RNA–Protein interactions for RNA: ENST00000477890.6

CPSF7-211, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,234 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-211ENST00000477890 LOC105371045A0A1W2PR82 267 aa18.68■□□□□ 0.58
CPSF7-211ENST00000477890 KDM5DQ9BY66 1539 aa18.68■□□□□ 0.58
CPSF7-211ENST00000477890 DNMT1P26358 1616 aaKnown RBP18.67■□□□□ 0.58
CPSF7-211ENST00000477890 LRRC9Q6ZRR7 1453 aa18.67■□□□□ 0.58
CPSF7-211ENST00000477890 TSPY4P0CV99 314 aa18.67■□□□□ 0.58
CPSF7-211ENST00000477890 TSPY10P0CW01 314 aa18.67■□□□□ 0.58
CPSF7-211ENST00000477890 FAM135AQ9P2D6 1515 aa18.66■□□□□ 0.58
CPSF7-211ENST00000477890 FBXO31Q5XUX0 539 aaPredicted RBP18.66■□□□□ 0.58
CPSF7-211ENST00000477890 WASHC2CQ9Y4E1 1318 aa18.66■□□□□ 0.58
CPSF7-211ENST00000477890 PZPP20742 1482 aa18.65■□□□□ 0.58
CPSF7-211ENST00000477890 TNRQ92752 1358 aa18.65■□□□□ 0.58
CPSF7-211ENST00000477890 DISP3Q9P2K9 1392 aa18.64■□□□□ 0.57
CPSF7-211ENST00000477890 POLR1AO95602 1720 aaPredicted RBP18.62■□□□□ 0.57
CPSF7-211ENST00000477890 KANK4Q5T7N3 995 aaPredicted RBP18.61■□□□□ 0.57
CPSF7-211ENST00000477890 MAST1Q9Y2H9 1570 aa18.59■□□□□ 0.57
CPSF7-211ENST00000477890 MAP3K1Q13233 1512 aa18.59■□□□□ 0.57
CPSF7-211ENST00000477890 UBAP1LF5GYI3 381 aa18.59■□□□□ 0.57
CPSF7-211ENST00000477890 RNF17Q9BXT8 1623 aaKnown RBP18.58■□□□□ 0.56
CPSF7-211ENST00000477890 MYOM3Q5VTT5 1437 aa18.57■□□□□ 0.56
CPSF7-211ENST00000477890 MIA2Q96PC5 1412 aa18.57■□□□□ 0.56
CPSF7-211ENST00000477890 NEURL4Q96JN8 1562 aa18.57■□□□□ 0.56
CPSF7-211ENST00000477890 SPATA31D1Q6ZQQ2 1576 aa18.56■□□□□ 0.56
CPSF7-211ENST00000477890 NLRP1Q9C000 1473 aa18.56■□□□□ 0.56
CPSF7-211ENST00000477890 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.55■□□□□ 0.561e-11■■□□□ 12.1
CPSF7-211ENST00000477890 ZC3H13Q5T200 1668 aaKnown RBP18.55■□□□□ 0.56
CPSF7-211ENST00000477890 ILDR2Q71H61 639 aa18.55■□□□□ 0.56
CPSF7-211ENST00000477890 THEMISQ8N1K5 641 aaPredicted RBP18.55■□□□□ 0.56
CPSF7-211ENST00000477890 EIF2AK4Q9P2K8 1649 aaKnown RBP18.55■□□□□ 0.56
CPSF7-211ENST00000477890 UGGT1Q9NYU2 1555 aa18.55■□□□□ 0.56
CPSF7-211ENST00000477890 ABCC3O15438 1527 aa18.54■□□□□ 0.56
CPSF7-211ENST00000477890 ANKLE2Q86XL3 938 aa18.54■□□□□ 0.56
CPSF7-211ENST00000477890 MROH1Q8NDA8 1641 aa18.51■□□□□ 0.55
CPSF7-211ENST00000477890 CEP152O94986 1710 aa18.51■□□□□ 0.55
CPSF7-211ENST00000477890 CPS1P31327 1500 aa18.5■□□□□ 0.55
CPSF7-211ENST00000477890 CFAP65Q6ZU64 1925 aaKnown RBP18.5■□□□□ 0.55
CPSF7-211ENST00000477890 SHANK2Q9UPX8 1470 aa18.5■□□□□ 0.55
CPSF7-211ENST00000477890 DUOX2Q9NRD8 1548 aa18.49■□□□□ 0.55
CPSF7-211ENST00000477890 DEPDC5O75140 1603 aa18.49■□□□□ 0.55
CPSF7-211ENST00000477890 NPHP4O75161 1426 aaPredicted RBP18.49■□□□□ 0.55
CPSF7-211ENST00000477890 ERVK-7P63135 1459 aa18.48■□□□□ 0.55
CPSF7-211ENST00000477890 CROCC2H7BZ55 1655 aa18.47■□□□□ 0.55
CPSF7-211ENST00000477890 MED14O60244 1454 aa18.47■□□□□ 0.55
CPSF7-211ENST00000477890 APLP2Q06481 763 aa18.47■□□□□ 0.55
CPSF7-211ENST00000477890 VWDEQ8N2E2 1590 aa18.47■□□□□ 0.55
CPSF7-211ENST00000477890 PTPN23Q9H3S7 1636 aa18.46■□□□□ 0.55
CPSF7-211ENST00000477890 IQGAP1P46940 1657 aa18.46■□□□□ 0.55
CPSF7-211ENST00000477890 SCAF1Q9H7N4 1312 aaKnown RBP18.46■□□□□ 0.55
CPSF7-211ENST00000477890 KIF15Q9NS87 1388 aa18.45■□□□□ 0.54
CPSF7-211ENST00000477890 ABCC5O15440 1437 aa18.44■□□□□ 0.54
CPSF7-211ENST00000477890 TOM1O60784 492 aa18.44■□□□□ 0.54
CPSF7-211ENST00000477890 PIP4K2BP78356 416 aa18.44■□□□□ 0.54
CPSF7-211ENST00000477890 SOCS7O14512 581 aa18.43■□□□□ 0.54
CPSF7-211ENST00000477890 RRP7BPQ9NSQ0 103 aa18.43■□□□□ 0.54
CPSF7-211ENST00000477890 UBR1Q8IWV7 1749 aa18.43■□□□□ 0.54
CPSF7-211ENST00000477890 ERBINQ96RT1 1412 aa18.42■□□□□ 0.54
CPSF7-211ENST00000477890 PRDM15P57071 1507 aaPredicted RBP18.42■□□□□ 0.54
CPSF7-211ENST00000477890 DAPK1P53355 1430 aa18.41■□□□□ 0.54
CPSF7-211ENST00000477890 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.4■□□□□ 0.542e-8■□□□□ 11
CPSF7-211ENST00000477890 FGD6Q6ZV73 1430 aa18.4■□□□□ 0.54
CPSF7-211ENST00000477890 HSPA1LP34931 641 aa18.39■□□□□ 0.53
CPSF7-211ENST00000477890 ARHGAP31Q2M1Z3 1444 aa18.39■□□□□ 0.53
CPSF7-211ENST00000477890 STRCP1A6NGW2 1772 aa18.38■□□□□ 0.53
CPSF7-211ENST00000477890 KANK1Q14678 1352 aa18.36■□□□□ 0.53
CPSF7-211ENST00000477890 SCAF11Q99590 1463 aaKnown RBP18.36■□□□□ 0.53
CPSF7-211ENST00000477890 CHIC2Q9UKJ5 165 aa18.36■□□□□ 0.53
CPSF7-211ENST00000477890 ANKRD30AQ9BXX3 1397 aa18.34■□□□□ 0.53
CPSF7-211ENST00000477890 TXNDC2Q86VQ3 553 aa18.34■□□□□ 0.53
CPSF7-211ENST00000477890 PIK3C2BO00750 1634 aa18.34■□□□□ 0.53
CPSF7-211ENST00000477890 ALKQ9UM73 1620 aa18.34■□□□□ 0.53
CPSF7-211ENST00000477890 SYNMO15061 1565 aa18.34■□□□□ 0.53
CPSF7-211ENST00000477890 SLIT1O75093 1534 aa18.33■□□□□ 0.53
CPSF7-211ENST00000477890 LRRC7Q96NW7 1537 aa18.33■□□□□ 0.53
CPSF7-211ENST00000477890 ARHGAP23Q9P227 1491 aa18.33■□□□□ 0.53
CPSF7-211ENST00000477890 LTKP29376 864 aa18.33■□□□□ 0.52
CPSF7-211ENST00000477890 STAG3Q9UJ98 1225 aa18.31■□□□□ 0.52
CPSF7-211ENST00000477890 EID1Q9Y6B2 187 aa18.31■□□□□ 0.52
CPSF7-211ENST00000477890 MED1Q15648 1581 aaPredicted RBP18.3■□□□□ 0.52
CPSF7-211ENST00000477890 LMTK2Q8IWU2 1503 aa18.29■□□□□ 0.52
CPSF7-211ENST00000477890 TMEM2Q9UHN6 1383 aa18.28■□□□□ 0.52
CPSF7-211ENST00000477890 FAM50AQ14320 339 aaKnown RBP18.27■□□□□ 0.52
CPSF7-211ENST00000477890 SENP3Q9H4L4 574 aaPredicted RBP18.27■□□□□ 0.52
CPSF7-211ENST00000477890 EFCAB6Q5THR3 1501 aa18.27■□□□□ 0.51
CPSF7-211ENST00000477890 KDM5AP29375 1690 aaKnown RBP18.26■□□□□ 0.51
CPSF7-211ENST00000477890 IDI1Q13907 227 aa18.26■□□□□ 0.51
CPSF7-211ENST00000477890 ADGRL2O95490 1459 aa18.26■□□□□ 0.51
CPSF7-211ENST00000477890 XIRP1Q702N8 1843 aaKnown RBP18.24■□□□□ 0.51
CPSF7-211ENST00000477890 NOS1P29475 1434 aa18.23■□□□□ 0.51
CPSF7-211ENST00000477890 ANKRD50Q9ULJ7 1429 aa18.21■□□□□ 0.51
CPSF7-211ENST00000477890 ADGRB3O60242 1522 aa18.2■□□□□ 0.5
CPSF7-211ENST00000477890 PHF23Q9BUL5 403 aaPredicted RBP18.19■□□□□ 0.5
CPSF7-211ENST00000477890 SLC26A8Q96RN1 970 aa18.18■□□□□ 0.5
CPSF7-211ENST00000477890 SLC52A1Q9NWF4 448 aa18.18■□□□□ 0.5
CPSF7-211ENST00000477890 TET3O43151 1660 aa18.18■□□□□ 0.5
CPSF7-211ENST00000477890 RPRD2Q5VT52 1461 aaKnown RBP18.17■□□□□ 0.5
CPSF7-211ENST00000477890 KCNA6P17658 529 aa18.16■□□□□ 0.5
CPSF7-211ENST00000477890 TMEM94Q12767 1356 aa18.16■□□□□ 0.5
CPSF7-211ENST00000477890 MYO5BQ9ULV0 1848 aa18.15■□□□□ 0.5
CPSF7-211ENST00000477890 BCANQ96GW7 911 aa18.15■□□□□ 0.5
CPSF7-211ENST00000477890 GCC2Q8IWJ2 1684 aa18.13■□□□□ 0.49
CPSF7-211ENST00000477890 PROSER2Q86WR7 435 aaPredicted RBP18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms