RNA–Protein interactions for RNA: ENST00000476978.1

TCEA3-205, Transcript of transcription elongation factor A3, humanhuman

TSL 3

Gene TCEA3, Length 855 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCEA3-205ENST00000476978 NISCHQ9Y2I1 1504 aa17.8■□□□□ 0.44
TCEA3-205ENST00000476978 ABCC9O60706 1549 aa16.21■□□□□ 0.19
TCEA3-205ENST00000476978 CCDC180Q9P1Z9 1646 aa15.9■□□□□ 0.14
TCEA3-205ENST00000476978 DNAJC5BQ9UF47 199 aa15.54■□□□□ 0.08
TCEA3-205ENST00000476978 RB1CC1Q8TDY2 1594 aa15.28■□□□□ 0.04
TCEA3-205ENST00000476978 DCAF8L2P0C7V8 631 aa15.07■□□□□ 0
TCEA3-205ENST00000476978 NACADO15069 1562 aa15.07■□□□□ 0
TCEA3-205ENST00000476978 PABPN1Q86U42 306 aaKnown RBP eCLIP15.01□□□□□ -0.01
TCEA3-205ENST00000476978 UNC13AQ9UPW8 1703 aa14.97□□□□□ -0.01
TCEA3-205ENST00000476978 MYO15BQ96JP2 1530 aa14.87□□□□□ -0.03
TCEA3-205ENST00000476978 BICRAQ9NZM4 1560 aa14.85□□□□□ -0.03
TCEA3-205ENST00000476978 ZCCHC6Q5VYS8 1495 aaKnown RBP14.75□□□□□ -0.05
TCEA3-205ENST00000476978 DCAF1Q9Y4B6 1507 aa14.71□□□□□ -0.06
TCEA3-205ENST00000476978 CC2D2AQ9P2K1 1620 aa14.64□□□□□ -0.07
TCEA3-205ENST00000476978 CECR2Q9BXF3 1484 aa14.63□□□□□ -0.07
TCEA3-205ENST00000476978 SHROOM4Q9ULL8 1493 aa14.59□□□□□ -0.07
TCEA3-205ENST00000476978 DNAJC5Q9H3Z4 198 aa14.55□□□□□ -0.08
TCEA3-205ENST00000476978 SCRIBQ14160 1630 aa14.51□□□□□ -0.09
TCEA3-205ENST00000476978 EIF4G1Q04637 1599 aaKnown RBP14.51□□□□□ -0.09
TCEA3-205ENST00000476978 CUX2O14529 1486 aa14.12□□□□□ -0.15
TCEA3-205ENST00000476978 ERCC6Q03468 1493 aa14□□□□□ -0.17
TCEA3-205ENST00000476978 NCAPD3P42695 1498 aa13.92□□□□□ -0.18
TCEA3-205ENST00000476978 ATAD2BQ9ULI0 1458 aa13.87□□□□□ -0.19
TCEA3-205ENST00000476978 SMARCA4P51532 1647 aa13.85□□□□□ -0.19
TCEA3-205ENST00000476978 SMARCA2P51531 1590 aa13.83□□□□□ -0.2
TCEA3-205ENST00000476978 NESP48681 1621 aa13.82□□□□□ -0.2
TCEA3-205ENST00000476978 BAZ1AQ9NRL2 1556 aaPredicted RBP13.81□□□□□ -0.2
TCEA3-205ENST00000476978 HMGXB3Q12766 1538 aa13.78□□□□□ -0.2
TCEA3-205ENST00000476978 THOC2Q8NI27 1593 aaKnown RBP13.78□□□□□ -0.2
TCEA3-205ENST00000476978 TRIM41Q8WV44 630 aa13.74□□□□□ -0.21
TCEA3-205ENST00000476978 BAZ1BQ9UIG0 1483 aaKnown RBP13.74□□□□□ -0.21
TCEA3-205ENST00000476978 PEG3Q9GZU2 1588 aa13.72□□□□□ -0.21
TCEA3-205ENST00000476978 MROH2BQ7Z745 1585 aa13.71□□□□□ -0.21
TCEA3-205ENST00000476978 LAMC3Q9Y6N6 1575 aa13.67□□□□□ -0.22
TCEA3-205ENST00000476978 KIF21AQ7Z4S6 1674 aa13.66□□□□□ -0.22
TCEA3-205ENST00000476978 PDS5BQ9NTI5 1447 aa13.57□□□□□ -0.24
TCEA3-205ENST00000476978 WIZO95785 1651 aa13.54□□□□□ -0.24
TCEA3-205ENST00000476978 CADPSQ9ULU8 1353 aa13.51□□□□□ -0.25
TCEA3-205ENST00000476978 MRC2Q9UBG0 1479 aa13.49□□□□□ -0.25
TCEA3-205ENST00000476978 WDR62O43379 1518 aa13.49□□□□□ -0.25
TCEA3-205ENST00000476978 RSF1Q96T23 1441 aaPredicted RBP13.47□□□□□ -0.25
TCEA3-205ENST00000476978 OSCARQ8IYS5 282 aa13.39□□□□□ -0.27
TCEA3-205ENST00000476978 TOP2AP11388 1531 aaKnown RBP13.38□□□□□ -0.27
TCEA3-205ENST00000476978 CEP164Q9UPV0 1460 aa13.36□□□□□ -0.27
TCEA3-205ENST00000476978 CFTRP13569 1480 aa13.36□□□□□ -0.27
TCEA3-205ENST00000476978 FANCD2Q9BXW9 1451 aa13.33□□□□□ -0.28
TCEA3-205ENST00000476978 RIMBP3CA6NJZ7 1639 aa13.31□□□□□ -0.28
TCEA3-205ENST00000476978 RIMBP3BA6NNM3 1639 aa13.31□□□□□ -0.28
TCEA3-205ENST00000476978 RIMBP3Q9UFD9 1639 aa13.31□□□□□ -0.28
TCEA3-205ENST00000476978 CCDC88BA6NC98 1476 aa13.25□□□□□ -0.29
TCEA3-205ENST00000476978 URB2Q14146 1524 aaKnown RBP13.23□□□□□ -0.29
TCEA3-205ENST00000476978 ARHGEF11O15085 1522 aa13.21□□□□□ -0.29
TCEA3-205ENST00000476978 PRDM2Q13029 1718 aa13.16□□□□□ -0.3
TCEA3-205ENST00000476978 ZNF608Q9ULD9 1512 aaPredicted RBP13.13□□□□□ -0.31
TCEA3-205ENST00000476978 CYB5RLQ6IPT4 315 aa13.11□□□□□ -0.31
TCEA3-205ENST00000476978 IFT140Q96RY7 1462 aa13.1□□□□□ -0.31
TCEA3-205ENST00000476978 TRHP20396 242 aaPredicted RBP13.09□□□□□ -0.31
TCEA3-205ENST00000476978 TOPBP1Q92547 1522 aa13.08□□□□□ -0.31
TCEA3-205ENST00000476978 ABCC8Q09428 1581 aa13.08□□□□□ -0.32
TCEA3-205ENST00000476978 EIF4G3O43432 1585 aaKnown RBP13.06□□□□□ -0.32
TCEA3-205ENST00000476978 ARAP1Q96P48 1450 aa13.05□□□□□ -0.32
TCEA3-205ENST00000476978 CHD1O14646 1710 aa13.05□□□□□ -0.32
TCEA3-205ENST00000476978 DNMBPQ6XZF7 1577 aa13.03□□□□□ -0.32
TCEA3-205ENST00000476978 AEBP2Q6ZN18 517 aaPredicted RBP12.99□□□□□ -0.33
TCEA3-205ENST00000476978 SUPT5HO00267 1087 aaKnown RBP12.97□□□□□ -0.33
TCEA3-205ENST00000476978 TARBP1Q13395 1621 aaKnown RBP12.96□□□□□ -0.33
TCEA3-205ENST00000476978 AQRO60306 1485 aaKnown RBP eCLIP12.95□□□□□ -0.34
TCEA3-205ENST00000476978 POLA1P09884 1462 aaPredicted RBP12.95□□□□□ -0.34
TCEA3-205ENST00000476978 SOGA1O94964 1423 aa12.93□□□□□ -0.34
TCEA3-205ENST00000476978 FBLN2P98095 1184 aa12.92□□□□□ -0.34
TCEA3-205ENST00000476978 RAD54L2Q9Y4B4 1467 aa12.91□□□□□ -0.34
TCEA3-205ENST00000476978 TDRD9Q8NDG6 1382 aaKnown RBP12.89□□□□□ -0.35
TCEA3-205ENST00000476978 FGD5Q6ZNL6 1462 aa12.88□□□□□ -0.35
TCEA3-205ENST00000476978 CUX1P39880 1505 aa12.88□□□□□ -0.35
TCEA3-205ENST00000476978 CLASP1Q7Z460 1538 aa12.88□□□□□ -0.35
TCEA3-205ENST00000476978 SYNJ1O43426 1573 aa12.82□□□□□ -0.36
TCEA3-205ENST00000476978 SNAPC4Q5SXM2 1469 aa12.82□□□□□ -0.36
TCEA3-205ENST00000476978 WDR97A6NE52 1622 aa12.81□□□□□ -0.36
TCEA3-205ENST00000476978 CHMP7Q8WUX9 453 aaPredicted RBP12.8□□□□□ -0.36
TCEA3-205ENST00000476978 GRIN2BQ13224 1484 aa12.78□□□□□ -0.36
TCEA3-205ENST00000476978 MAGI1Q96QZ7 1491 aaPredicted RBP12.77□□□□□ -0.37
TCEA3-205ENST00000476978 GAPVD1Q14C86 1478 aa12.75□□□□□ -0.37
TCEA3-205ENST00000476978 ABCA10Q8WWZ4 1543 aa12.74□□□□□ -0.37
TCEA3-205ENST00000476978 SYNJ2O15056 1496 aa12.73□□□□□ -0.37
TCEA3-205ENST00000476978 WRNQ14191 1432 aaPredicted RBP eCLIP12.72□□□□□ -0.37
TCEA3-205ENST00000476978 PBRM1Q86U86 1689 aa12.69□□□□□ -0.38
TCEA3-205ENST00000476978 TOP2BQ02880 1626 aa12.69□□□□□ -0.38
TCEA3-205ENST00000476978 ABCA5Q8WWZ7 1642 aa12.69□□□□□ -0.38
TCEA3-205ENST00000476978 BIVM-ERCC5R4GMW8 1640 aa12.66□□□□□ -0.38
TCEA3-205ENST00000476978 ERCC6L2Q5T890 1561 aa12.64□□□□□ -0.39
TCEA3-205ENST00000476978 KIF13AQ9H1H9 1805 aa12.62□□□□□ -0.39
TCEA3-205ENST00000476978 GRIN2AQ12879 1464 aa12.61□□□□□ -0.39
TCEA3-205ENST00000476978 FHAD1B1AJZ9 1412 aa12.6□□□□□ -0.39
TCEA3-205ENST00000476978 CEP170Q5SW79 1584 aa12.59□□□□□ -0.39
TCEA3-205ENST00000476978 ERICH3Q5RHP9 1530 aa12.58□□□□□ -0.4
TCEA3-205ENST00000476978 ADAMTS12P58397 1594 aa12.58□□□□□ -0.4
TCEA3-205ENST00000476978 NUP160Q12769 1436 aa12.57□□□□□ -0.4
TCEA3-205ENST00000476978 SHROOM2Q13796 1616 aa12.55□□□□□ -0.4
TCEA3-205ENST00000476978 JPH4Q96JJ6 628 aa12.49□□□□□ -0.41
TCEA3-205ENST00000476978 ILDR1Q86SU0 546 aaPredicted RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms