RNA–Protein interactions for RNA: ENST00000476862.1

ABCB1-204, Transcript of ATP binding cassette subfamily B member 1, humanhuman

TSL 3

Gene ABCB1, Length 582 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCB1-204ENST00000476862 NISCHQ9Y2I1 1504 aa44.21■■■■■ 4.67
ABCB1-204ENST00000476862 CCDC180Q9P1Z9 1646 aa39.54■■■■□ 3.92
ABCB1-204ENST00000476862 ABCC9O60706 1549 aa39.24■■■■□ 3.87
ABCB1-204ENST00000476862 RB1CC1Q8TDY2 1594 aa37.54■■■■□ 3.6
ABCB1-204ENST00000476862 DCAF8L2P0C7V8 631 aa37.44■■■■□ 3.58
ABCB1-204ENST00000476862 NACADO15069 1562 aa37.34■■■■□ 3.57
ABCB1-204ENST00000476862 MYO15BQ96JP2 1530 aa36.87■■■■□ 3.49
ABCB1-204ENST00000476862 ZCCHC6Q5VYS8 1495 aaKnown RBP36.68■■■■□ 3.46
ABCB1-204ENST00000476862 PABPN1Q86U42 306 aaKnown RBP eCLIP36.63■■■■□ 3.45
ABCB1-204ENST00000476862 UNC13AQ9UPW8 1703 aa36.59■■■■□ 3.45
ABCB1-204ENST00000476862 DCAF1Q9Y4B6 1507 aa36.53■■■■□ 3.44
ABCB1-204ENST00000476862 DNAJC5BQ9UF47 199 aa36.4■■■■□ 3.42
ABCB1-204ENST00000476862 BICRAQ9NZM4 1560 aa36.27■■■■□ 3.4
ABCB1-204ENST00000476862 SCRIBQ14160 1630 aa36.08■■■■□ 3.37
ABCB1-204ENST00000476862 SHROOM4Q9ULL8 1493 aa35.92■■■■□ 3.34
ABCB1-204ENST00000476862 CC2D2AQ9P2K1 1620 aa35.43■■■■□ 3.26
ABCB1-204ENST00000476862 EIF4G1Q04637 1599 aaKnown RBP35.43■■■■□ 3.26
ABCB1-204ENST00000476862 CECR2Q9BXF3 1484 aa35.32■■■■□ 3.24
ABCB1-204ENST00000476862 SMARCA4P51532 1647 aa34.42■■■■□ 3.1
ABCB1-204ENST00000476862 NCAPD3P42695 1498 aa34.42■■■■□ 3.1
ABCB1-204ENST00000476862 ATAD2BQ9ULI0 1458 aa34.36■■■■□ 3.09
ABCB1-204ENST00000476862 SMARCA2P51531 1590 aa34.36■■■■□ 3.09
ABCB1-204ENST00000476862 BAZ1AQ9NRL2 1556 aaPredicted RBP34.35■■■■□ 3.09
ABCB1-204ENST00000476862 HMGXB3Q12766 1538 aa34.2■■■■□ 3.06
ABCB1-204ENST00000476862 BAZ1BQ9UIG0 1483 aaKnown RBP34.12■■■■□ 3.05
ABCB1-204ENST00000476862 MROH2BQ7Z745 1585 aa34.04■■■■□ 3.04
ABCB1-204ENST00000476862 PEG3Q9GZU2 1588 aa34.03■■■■□ 3.04
ABCB1-204ENST00000476862 ERCC6Q03468 1493 aa33.96■■■■□ 3.03
ABCB1-204ENST00000476862 NESP48681 1621 aa33.75■■■□□ 2.99
ABCB1-204ENST00000476862 CUX2O14529 1486 aa33.69■■■□□ 2.98
ABCB1-204ENST00000476862 WIZO95785 1651 aa33.69■■■□□ 2.98
ABCB1-204ENST00000476862 LAMC3Q9Y6N6 1575 aa33.64■■■□□ 2.98
ABCB1-204ENST00000476862 PDS5BQ9NTI5 1447 aa33.5■■■□□ 2.95
ABCB1-204ENST00000476862 RSF1Q96T23 1441 aaPredicted RBP33.48■■■□□ 2.95
ABCB1-204ENST00000476862 CADPSQ9ULU8 1353 aa33.44■■■□□ 2.94
ABCB1-204ENST00000476862 KIF21AQ7Z4S6 1674 aa33.36■■■□□ 2.93
ABCB1-204ENST00000476862 THOC2Q8NI27 1593 aaKnown RBP33.3■■■□□ 2.92
ABCB1-204ENST00000476862 TOP2AP11388 1531 aaKnown RBP33.29■■■□□ 2.92
ABCB1-204ENST00000476862 DNAJC5Q9H3Z4 198 aa33.29■■■□□ 2.92
ABCB1-204ENST00000476862 MRC2Q9UBG0 1479 aa33.12■■■□□ 2.89
ABCB1-204ENST00000476862 CEP164Q9UPV0 1460 aa33.09■■■□□ 2.89
ABCB1-204ENST00000476862 CFTRP13569 1480 aa33.08■■■□□ 2.89
ABCB1-204ENST00000476862 FANCD2Q9BXW9 1451 aa33.05■■■□□ 2.88
ABCB1-204ENST00000476862 WDR62O43379 1518 aa32.97■■■□□ 2.87
ABCB1-204ENST00000476862 CCDC88BA6NC98 1476 aa32.92■■■□□ 2.86
ABCB1-204ENST00000476862 PRDM2Q13029 1718 aa32.83■■■□□ 2.85
ABCB1-204ENST00000476862 URB2Q14146 1524 aaKnown RBP32.69■■■□□ 2.82
ABCB1-204ENST00000476862 ABCC8Q09428 1581 aa32.5■■■□□ 2.79
ABCB1-204ENST00000476862 SUPT5HO00267 1087 aaKnown RBP32.46■■■□□ 2.79
ABCB1-204ENST00000476862 TOPBP1Q92547 1522 aa32.44■■■□□ 2.78
ABCB1-204ENST00000476862 IFT140Q96RY7 1462 aa32.41■■■□□ 2.78
ABCB1-204ENST00000476862 DNMBPQ6XZF7 1577 aa32.36■■■□□ 2.77
ABCB1-204ENST00000476862 OSCARQ8IYS5 282 aa32.32■■■□□ 2.76
ABCB1-204ENST00000476862 ZNF608Q9ULD9 1512 aaPredicted RBP32.23■■■□□ 2.75
ABCB1-204ENST00000476862 POLA1P09884 1462 aaPredicted RBP32.12■■■□□ 2.73
ABCB1-204ENST00000476862 EIF4G3O43432 1585 aaKnown RBP32.1■■■□□ 2.73
ABCB1-204ENST00000476862 TRIM41Q8WV44 630 aa32.09■■■□□ 2.73
ABCB1-204ENST00000476862 TARBP1Q13395 1621 aaKnown RBP32.08■■■□□ 2.73
ABCB1-204ENST00000476862 SOGA1O94964 1423 aa32.07■■■□□ 2.72
ABCB1-204ENST00000476862 AQRO60306 1485 aaKnown RBP eCLIP32.04■■■□□ 2.72
ABCB1-204ENST00000476862 RAD54L2Q9Y4B4 1467 aa32■■■□□ 2.71
ABCB1-204ENST00000476862 FGD5Q6ZNL6 1462 aa31.99■■■□□ 2.71
ABCB1-204ENST00000476862 CUX1P39880 1505 aa31.97■■■□□ 2.71
ABCB1-204ENST00000476862 FBLN2P98095 1184 aa31.95■■■□□ 2.71
ABCB1-204ENST00000476862 TDRD9Q8NDG6 1382 aaKnown RBP31.93■■■□□ 2.7
ABCB1-204ENST00000476862 WDR97A6NE52 1622 aa31.86■■■□□ 2.69
ABCB1-204ENST00000476862 CHD1O14646 1710 aa31.83■■■□□ 2.69
ABCB1-204ENST00000476862 CHMP7Q8WUX9 453 aaPredicted RBP31.75■■■□□ 2.67
ABCB1-204ENST00000476862 GRIN2BQ13224 1484 aa31.73■■■□□ 2.67
ABCB1-204ENST00000476862 SNAPC4Q5SXM2 1469 aa31.73■■■□□ 2.67
ABCB1-204ENST00000476862 RIMBP3CA6NJZ7 1639 aa31.73■■■□□ 2.67
ABCB1-204ENST00000476862 RIMBP3BA6NNM3 1639 aa31.73■■■□□ 2.67
ABCB1-204ENST00000476862 RIMBP3Q9UFD9 1639 aa31.73■■■□□ 2.67
ABCB1-204ENST00000476862 MAGI1Q96QZ7 1491 aaPredicted RBP31.68■■■□□ 2.66
ABCB1-204ENST00000476862 WRNQ14191 1432 aaPredicted RBP eCLIP31.66■■■□□ 2.66
ABCB1-204ENST00000476862 GAPVD1Q14C86 1478 aa31.66■■■□□ 2.66
ABCB1-204ENST00000476862 ARHGEF11O15085 1522 aa31.65■■■□□ 2.66
ABCB1-204ENST00000476862 ABCA10Q8WWZ4 1543 aa31.64■■■□□ 2.66
ABCB1-204ENST00000476862 PBRM1Q86U86 1689 aa31.6■■■□□ 2.65
ABCB1-204ENST00000476862 TOP2BQ02880 1626 aa31.59■■■□□ 2.65
ABCB1-204ENST00000476862 BIVM-ERCC5R4GMW8 1640 aa31.57■■■□□ 2.64
ABCB1-204ENST00000476862 SYNJ2O15056 1496 aa31.57■■■□□ 2.64
ABCB1-204ENST00000476862 SYNJ1O43426 1573 aa31.55■■■□□ 2.64
ABCB1-204ENST00000476862 CYB5RLQ6IPT4 315 aa31.54■■■□□ 2.64
ABCB1-204ENST00000476862 ABCA5Q8WWZ7 1642 aa31.52■■■□□ 2.64
ABCB1-204ENST00000476862 CLASP1Q7Z460 1538 aa31.4■■■□□ 2.62
ABCB1-204ENST00000476862 ARAP1Q96P48 1450 aa31.33■■■□□ 2.61
ABCB1-204ENST00000476862 GRIN2AQ12879 1464 aa31.28■■■□□ 2.6
ABCB1-204ENST00000476862 FHAD1B1AJZ9 1412 aa31.28■■■□□ 2.6
ABCB1-204ENST00000476862 ERICH3Q5RHP9 1530 aa31.28■■■□□ 2.6
ABCB1-204ENST00000476862 ADAMTS12P58397 1594 aa31.27■■■□□ 2.6
ABCB1-204ENST00000476862 TRHP20396 242 aaPredicted RBP31.17■■■□□ 2.58
ABCB1-204ENST00000476862 NUP160Q12769 1436 aa31.12■■■□□ 2.57
ABCB1-204ENST00000476862 CEP170Q5SW79 1584 aa31.11■■■□□ 2.57
ABCB1-204ENST00000476862 KIF27Q86VH2 1401 aa31.07■■■□□ 2.57
ABCB1-204ENST00000476862 IGF1RP08069 1367 aa30.94■■■□□ 2.54
ABCB1-204ENST00000476862 JPH4Q96JJ6 628 aa30.94■■■□□ 2.54
ABCB1-204ENST00000476862 SHROOM2Q13796 1616 aa30.93■■■□□ 2.54
ABCB1-204ENST00000476862 CUL7Q14999 1698 aa30.92■■■□□ 2.54
ABCB1-204ENST00000476862 ERCC6L2Q5T890 1561 aa30.92■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms