RNA–Protein interactions for RNA: ENST00000476862.1

ABCB1-204, Transcript of ATP binding cassette subfamily B member 1, humanhuman

TSL 3

Gene ABCB1, Length 582 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCB1-204ENST00000476862 PTPRTO14522 1441 aa27.93■■■□□ 2.06
ABCB1-204ENST00000476862 CAMSAP1Q5T5Y3 1602 aa27.93■■■□□ 2.06
ABCB1-204ENST00000476862 MYO3AQ8NEV4 1616 aa27.92■■■□□ 2.06
ABCB1-204ENST00000476862 NCOA1Q15788 1441 aa27.92■■■□□ 2.06
ABCB1-204ENST00000476862 FGD6Q6ZV73 1430 aa27.91■■■□□ 2.06
ABCB1-204ENST00000476862 CEP170BQ9Y4F5 1589 aaPredicted RBP27.9■■■□□ 2.06
ABCB1-204ENST00000476862 TNRQ92752 1358 aa27.89■■■□□ 2.06
ABCB1-204ENST00000476862 DUOX2Q9NRD8 1548 aa27.89■■■□□ 2.06
ABCB1-204ENST00000476862 FBXO31Q5XUX0 539 aaPredicted RBP27.89■■■□□ 2.06
ABCB1-204ENST00000476862 RRP7BPQ9NSQ0 103 aa27.89■■■□□ 2.06
ABCB1-204ENST00000476862 ZNF142P52746 1687 aaPredicted RBP27.88■■■□□ 2.05
ABCB1-204ENST00000476862 PKD2Q13563 968 aa27.88■■■□□ 2.05
ABCB1-204ENST00000476862 EIF2AK4Q9P2K8 1649 aaKnown RBP27.88■■■□□ 2.05
ABCB1-204ENST00000476862 PZPP20742 1482 aa27.88■■■□□ 2.05
ABCB1-204ENST00000476862 ABCC5O15440 1437 aa27.87■■■□□ 2.05
ABCB1-204ENST00000476862 NCKAP5LQ9HCH0 1330 aa27.87■■■□□ 2.05
ABCB1-204ENST00000476862 KIF15Q9NS87 1388 aa27.86■■■□□ 2.05
ABCB1-204ENST00000476862 SHANK2Q9UPX8 1470 aa27.86■■■□□ 2.05
ABCB1-204ENST00000476862 DAPK1P53355 1430 aa27.85■■■□□ 2.05
ABCB1-204ENST00000476862 FAM50AQ14320 339 aaKnown RBP27.85■■■□□ 2.05
ABCB1-204ENST00000476862 RNF17Q9BXT8 1623 aaKnown RBP27.85■■■□□ 2.05
ABCB1-204ENST00000476862 CROCC2H7BZ55 1655 aa27.84■■■□□ 2.05
ABCB1-204ENST00000476862 A2ML1A8K2U0 1454 aa27.84■■■□□ 2.05
ABCB1-204ENST00000476862 CHIC2Q9UKJ5 165 aa27.84■■■□□ 2.05
ABCB1-204ENST00000476862 TCOF1Q13428 1488 aaKnown RBP27.83■■■□□ 2.05
ABCB1-204ENST00000476862 DNMT1P26358 1616 aaKnown RBP27.82■■■□□ 2.04
ABCB1-204ENST00000476862 ZC3H13Q5T200 1668 aaKnown RBP27.82■■■□□ 2.04
ABCB1-204ENST00000476862 ANKRD30AQ9BXX3 1397 aa27.82■■■□□ 2.04
ABCB1-204ENST00000476862 PLA2R1Q13018 1463 aa27.82■■■□□ 2.04
ABCB1-204ENST00000476862 THEMISQ8N1K5 641 aaPredicted RBP27.79■■■□□ 2.04
ABCB1-204ENST00000476862 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.79■■■□□ 2.04
ABCB1-204ENST00000476862 ERBINQ96RT1 1412 aa27.78■■■□□ 2.04
ABCB1-204ENST00000476862 ABCC3O15438 1527 aa27.77■■■□□ 2.04
ABCB1-204ENST00000476862 KANK1Q14678 1352 aa27.77■■■□□ 2.04
ABCB1-204ENST00000476862 CFAP65Q6ZU64 1925 aaKnown RBP27.77■■■□□ 2.04
ABCB1-204ENST00000476862 NLRP1Q9C000 1473 aa27.75■■■□□ 2.03
ABCB1-204ENST00000476862 CEP152O94986 1710 aa27.73■■■□□ 2.03
ABCB1-204ENST00000476862 ANKLE2Q86XL3 938 aa27.72■■■□□ 2.03
ABCB1-204ENST00000476862 UGGT1Q9NYU2 1555 aa27.69■■■□□ 2.02
ABCB1-204ENST00000476862 MROH1Q8NDA8 1641 aa27.69■■■□□ 2.02
ABCB1-204ENST00000476862 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.67■■■□□ 2.02
ABCB1-204ENST00000476862 ERVK-7P63135 1459 aa27.66■■■□□ 2.02
ABCB1-204ENST00000476862 POLR1AO95602 1720 aaPredicted RBP27.66■■■□□ 2.02
ABCB1-204ENST00000476862 SPATA31D1Q6ZQQ2 1576 aa27.65■■■□□ 2.02
ABCB1-204ENST00000476862 PRDM15P57071 1507 aaPredicted RBP27.65■■■□□ 2.02
ABCB1-204ENST00000476862 ZNF335Q9H4Z2 1342 aaPredicted RBP27.65■■■□□ 2.02
ABCB1-204ENST00000476862 LTBP4Q8N2S1 1624 aa27.63■■■□□ 2.01
ABCB1-204ENST00000476862 ADGRL2O95490 1459 aa27.61■■■□□ 2.01
ABCB1-204ENST00000476862 DEPDC5O75140 1603 aa27.6■■■□□ 2.01
ABCB1-204ENST00000476862 ARHGAP31Q2M1Z3 1444 aa27.6■■■□□ 2.01
ABCB1-204ENST00000476862 IQSEC2Q5JU85 1478 aa27.6■■■□□ 2.01
ABCB1-204ENST00000476862 PPARGC1BQ86YN6 1023 aaKnown RBP27.6■■■□□ 2.01
ABCB1-204ENST00000476862 STAG3Q9UJ98 1225 aa27.6■■■□□ 2.01
ABCB1-204ENST00000476862 ANKRD50Q9ULJ7 1429 aa27.56■■■□□ 2
ABCB1-204ENST00000476862 ITGAEP38570 1179 aa27.54■■■□□ 2
ABCB1-204ENST00000476862 NPHP4O75161 1426 aaPredicted RBP27.53■■■□□ 2
ABCB1-204ENST00000476862 EID1Q9Y6B2 187 aa27.52■■■□□ 2
ABCB1-204ENST00000476862 NEURL4Q96JN8 1562 aa27.52■■■□□ 2
ABCB1-204ENST00000476862 LMTK2Q8IWU2 1503 aa27.51■■□□□ 1.99
ABCB1-204ENST00000476862 UBAP1LF5GYI3 381 aa27.5■■□□□ 1.99
ABCB1-204ENST00000476862 UBR1Q8IWV7 1749 aa27.49■■□□□ 1.99
ABCB1-204ENST00000476862 MED14O60244 1454 aa27.48■■□□□ 1.99
ABCB1-204ENST00000476862 TXNDC2Q86VQ3 553 aa27.47■■□□□ 1.99
ABCB1-204ENST00000476862 IQGAP1P46940 1657 aa27.46■■□□□ 1.99
ABCB1-204ENST00000476862 VWDEQ8N2E2 1590 aa27.46■■□□□ 1.99
ABCB1-204ENST00000476862 ROCK1Q13464 1354 aa27.46■■□□□ 1.99
ABCB1-204ENST00000476862 CPS1P31327 1500 aa27.45■■□□□ 1.98
ABCB1-204ENST00000476862 EFCAB6Q5THR3 1501 aa27.42■■□□□ 1.98
ABCB1-204ENST00000476862 IDI1Q13907 227 aa27.42■■□□□ 1.98
ABCB1-204ENST00000476862 SLC52A1Q9NWF4 448 aa27.42■■□□□ 1.98
ABCB1-204ENST00000476862 SCAF11Q99590 1463 aaKnown RBP27.42■■□□□ 1.98
ABCB1-204ENST00000476862 PIK3C2BO00750 1634 aa27.41■■□□□ 1.98
ABCB1-204ENST00000476862 TOM1O60784 492 aa27.39■■□□□ 1.98
ABCB1-204ENST00000476862 SCAF1Q9H7N4 1312 aaKnown RBP27.38■■□□□ 1.97
ABCB1-204ENST00000476862 RPRD2Q5VT52 1461 aaKnown RBP27.38■■□□□ 1.97
ABCB1-204ENST00000476862 SLIT1O75093 1534 aa27.37■■□□□ 1.97
ABCB1-204ENST00000476862 LTKP29376 864 aa27.37■■□□□ 1.97
ABCB1-204ENST00000476862 TET3O43151 1660 aa27.36■■□□□ 1.97
ABCB1-204ENST00000476862 TMEM2Q9UHN6 1383 aa27.35■■□□□ 1.97
ABCB1-204ENST00000476862 NOS1P29475 1434 aa27.35■■□□□ 1.97
ABCB1-204ENST00000476862 ARHGAP23Q9P227 1491 aa27.35■■□□□ 1.97
ABCB1-204ENST00000476862 KDM5AP29375 1690 aaKnown RBP27.34■■□□□ 1.97
ABCB1-204ENST00000476862 BCANQ96GW7 911 aa27.34■■□□□ 1.97
ABCB1-204ENST00000476862 HDGFP51858 240 aaKnown RBP27.33■■□□□ 1.97
ABCB1-204ENST00000476862 UNC13BO14795 1591 aa27.33■■□□□ 1.97
ABCB1-204ENST00000476862 SYNMO15061 1565 aa27.33■■□□□ 1.97
ABCB1-204ENST00000476862 GCC2Q8IWJ2 1684 aa27.33■■□□□ 1.97
ABCB1-204ENST00000476862 NUP155O75694 1391 aa27.32■■□□□ 1.96
ABCB1-204ENST00000476862 PIP4K2BP78356 416 aa27.31■■□□□ 1.96
ABCB1-204ENST00000476862 CHGAP10645 457 aaKnown RBP27.3■■□□□ 1.96
ABCB1-204ENST00000476862 ADGRB3O60242 1522 aa27.27■■□□□ 1.96
ABCB1-204ENST00000476862 PPP1R15AO75807 674 aaPredicted RBP27.26■■□□□ 1.95
ABCB1-204ENST00000476862 RRBP1Q9P2E9 1410 aaKnown RBP27.24■■□□□ 1.95
ABCB1-204ENST00000476862 IQGAP3Q86VI3 1631 aa27.24■■□□□ 1.95
ABCB1-204ENST00000476862 DISP3Q9P2K9 1392 aa27.22■■□□□ 1.95
ABCB1-204ENST00000476862 E9PCH4 1651 aa27.21■■□□□ 1.95
ABCB1-204ENST00000476862 STRCP1A6NGW2 1772 aa27.2■■□□□ 1.95
ABCB1-204ENST00000476862 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.2■■□□□ 1.94
ABCB1-204ENST00000476862 SLC26A8Q96RN1 970 aa27.2■■□□□ 1.94
ABCB1-204ENST00000476862 LRRC7Q96NW7 1537 aa27.2■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms