RNA–Protein interactions for RNA: ENST00000476978.1

TCEA3-205, Transcript of transcription elongation factor A3, humanhuman

TSL 3

Gene TCEA3, Length 855 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCEA3-205ENST00000476978 PLA2R1Q13018 1463 aa11.33□□□□□ -0.6
TCEA3-205ENST00000476978 CCDC141Q6ZP82 1450 aa11.33□□□□□ -0.6
TCEA3-205ENST00000476978 MYO3AQ8NEV4 1616 aa11.33□□□□□ -0.6
TCEA3-205ENST00000476978 TCOF1Q13428 1488 aaKnown RBP11.32□□□□□ -0.6
TCEA3-205ENST00000476978 MAP3K1Q13233 1512 aa11.32□□□□□ -0.6
TCEA3-205ENST00000476978 KIF3BO15066 747 aa11.32□□□□□ -0.6
TCEA3-205ENST00000476978 CLTCQ00610 1675 aaKnown RBP11.32□□□□□ -0.6
TCEA3-205ENST00000476978 HSPA1LP34931 641 aa11.31□□□□□ -0.6
TCEA3-205ENST00000476978 PKD2Q13563 968 aa11.31□□□□□ -0.6
TCEA3-205ENST00000476978 CEP170BQ9Y4F5 1589 aaPredicted RBP11.31□□□□□ -0.6
TCEA3-205ENST00000476978 PTPRKQ15262 1439 aa11.3□□□□□ -0.6
TCEA3-205ENST00000476978 APLP2Q06481 763 aa11.29□□□□□ -0.6
TCEA3-205ENST00000476978 SCAF1Q9H7N4 1312 aaKnown RBP11.29□□□□□ -0.6
TCEA3-205ENST00000476978 ARHGEF5Q12774 1597 aa11.28□□□□□ -0.6
TCEA3-205ENST00000476978 WASHC2CQ9Y4E1 1318 aa11.28□□□□□ -0.6
TCEA3-205ENST00000476978 MIA2Q96PC5 1412 aa11.27□□□□□ -0.6
TCEA3-205ENST00000476978 PIP4K2BP78356 416 aa11.27□□□□□ -0.61
TCEA3-205ENST00000476978 MYOM3Q5VTT5 1437 aa11.26□□□□□ -0.61
TCEA3-205ENST00000476978 FBXO31Q5XUX0 539 aaPredicted RBP11.26□□□□□ -0.61
TCEA3-205ENST00000476978 CPS1P31327 1500 aa11.25□□□□□ -0.61
TCEA3-205ENST00000476978 TOM1O60784 492 aa11.25□□□□□ -0.61
TCEA3-205ENST00000476978 POLR1AO95602 1720 aaPredicted RBP11.25□□□□□ -0.61
TCEA3-205ENST00000476978 DNMT1P26358 1616 aaKnown RBP11.24□□□□□ -0.61
TCEA3-205ENST00000476978 PHF23Q9BUL5 403 aaPredicted RBP11.24□□□□□ -0.61
TCEA3-205ENST00000476978 KDM5DQ9BY66 1539 aa11.24□□□□□ -0.61
TCEA3-205ENST00000476978 TNRQ92752 1358 aa11.23□□□□□ -0.61
TCEA3-205ENST00000476978 A2ML1A8K2U0 1454 aa11.23□□□□□ -0.61
TCEA3-205ENST00000476978 FAM135AQ9P2D6 1515 aa11.23□□□□□ -0.61
TCEA3-205ENST00000476978 NEURL4Q96JN8 1562 aa11.23□□□□□ -0.61
TCEA3-205ENST00000476978 MAST1Q9Y2H9 1570 aa11.23□□□□□ -0.61
TCEA3-205ENST00000476978 PZPP20742 1482 aa11.22□□□□□ -0.61
TCEA3-205ENST00000476978 ALKQ9UM73 1620 aa11.22□□□□□ -0.61
TCEA3-205ENST00000476978 SHANK2Q9UPX8 1470 aa11.22□□□□□ -0.61
TCEA3-205ENST00000476978 RRP7BPQ9NSQ0 103 aa11.2□□□□□ -0.62
TCEA3-205ENST00000476978 ABCC5O15440 1437 aa11.19□□□□□ -0.62
TCEA3-205ENST00000476978 THEMISQ8N1K5 641 aaPredicted RBP11.19□□□□□ -0.62
TCEA3-205ENST00000476978 VWDEQ8N2E2 1590 aa11.19□□□□□ -0.62
TCEA3-205ENST00000476978 RNF17Q9BXT8 1623 aaKnown RBP11.18□□□□□ -0.62
TCEA3-205ENST00000476978 ANKLE2Q86XL3 938 aa11.18□□□□□ -0.62
TCEA3-205ENST00000476978 DUOX2Q9NRD8 1548 aa11.18□□□□□ -0.62
TCEA3-205ENST00000476978 FGD6Q6ZV73 1430 aa11.18□□□□□ -0.62
TCEA3-205ENST00000476978 KIF15Q9NS87 1388 aa11.17□□□□□ -0.62
TCEA3-205ENST00000476978 PTPN23Q9H3S7 1636 aa11.17□□□□□ -0.62
TCEA3-205ENST00000476978 EIF2AK4Q9P2K8 1649 aaKnown RBP11.17□□□□□ -0.62
TCEA3-205ENST00000476978 ABCC3O15438 1527 aa11.17□□□□□ -0.62
TCEA3-205ENST00000476978 NLRP1Q9C000 1473 aa11.17□□□□□ -0.62
TCEA3-205ENST00000476978 DAPK1P53355 1430 aa11.16□□□□□ -0.62
TCEA3-205ENST00000476978 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.16□□□□□ -0.62
TCEA3-205ENST00000476978 CHIC2Q9UKJ5 165 aa11.15□□□□□ -0.62
TCEA3-205ENST00000476978 ZC3H13Q5T200 1668 aaKnown RBP11.14□□□□□ -0.63
TCEA3-205ENST00000476978 MROH1Q8NDA8 1641 aa11.14□□□□□ -0.63
TCEA3-205ENST00000476978 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.14□□□□□ -0.631e-8■■■□□ 19
TCEA3-205ENST00000476978 ERBINQ96RT1 1412 aa11.14□□□□□ -0.63
TCEA3-205ENST00000476978 UGGT1Q9NYU2 1555 aa11.14□□□□□ -0.63
TCEA3-205ENST00000476978 ANKRD30AQ9BXX3 1397 aa11.14□□□□□ -0.63
TCEA3-205ENST00000476978 STRCP1A6NGW2 1772 aa11.13□□□□□ -0.63
TCEA3-205ENST00000476978 DEPDC5O75140 1603 aa11.13□□□□□ -0.63
TCEA3-205ENST00000476978 SENP3Q9H4L4 574 aaPredicted RBP11.13□□□□□ -0.63
TCEA3-205ENST00000476978 RGS17Q9UGC6 210 aaPredicted RBP11.13□□□□□ -0.63
TCEA3-205ENST00000476978 CROCC2H7BZ55 1655 aa11.13□□□□□ -0.63
TCEA3-205ENST00000476978 MED14O60244 1454 aa11.12□□□□□ -0.63
TCEA3-205ENST00000476978 ERVK-7P63135 1459 aa11.12□□□□□ -0.63
TCEA3-205ENST00000476978 NPHP4O75161 1426 aaPredicted RBP11.12□□□□□ -0.63
TCEA3-205ENST00000476978 FAM50AQ14320 339 aaKnown RBP11.12□□□□□ -0.63
TCEA3-205ENST00000476978 SYNMO15061 1565 aa11.11□□□□□ -0.63
TCEA3-205ENST00000476978 IQGAP1P46940 1657 aa11.11□□□□□ -0.63
TCEA3-205ENST00000476978 ARHGAP31Q2M1Z3 1444 aa11.11□□□□□ -0.63
TCEA3-205ENST00000476978 LRRC7Q96NW7 1537 aa11.11□□□□□ -0.63
TCEA3-205ENST00000476978 KANK1Q14678 1352 aa11.11□□□□□ -0.63
TCEA3-205ENST00000476978 CFAP65Q6ZU64 1925 aaKnown RBP11.11□□□□□ -0.63
TCEA3-205ENST00000476978 PRDM15P57071 1507 aaPredicted RBP11.1□□□□□ -0.63
TCEA3-205ENST00000476978 CEP152O94986 1710 aa11.1□□□□□ -0.63
TCEA3-205ENST00000476978 TXNDC2Q86VQ3 553 aa11.07□□□□□ -0.64
TCEA3-205ENST00000476978 ADGRL2O95490 1459 aa11.06□□□□□ -0.64
TCEA3-205ENST00000476978 LTKP29376 864 aa11.06□□□□□ -0.64
TCEA3-205ENST00000476978 STAG3Q9UJ98 1225 aa11.06□□□□□ -0.64
TCEA3-205ENST00000476978 EID1Q9Y6B2 187 aa11.06□□□□□ -0.64
TCEA3-205ENST00000476978 LMTK2Q8IWU2 1503 aa11.05□□□□□ -0.64
TCEA3-205ENST00000476978 IDI1Q13907 227 aa11.05□□□□□ -0.64
TCEA3-205ENST00000476978 POTEAQ6S8J7 498 aa11.05□□□□□ -0.64
TCEA3-205ENST00000476978 UBR1Q8IWV7 1749 aa11.05□□□□□ -0.64
TCEA3-205ENST00000476978 ANKRD50Q9ULJ7 1429 aa11.05□□□□□ -0.64
TCEA3-205ENST00000476978 XIRP1Q702N8 1843 aaKnown RBP11.05□□□□□ -0.64
TCEA3-205ENST00000476978 SCAF11Q99590 1463 aaKnown RBP11.04□□□□□ -0.64
TCEA3-205ENST00000476978 ARHGAP23Q9P227 1491 aa11.03□□□□□ -0.64
TCEA3-205ENST00000476978 SLIT1O75093 1534 aa11.03□□□□□ -0.64
TCEA3-205ENST00000476978 TMEM2Q9UHN6 1383 aa11.03□□□□□ -0.64
TCEA3-205ENST00000476978 SETD1AO15047 1707 aaKnown RBP11.02□□□□□ -0.65
TCEA3-205ENST00000476978 SLC52A1Q9NWF4 448 aa11.02□□□□□ -0.65
TCEA3-205ENST00000476978 PPARGC1BQ86YN6 1023 aaKnown RBP11.01□□□□□ -0.65
TCEA3-205ENST00000476978 PIK3C2BO00750 1634 aa11.01□□□□□ -0.65
TCEA3-205ENST00000476978 NOS1P29475 1434 aa11.01□□□□□ -0.65
TCEA3-205ENST00000476978 EFCAB6Q5THR3 1501 aa11□□□□□ -0.65
TCEA3-205ENST00000476978 ROCK1Q13464 1354 aa11□□□□□ -0.65
TCEA3-205ENST00000476978 FAM135BQ49AJ0 1406 aa11□□□□□ -0.65
TCEA3-205ENST00000476978 ITGAEP38570 1179 aa10.99□□□□□ -0.65
TCEA3-205ENST00000476978 RPRD2Q5VT52 1461 aaKnown RBP10.99□□□□□ -0.65
TCEA3-205ENST00000476978 KDM5AP29375 1690 aaKnown RBP10.98□□□□□ -0.65
TCEA3-205ENST00000476978 ROBO1Q9Y6N7 1651 aa10.97□□□□□ -0.65
TCEA3-205ENST00000476978 HDGFP51858 240 aaKnown RBP10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms