RNA–Protein interactions for RNA: ENST00000477109.1

KDM5C-211, Transcript of lysine demethylase 5C, humanhuman

TSL 3

Gene KDM5C, Length 297 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5C-211ENST00000477109 KIF3BO15066 747 aa17.72■□□□□ 0.43
KDM5C-211ENST00000477109 APLP2Q06481 763 aa17.71■□□□□ 0.43
KDM5C-211ENST00000477109 FBXO31Q5XUX0 539 aaPredicted RBP17.71■□□□□ 0.43
KDM5C-211ENST00000477109 A2ML1A8K2U0 1454 aa17.7■□□□□ 0.42
KDM5C-211ENST00000477109 CCDC141Q6ZP82 1450 aa17.69■□□□□ 0.42
KDM5C-211ENST00000477109 DNMT1P26358 1616 aaKnown RBP17.69■□□□□ 0.42
KDM5C-211ENST00000477109 NCOA2Q15596 1464 aa17.68■□□□□ 0.42
KDM5C-211ENST00000477109 TNRQ92752 1358 aa17.67■□□□□ 0.42
KDM5C-211ENST00000477109 CAMSAP2Q08AD1 1489 aa17.67■□□□□ 0.42
KDM5C-211ENST00000477109 LRRC9Q6ZRR7 1453 aa17.67■□□□□ 0.42
KDM5C-211ENST00000477109 RSPH4AQ5TD94 716 aa17.66■□□□□ 0.42
KDM5C-211ENST00000477109 WASHC2CQ9Y4E1 1318 aa17.66■□□□□ 0.42
KDM5C-211ENST00000477109 KDM5DQ9BY66 1539 aa17.64■□□□□ 0.41
KDM5C-211ENST00000477109 PZPP20742 1482 aa17.63■□□□□ 0.41
KDM5C-211ENST00000477109 TSPY4P0CV99 314 aa17.62■□□□□ 0.41
KDM5C-211ENST00000477109 TSPY10P0CW01 314 aa17.62■□□□□ 0.41
KDM5C-211ENST00000477109 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.61■□□□□ 0.41
KDM5C-211ENST00000477109 NEURL4Q96JN8 1562 aa17.61■□□□□ 0.41
KDM5C-211ENST00000477109 ANKLE2Q86XL3 938 aa17.6■□□□□ 0.41
KDM5C-211ENST00000477109 SCAF1Q9H7N4 1312 aaKnown RBP17.6■□□□□ 0.41
KDM5C-211ENST00000477109 FAM135AQ9P2D6 1515 aa17.6■□□□□ 0.41
KDM5C-211ENST00000477109 POLR1AO95602 1720 aaPredicted RBP17.6■□□□□ 0.41
KDM5C-211ENST00000477109 MIA2Q96PC5 1412 aa17.59■□□□□ 0.41
KDM5C-211ENST00000477109 THEMISQ8N1K5 641 aaPredicted RBP17.59■□□□□ 0.41
KDM5C-211ENST00000477109 ARHGEF5Q12774 1597 aa17.58■□□□□ 0.41
KDM5C-211ENST00000477109 PIP4K2BP78356 416 aa17.58■□□□□ 0.4
KDM5C-211ENST00000477109 KANK4Q5T7N3 995 aaPredicted RBP17.58■□□□□ 0.4
KDM5C-211ENST00000477109 SHANK2Q9UPX8 1470 aa17.57■□□□□ 0.4
KDM5C-211ENST00000477109 CPS1P31327 1500 aa17.57■□□□□ 0.4
KDM5C-211ENST00000477109 TOM1O60784 492 aa17.56■□□□□ 0.4
KDM5C-211ENST00000477109 NLRP1Q9C000 1473 aa17.56■□□□□ 0.4
KDM5C-211ENST00000477109 UGGT1Q9NYU2 1555 aa17.55■□□□□ 0.4
KDM5C-211ENST00000477109 HSPA1LP34931 641 aa17.55■□□□□ 0.4
KDM5C-211ENST00000477109 NPHP4O75161 1426 aaPredicted RBP17.54■□□□□ 0.4
KDM5C-211ENST00000477109 VWDEQ8N2E2 1590 aa17.52■□□□□ 0.39
KDM5C-211ENST00000477109 MED14O60244 1454 aa17.51■□□□□ 0.39
KDM5C-211ENST00000477109 ABCC3O15438 1527 aa17.51■□□□□ 0.39
KDM5C-211ENST00000477109 RNF17Q9BXT8 1623 aaKnown RBP17.5■□□□□ 0.39
KDM5C-211ENST00000477109 MAST1Q9Y2H9 1570 aa17.5■□□□□ 0.39
KDM5C-211ENST00000477109 DEPDC5O75140 1603 aa17.5■□□□□ 0.39
KDM5C-211ENST00000477109 MYOM3Q5VTT5 1437 aa17.47■□□□□ 0.39
KDM5C-211ENST00000477109 ERVK-7P63135 1459 aa17.47■□□□□ 0.39
KDM5C-211ENST00000477109 IQGAP1P46940 1657 aa17.47■□□□□ 0.39
KDM5C-211ENST00000477109 ZC3H13Q5T200 1668 aaKnown RBP17.47■□□□□ 0.39
KDM5C-211ENST00000477109 MROH1Q8NDA8 1641 aa17.46■□□□□ 0.39
KDM5C-211ENST00000477109 EIF2AK4Q9P2K8 1649 aaKnown RBP17.46■□□□□ 0.39
KDM5C-211ENST00000477109 MED1Q15648 1581 aaPredicted RBP17.45■□□□□ 0.38
KDM5C-211ENST00000477109 CFAP65Q6ZU64 1925 aaKnown RBP17.45■□□□□ 0.38
KDM5C-211ENST00000477109 CEP152O94986 1710 aa17.44■□□□□ 0.38
KDM5C-211ENST00000477109 ALKQ9UM73 1620 aa17.43■□□□□ 0.38
KDM5C-211ENST00000477109 SENP3Q9H4L4 574 aaPredicted RBP17.43■□□□□ 0.38
KDM5C-211ENST00000477109 STRCP1A6NGW2 1772 aa17.43■□□□□ 0.38
KDM5C-211ENST00000477109 DUOX2Q9NRD8 1548 aa17.42■□□□□ 0.38
KDM5C-211ENST00000477109 LRRC7Q96NW7 1537 aa17.42■□□□□ 0.38
KDM5C-211ENST00000477109 RRP7BPQ9NSQ0 103 aa17.4■□□□□ 0.38
KDM5C-211ENST00000477109 UBR1Q8IWV7 1749 aa17.4■□□□□ 0.38
KDM5C-211ENST00000477109 KIF15Q9NS87 1388 aa17.4■□□□□ 0.38
KDM5C-211ENST00000477109 LTKP29376 864 aa17.39■□□□□ 0.37
KDM5C-211ENST00000477109 TXNDC2Q86VQ3 553 aa17.39■□□□□ 0.37
KDM5C-211ENST00000477109 FGD6Q6ZV73 1430 aa17.38■□□□□ 0.37
KDM5C-211ENST00000477109 SCAF11Q99590 1463 aaKnown RBP17.38■□□□□ 0.37
KDM5C-211ENST00000477109 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.38■□□□□ 0.37
KDM5C-211ENST00000477109 PHF23Q9BUL5 403 aaPredicted RBP17.38■□□□□ 0.37
KDM5C-211ENST00000477109 ABCC5O15440 1437 aa17.38■□□□□ 0.37
KDM5C-211ENST00000477109 SYNMO15061 1565 aa17.36■□□□□ 0.37
KDM5C-211ENST00000477109 PTPN23Q9H3S7 1636 aa17.36■□□□□ 0.37
KDM5C-211ENST00000477109 ARHGAP31Q2M1Z3 1444 aa17.36■□□□□ 0.37
KDM5C-211ENST00000477109 PRDM15P57071 1507 aaPredicted RBP17.36■□□□□ 0.37
KDM5C-211ENST00000477109 ERBINQ96RT1 1412 aa17.35■□□□□ 0.37
KDM5C-211ENST00000477109 ARHGAP23Q9P227 1491 aa17.35■□□□□ 0.37
KDM5C-211ENST00000477109 SLIT1O75093 1534 aa17.34■□□□□ 0.37
KDM5C-211ENST00000477109 EID1Q9Y6B2 187 aa17.34■□□□□ 0.37
KDM5C-211ENST00000477109 CROCC2H7BZ55 1655 aa17.33■□□□□ 0.37
KDM5C-211ENST00000477109 STAG3Q9UJ98 1225 aa17.33■□□□□ 0.36
KDM5C-211ENST00000477109 DAPK1P53355 1430 aa17.32■□□□□ 0.36
KDM5C-211ENST00000477109 PPARGC1BQ86YN6 1023 aaKnown RBP17.32■□□□□ 0.36
KDM5C-211ENST00000477109 KANK1Q14678 1352 aa17.31■□□□□ 0.36
KDM5C-211ENST00000477109 CHIC2Q9UKJ5 165 aa17.31■□□□□ 0.36
KDM5C-211ENST00000477109 PIK3C2BO00750 1634 aa17.31■□□□□ 0.36
KDM5C-211ENST00000477109 TMEM2Q9UHN6 1383 aa17.3■□□□□ 0.36
KDM5C-211ENST00000477109 IDI1Q13907 227 aa17.29■□□□□ 0.36
KDM5C-211ENST00000477109 RRBP1Q9P2E9 1410 aaKnown RBP17.29■□□□□ 0.36
KDM5C-211ENST00000477109 ANKRD30AQ9BXX3 1397 aa17.28■□□□□ 0.36
KDM5C-211ENST00000477109 XIRP1Q702N8 1843 aaKnown RBP17.27■□□□□ 0.36
KDM5C-211ENST00000477109 EFCAB6Q5THR3 1501 aa17.26■□□□□ 0.35
KDM5C-211ENST00000477109 SLC26A8Q96RN1 970 aa17.25■□□□□ 0.35
KDM5C-211ENST00000477109 LMTK2Q8IWU2 1503 aa17.25■□□□□ 0.35
KDM5C-211ENST00000477109 TMEM94Q12767 1356 aa17.24■□□□□ 0.35
KDM5C-211ENST00000477109 KCNA6P17658 529 aa17.23■□□□□ 0.35
KDM5C-211ENST00000477109 FAM50AQ14320 339 aaKnown RBP17.23■□□□□ 0.35
KDM5C-211ENST00000477109 RBM33Q96EV2 1170 aaKnown RBP17.23■□□□□ 0.35
KDM5C-211ENST00000477109 KDM5AP29375 1690 aaKnown RBP17.21■□□□□ 0.35
KDM5C-211ENST00000477109 PROSER2Q86WR7 435 aaPredicted RBP17.21■□□□□ 0.35
KDM5C-211ENST00000477109 RGS17Q9UGC6 210 aaPredicted RBP17.21■□□□□ 0.35
KDM5C-211ENST00000477109 NOS1P29475 1434 aa17.21■□□□□ 0.34
KDM5C-211ENST00000477109 FAM135BQ49AJ0 1406 aa17.21■□□□□ 0.34
KDM5C-211ENST00000477109 BCANQ96GW7 911 aa17.2■□□□□ 0.34
KDM5C-211ENST00000477109 TET3O43151 1660 aa17.2■□□□□ 0.34
KDM5C-211ENST00000477109 ADGRB3O60242 1522 aa17.18■□□□□ 0.34
KDM5C-211ENST00000477109 SLC52A1Q9NWF4 448 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms