RNA–Protein interactions for RNA: ENST00000475819.1

LMNB2-202, Transcript of lamin B2, humanhuman

TSL 5

Gene LMNB2, Length 885 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB2-202ENST00000475819 PKD2Q13563 968 aa26.19■■□□□ 1.78
LMNB2-202ENST00000475819 PPP6R1Q9UPN7 881 aa26.19■■□□□ 1.78
LMNB2-202ENST00000475819 TCOF1Q13428 1488 aaKnown RBP26.18■■□□□ 1.78
LMNB2-202ENST00000475819 A2ML1A8K2U0 1454 aa26.17■■□□□ 1.78
LMNB2-202ENST00000475819 POLR1AO95602 1720 aaPredicted RBP26.17■■□□□ 1.78
LMNB2-202ENST00000475819 DHX29Q7Z478 1369 aaKnown RBP26.17■■□□□ 1.78
LMNB2-202ENST00000475819 KIF3BO15066 747 aa26.16■■□□□ 1.78
LMNB2-202ENST00000475819 DNMT1P26358 1616 aaKnown RBP26.16■■□□□ 1.78
LMNB2-202ENST00000475819 UBAP1LF5GYI3 381 aa26.13■■□□□ 1.77
LMNB2-202ENST00000475819 FAM135AQ9P2D6 1515 aa26.13■■□□□ 1.77
LMNB2-202ENST00000475819 TNRQ92752 1358 aa26.12■■□□□ 1.77
LMNB2-202ENST00000475819 PZPP20742 1482 aa26.11■■□□□ 1.77
LMNB2-202ENST00000475819 ARHGEF5Q12774 1597 aa26.09■■□□□ 1.77
LMNB2-202ENST00000475819 WASHC2CQ9Y4E1 1318 aa26.09■■□□□ 1.77
LMNB2-202ENST00000475819 RSPH4AQ5TD94 716 aa26.06■■□□□ 1.76
LMNB2-202ENST00000475819 FBXO31Q5XUX0 539 aaPredicted RBP26.05■■□□□ 1.76
LMNB2-202ENST00000475819 TSPY4P0CV99 314 aa26.04■■□□□ 1.76
LMNB2-202ENST00000475819 TSPY10P0CW01 314 aa26.04■■□□□ 1.76
LMNB2-202ENST00000475819 SCAF1Q9H7N4 1312 aaKnown RBP26.04■■□□□ 1.76
LMNB2-202ENST00000475819 NEURL4Q96JN8 1562 aa26.03■■□□□ 1.76
LMNB2-202ENST00000475819 LRRC9Q6ZRR7 1453 aa26.02■■□□□ 1.76
LMNB2-202ENST00000475819 ZC3H13Q5T200 1668 aaKnown RBP26.01■■□□□ 1.75
LMNB2-202ENST00000475819 UGGT1Q9NYU2 1555 aa26■■□□□ 1.75
LMNB2-202ENST00000475819 NLRP1Q9C000 1473 aa26■■□□□ 1.75
LMNB2-202ENST00000475819 CPS1P31327 1500 aa25.99■■□□□ 1.75
LMNB2-202ENST00000475819 RNF17Q9BXT8 1623 aaKnown RBP25.99■■□□□ 1.75
LMNB2-202ENST00000475819 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.98■■□□□ 1.751e-6■□□□□ 8.8
LMNB2-202ENST00000475819 EIF2AK4Q9P2K8 1649 aaKnown RBP25.96■■□□□ 1.75
LMNB2-202ENST00000475819 MAST1Q9Y2H9 1570 aa25.96■■□□□ 1.75
LMNB2-202ENST00000475819 ANKLE2Q86XL3 938 aa25.95■■□□□ 1.74
LMNB2-202ENST00000475819 MIA2Q96PC5 1412 aa25.95■■□□□ 1.74
LMNB2-202ENST00000475819 ABCC3O15438 1527 aa25.94■■□□□ 1.74
LMNB2-202ENST00000475819 SHANK2Q9UPX8 1470 aa25.94■■□□□ 1.74
LMNB2-202ENST00000475819 PIP4K2BP78356 416 aa25.93■■□□□ 1.74
LMNB2-202ENST00000475819 THEMISQ8N1K5 641 aaPredicted RBP25.93■■□□□ 1.74
LMNB2-202ENST00000475819 IQGAP1P46940 1657 aa25.93■■□□□ 1.74
LMNB2-202ENST00000475819 CEP152O94986 1710 aa25.92■■□□□ 1.74
LMNB2-202ENST00000475819 DEPDC5O75140 1603 aa25.92■■□□□ 1.74
LMNB2-202ENST00000475819 NPHP4O75161 1426 aaPredicted RBP25.91■■□□□ 1.74
LMNB2-202ENST00000475819 MYOM3Q5VTT5 1437 aa25.89■■□□□ 1.74
LMNB2-202ENST00000475819 KANK4Q5T7N3 995 aaPredicted RBP25.89■■□□□ 1.74
LMNB2-202ENST00000475819 VWDEQ8N2E2 1590 aa25.88■■□□□ 1.73
LMNB2-202ENST00000475819 TOM1O60784 492 aa25.88■■□□□ 1.73
LMNB2-202ENST00000475819 ERVK-7P63135 1459 aa25.87■■□□□ 1.73
LMNB2-202ENST00000475819 MROH1Q8NDA8 1641 aa25.85■■□□□ 1.73
LMNB2-202ENST00000475819 CFAP65Q6ZU64 1925 aaKnown RBP25.84■■□□□ 1.73
LMNB2-202ENST00000475819 DUOX2Q9NRD8 1548 aa25.84■■□□□ 1.73
LMNB2-202ENST00000475819 CROCC2H7BZ55 1655 aa25.84■■□□□ 1.73
LMNB2-202ENST00000475819 PPARGC1BQ86YN6 1023 aaKnown RBP25.84■■□□□ 1.73
LMNB2-202ENST00000475819 MED14O60244 1454 aa25.84■■□□□ 1.73
LMNB2-202ENST00000475819 HSPA1LP34931 641 aa25.81■■□□□ 1.72
LMNB2-202ENST00000475819 SYNMO15061 1565 aa25.81■■□□□ 1.72
LMNB2-202ENST00000475819 MED1Q15648 1581 aaPredicted RBP25.81■■□□□ 1.72
LMNB2-202ENST00000475819 UBR1Q8IWV7 1749 aa25.8■■□□□ 1.72
LMNB2-202ENST00000475819 KIF15Q9NS87 1388 aa25.78■■□□□ 1.72
LMNB2-202ENST00000475819 PRDM15P57071 1507 aaPredicted RBP25.78■■□□□ 1.72
LMNB2-202ENST00000475819 PTPN23Q9H3S7 1636 aa25.77■■□□□ 1.72
LMNB2-202ENST00000475819 STRCP1A6NGW2 1772 aa25.75■■□□□ 1.71
LMNB2-202ENST00000475819 SENP3Q9H4L4 574 aaPredicted RBP25.75■■□□□ 1.71
LMNB2-202ENST00000475819 SCAF11Q99590 1463 aaKnown RBP25.74■■□□□ 1.71
LMNB2-202ENST00000475819 ERBINQ96RT1 1412 aa25.74■■□□□ 1.71
LMNB2-202ENST00000475819 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.71■■□□□ 1.71
LMNB2-202ENST00000475819 LRRC7Q96NW7 1537 aa25.7■■□□□ 1.7
LMNB2-202ENST00000475819 RRP7BPQ9NSQ0 103 aa25.7■■□□□ 1.7
LMNB2-202ENST00000475819 PHF23Q9BUL5 403 aaPredicted RBP25.69■■□□□ 1.7
LMNB2-202ENST00000475819 KANK1Q14678 1352 aa25.69■■□□□ 1.7
LMNB2-202ENST00000475819 ALKQ9UM73 1620 aa25.68■■□□□ 1.7
LMNB2-202ENST00000475819 ABCC5O15440 1437 aa25.68■■□□□ 1.7
LMNB2-202ENST00000475819 DAPK1P53355 1430 aa25.68■■□□□ 1.7
LMNB2-202ENST00000475819 PIK3C2BO00750 1634 aa25.67■■□□□ 1.7
LMNB2-202ENST00000475819 STAG3Q9UJ98 1225 aa25.66■■□□□ 1.7
LMNB2-202ENST00000475819 SLIT1O75093 1534 aa25.65■■□□□ 1.7
LMNB2-202ENST00000475819 ARHGAP31Q2M1Z3 1444 aa25.64■■□□□ 1.7
LMNB2-202ENST00000475819 EID1Q9Y6B2 187 aa25.64■■□□□ 1.7
LMNB2-202ENST00000475819 FGD6Q6ZV73 1430 aa25.63■■□□□ 1.69
LMNB2-202ENST00000475819 RRBP1Q9P2E9 1410 aaKnown RBP25.63■■□□□ 1.69
LMNB2-202ENST00000475819 TRIM26Q12899 539 aaPredicted RBP25.63■■□□□ 1.69
LMNB2-202ENST00000475819 TXNDC2Q86VQ3 553 aa25.63■■□□□ 1.69
LMNB2-202ENST00000475819 ARHGAP23Q9P227 1491 aa25.62■■□□□ 1.69
LMNB2-202ENST00000475819 ANKRD30AQ9BXX3 1397 aa25.6■■□□□ 1.69
LMNB2-202ENST00000475819 CHIC2Q9UKJ5 165 aa25.59■■□□□ 1.69
LMNB2-202ENST00000475819 EFCAB6Q5THR3 1501 aa25.58■■□□□ 1.69
LMNB2-202ENST00000475819 LTKP29376 864 aa25.58■■□□□ 1.69
LMNB2-202ENST00000475819 XIRP1Q702N8 1843 aaKnown RBP25.55■■□□□ 1.68
LMNB2-202ENST00000475819 TMEM2Q9UHN6 1383 aa25.55■■□□□ 1.68
LMNB2-202ENST00000475819 KDM5AP29375 1690 aaKnown RBP25.55■■□□□ 1.68
LMNB2-202ENST00000475819 LMTK2Q8IWU2 1503 aa25.53■■□□□ 1.68
LMNB2-202ENST00000475819 ADGRB3O60242 1522 aa25.51■■□□□ 1.67
LMNB2-202ENST00000475819 FAM50AQ14320 339 aaKnown RBP25.47■■□□□ 1.67
LMNB2-202ENST00000475819 BCANQ96GW7 911 aa25.47■■□□□ 1.67
LMNB2-202ENST00000475819 IDI1Q13907 227 aa25.45■■□□□ 1.66
LMNB2-202ENST00000475819 ADGRL2O95490 1459 aa25.44■■□□□ 1.66
LMNB2-202ENST00000475819 TMEM94Q12767 1356 aa25.44■■□□□ 1.66
LMNB2-202ENST00000475819 SLC26A8Q96RN1 970 aa25.43■■□□□ 1.66
LMNB2-202ENST00000475819 NOS1P29475 1434 aa25.42■■□□□ 1.66
LMNB2-202ENST00000475819 GCC2Q8IWJ2 1684 aa25.41■■□□□ 1.66
LMNB2-202ENST00000475819 ROBO1Q9Y6N7 1651 aa25.4■■□□□ 1.66
LMNB2-202ENST00000475819 ANKRD50Q9ULJ7 1429 aa25.39■■□□□ 1.66
LMNB2-202ENST00000475819 MYO5BQ9ULV0 1848 aa25.39■■□□□ 1.65
LMNB2-202ENST00000475819 NKTRP30414 1462 aaKnown RBP25.39■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms