RNA–Protein interactions for RNA: ENST00000477477.1

HDLBP-236, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 340 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-236ENST00000477477 TSPY4P0CV99 314 aa18.01■□□□□ 0.47
HDLBP-236ENST00000477477 TSPY10P0CW01 314 aa18.01■□□□□ 0.47
HDLBP-236ENST00000477477 KANK4Q5T7N3 995 aaPredicted RBP18.01■□□□□ 0.47
HDLBP-236ENST00000477477 TCOF1Q13428 1488 aaKnown RBP18.01■□□□□ 0.47
HDLBP-236ENST00000477477 A2ML1A8K2U0 1454 aa18■□□□□ 0.47
HDLBP-236ENST00000477477 PKD2Q13563 968 aa17.99■□□□□ 0.47
HDLBP-236ENST00000477477 PZPP20742 1482 aa17.99■□□□□ 0.47
HDLBP-236ENST00000477477 MIA2Q96PC5 1412 aa17.98■□□□□ 0.47
HDLBP-236ENST00000477477 IQSEC2Q5JU85 1478 aa17.98■□□□□ 0.47
HDLBP-236ENST00000477477 MAST1Q9Y2H9 1570 aa17.98■□□□□ 0.47
HDLBP-236ENST00000477477 MYOM3Q5VTT5 1437 aa17.98■□□□□ 0.47
HDLBP-236ENST00000477477 WASHC2CQ9Y4E1 1318 aa17.98■□□□□ 0.47
HDLBP-236ENST00000477477 TNRQ92752 1358 aa17.97■□□□□ 0.47
HDLBP-236ENST00000477477 FBXO31Q5XUX0 539 aaPredicted RBP17.97■□□□□ 0.47
HDLBP-236ENST00000477477 DNMT1P26358 1616 aaKnown RBP17.95■□□□□ 0.46
HDLBP-236ENST00000477477 ZNF335Q9H4Z2 1342 aaPredicted RBP17.95■□□□□ 0.46
HDLBP-236ENST00000477477 RNF17Q9BXT8 1623 aaKnown RBP17.93■□□□□ 0.46
HDLBP-236ENST00000477477 NLRP1Q9C000 1473 aa17.9■□□□□ 0.46
HDLBP-236ENST00000477477 ABCC3O15438 1527 aa17.9■□□□□ 0.46
HDLBP-236ENST00000477477 EIF2AK4Q9P2K8 1649 aaKnown RBP17.9■□□□□ 0.46
HDLBP-236ENST00000477477 NEURL4Q96JN8 1562 aa17.87■□□□□ 0.45
HDLBP-236ENST00000477477 MROH1Q8NDA8 1641 aa17.87■□□□□ 0.45
HDLBP-236ENST00000477477 ZC3H13Q5T200 1668 aaKnown RBP17.87■□□□□ 0.45
HDLBP-236ENST00000477477 APLP2Q06481 763 aa17.87■□□□□ 0.45
HDLBP-236ENST00000477477 SHANK2Q9UPX8 1470 aa17.87■□□□□ 0.45
HDLBP-236ENST00000477477 DUOX2Q9NRD8 1548 aa17.87■□□□□ 0.45
HDLBP-236ENST00000477477 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.86■□□□□ 0.45
HDLBP-236ENST00000477477 ABCC5O15440 1437 aa17.85■□□□□ 0.45
HDLBP-236ENST00000477477 SPATA31D1Q6ZQQ2 1576 aa17.85■□□□□ 0.45
HDLBP-236ENST00000477477 THEMISQ8N1K5 641 aaPredicted RBP17.85■□□□□ 0.45
HDLBP-236ENST00000477477 UGGT1Q9NYU2 1555 aa17.85■□□□□ 0.45
HDLBP-236ENST00000477477 POLR1AO95602 1720 aaPredicted RBP17.84■□□□□ 0.45
HDLBP-236ENST00000477477 PTPN23Q9H3S7 1636 aa17.84■□□□□ 0.45
HDLBP-236ENST00000477477 KIF15Q9NS87 1388 aa17.84■□□□□ 0.45
HDLBP-236ENST00000477477 ERVK-7P63135 1459 aa17.83■□□□□ 0.45
HDLBP-236ENST00000477477 ANKLE2Q86XL3 938 aa17.83■□□□□ 0.44
HDLBP-236ENST00000477477 FGD6Q6ZV73 1430 aa17.82■□□□□ 0.44
HDLBP-236ENST00000477477 CROCC2H7BZ55 1655 aa17.82■□□□□ 0.44
HDLBP-236ENST00000477477 DAPK1P53355 1430 aa17.81■□□□□ 0.44
HDLBP-236ENST00000477477 ERBINQ96RT1 1412 aa17.81■□□□□ 0.44
HDLBP-236ENST00000477477 UBAP1LF5GYI3 381 aa17.81■□□□□ 0.44
HDLBP-236ENST00000477477 PRDM15P57071 1507 aaPredicted RBP17.81■□□□□ 0.44
HDLBP-236ENST00000477477 MED14O60244 1454 aa17.81■□□□□ 0.44
HDLBP-236ENST00000477477 NPHP4O75161 1426 aaPredicted RBP17.8■□□□□ 0.44
HDLBP-236ENST00000477477 DEPDC5O75140 1603 aa17.8■□□□□ 0.44
HDLBP-236ENST00000477477 CPS1P31327 1500 aa17.79■□□□□ 0.44
HDLBP-236ENST00000477477 RRP7BPQ9NSQ0 103 aa17.79■□□□□ 0.44
HDLBP-236ENST00000477477 DISP3Q9P2K9 1392 aa17.79■□□□□ 0.44
HDLBP-236ENST00000477477 CEP152O94986 1710 aa17.78■□□□□ 0.44
HDLBP-236ENST00000477477 ARHGAP31Q2M1Z3 1444 aa17.77■□□□□ 0.44
HDLBP-236ENST00000477477 VWDEQ8N2E2 1590 aa17.77■□□□□ 0.44
HDLBP-236ENST00000477477 ANKRD30AQ9BXX3 1397 aa17.74■□□□□ 0.43
HDLBP-236ENST00000477477 IQGAP1P46940 1657 aa17.73■□□□□ 0.43
HDLBP-236ENST00000477477 KANK1Q14678 1352 aa17.72■□□□□ 0.43
HDLBP-236ENST00000477477 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.72■□□□□ 0.435e-10■■□□□ 13.2
HDLBP-236ENST00000477477 CHIC2Q9UKJ5 165 aa17.72■□□□□ 0.43
HDLBP-236ENST00000477477 UBR1Q8IWV7 1749 aa17.71■□□□□ 0.43
HDLBP-236ENST00000477477 ILDR2Q71H61 639 aa17.7■□□□□ 0.42
HDLBP-236ENST00000477477 LMTK2Q8IWU2 1503 aa17.7■□□□□ 0.42
HDLBP-236ENST00000477477 ADGRL2O95490 1459 aa17.69■□□□□ 0.42
HDLBP-236ENST00000477477 SCAF11Q99590 1463 aaKnown RBP17.69■□□□□ 0.42
HDLBP-236ENST00000477477 SLIT1O75093 1534 aa17.69■□□□□ 0.42
HDLBP-236ENST00000477477 TOM1O60784 492 aa17.69■□□□□ 0.42
HDLBP-236ENST00000477477 ARHGAP23Q9P227 1491 aa17.69■□□□□ 0.42
HDLBP-236ENST00000477477 PIP4K2BP78356 416 aa17.66■□□□□ 0.42
HDLBP-236ENST00000477477 CFAP65Q6ZU64 1925 aaKnown RBP17.66■□□□□ 0.42
HDLBP-236ENST00000477477 SCAF1Q9H7N4 1312 aaKnown RBP17.66■□□□□ 0.42
HDLBP-236ENST00000477477 LTKP29376 864 aa17.65■□□□□ 0.42
HDLBP-236ENST00000477477 LRRC7Q96NW7 1537 aa17.64■□□□□ 0.41
HDLBP-236ENST00000477477 FAM50AQ14320 339 aaKnown RBP17.64■□□□□ 0.41
HDLBP-236ENST00000477477 TXNDC2Q86VQ3 553 aa17.64■□□□□ 0.41
HDLBP-236ENST00000477477 PIK3C2BO00750 1634 aa17.64■□□□□ 0.41
HDLBP-236ENST00000477477 TMEM2Q9UHN6 1383 aa17.64■□□□□ 0.41
HDLBP-236ENST00000477477 EFCAB6Q5THR3 1501 aa17.63■□□□□ 0.41
HDLBP-236ENST00000477477 SYNMO15061 1565 aa17.63■□□□□ 0.41
HDLBP-236ENST00000477477 ALKQ9UM73 1620 aa17.63■□□□□ 0.41
HDLBP-236ENST00000477477 STRCP1A6NGW2 1772 aa17.63■□□□□ 0.41
HDLBP-236ENST00000477477 HSPA1LP34931 641 aa17.62■□□□□ 0.41
HDLBP-236ENST00000477477 EID1Q9Y6B2 187 aa17.62■□□□□ 0.41
HDLBP-236ENST00000477477 NOS1P29475 1434 aa17.62■□□□□ 0.41
HDLBP-236ENST00000477477 ANKRD50Q9ULJ7 1429 aa17.62■□□□□ 0.41
HDLBP-236ENST00000477477 IDI1Q13907 227 aa17.61■□□□□ 0.41
HDLBP-236ENST00000477477 STAG3Q9UJ98 1225 aa17.61■□□□□ 0.41
HDLBP-236ENST00000477477 KDM5AP29375 1690 aaKnown RBP17.59■□□□□ 0.41
HDLBP-236ENST00000477477 SOCS7O14512 581 aa17.59■□□□□ 0.41
HDLBP-236ENST00000477477 ADGRB3O60242 1522 aa17.57■□□□□ 0.4
HDLBP-236ENST00000477477 RPRD2Q5VT52 1461 aaKnown RBP17.56■□□□□ 0.4
HDLBP-236ENST00000477477 SLC52A1Q9NWF4 448 aa17.55■□□□□ 0.4
HDLBP-236ENST00000477477 MED1Q15648 1581 aaPredicted RBP17.53■□□□□ 0.4
HDLBP-236ENST00000477477 UNC13BO14795 1591 aa17.52■□□□□ 0.39
HDLBP-236ENST00000477477 ROCK1Q13464 1354 aa17.52■□□□□ 0.39
HDLBP-236ENST00000477477 TET3O43151 1660 aa17.52■□□□□ 0.39
HDLBP-236ENST00000477477 SLC26A8Q96RN1 970 aa17.49■□□□□ 0.39
HDLBP-236ENST00000477477 KCNA6P17658 529 aa17.48■□□□□ 0.39
HDLBP-236ENST00000477477 ZFYVE9O95405 1425 aa17.47■□□□□ 0.39
HDLBP-236ENST00000477477 XIRP1Q702N8 1843 aaKnown RBP17.47■□□□□ 0.39
HDLBP-236ENST00000477477 TMEM94Q12767 1356 aa17.47■□□□□ 0.39
HDLBP-236ENST00000477477 GCC2Q8IWJ2 1684 aa17.47■□□□□ 0.39
HDLBP-236ENST00000477477 NWD1Q149M9 1564 aa17.45■□□□□ 0.38
HDLBP-236ENST00000477477 NKTRP30414 1462 aaKnown RBP17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms