202ENST00000478223 FBXO41Q8TF61 875 aa17.8■□□□□ 0.44
SKI-202ENST00000478223 NUP155O75694 1391 aa17.79■□□□□ 0.44
SKI-202ENST00000478223 XIRP1Q702N8 1843 aaKnown RBP17.79■□□□□ 0.44
SKI-202ENST00000478223 IDI1Q13907 227 aa17.79■□□□□ 0.44
SKI-202ENST00000478223 SCAF11Q99590 1463 aaKnown RBP17.79■□□□□ 0.44
SKI-202ENST00000478223 ANKLE2Q86XL3 938 aa17.78■□□□□ 0.44
SKI-202ENST00000478223 HFM1A2PYH4 1435 aa17.78■□□□□ 0.44
SKI-202ENST00000478223 LTKP29376 864 aa17.76■□□□□ 0.43
SKI-202ENST00000478223 KIF1BO60333 1816 aa17.76■□□□□ 0.43
SKI-202ENST00000478223 CLTCL1P53675 1640 aa17.76■□□□□ 0.43
SKI-202ENST00000478223 TMEM2Q9UHN6 1383 aa17.74■□□□□ 0.43
SKI-202ENST00000478223 IQSEC2Q5JU85 1478 aa17.74■□□□□ 0.43
SKI-202ENST00000478223 CPS1P31327 1500 aa17.71■□□□□ 0.43
SKI-202ENST00000478223 TXNDC2Q86VQ3 553 aa17.7■□□□□ 0.42
SKI-202ENST00000478223 SLC52A1Q9NWF4 448 aa17.7■□□□□ 0.42
SKI-202ENST00000478223 STAG3Q9UJ98 1225 aa17.7■□□□□ 0.42
SKI-202ENST00000478223 ZFYVE9O95405 1425 aa17.7■□□□□ 0.42
SKI-202ENST00000478223 CHD2O14647 1828 aaKnown RBP17.7■□□□□ 0.42
SKI-202ENST00000478223 TRPM2O94759 1503 aa17.69■□□□□ 0.42
SKI-202ENST00000478223 ALKQ9UM73 1620 aa17.66■□□□□ 0.42
SKI-202ENST00000478223 NRXN3Q9Y4C0 1643 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms