RNA–Protein interactions for RNA: ENST00000474691.1

EPCAM-205, Transcript of epithelial cell adhesion molecule, humanhuman

TSL 5

Gene EPCAM, Length 714 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-205ENST00000474691 CCDC141Q6ZP82 1450 aa21.92■■□□□ 1.1
EPCAM-205ENST00000474691 SCAF1Q9H7N4 1312 aaKnown RBP21.92■■□□□ 1.1
EPCAM-205ENST00000474691 SOCS7O14512 581 aa21.92■■□□□ 1.1
EPCAM-205ENST00000474691 ZNF142P52746 1687 aaPredicted RBP21.91■■□□□ 1.1
EPCAM-205ENST00000474691 A2ML1A8K2U0 1454 aa21.91■■□□□ 1.1
EPCAM-205ENST00000474691 TNRQ92752 1358 aa21.91■■□□□ 1.1
EPCAM-205ENST00000474691 SPATA31D1Q6ZQQ2 1576 aa21.91■■□□□ 1.1
EPCAM-205ENST00000474691 FBXO31Q5XUX0 539 aaPredicted RBP21.89■■□□□ 1.09
EPCAM-205ENST00000474691 TCOF1Q13428 1488 aaKnown RBP21.89■■□□□ 1.09
EPCAM-205ENST00000474691 NCOA2Q15596 1464 aa21.89■■□□□ 1.09
EPCAM-205ENST00000474691 ANKLE2Q86XL3 938 aa21.88■■□□□ 1.09
EPCAM-205ENST00000474691 CAMSAP2Q08AD1 1489 aa21.88■■□□□ 1.09
EPCAM-205ENST00000474691 THEMISQ8N1K5 641 aaPredicted RBP21.87■■□□□ 1.09
EPCAM-205ENST00000474691 TOM1O60784 492 aa21.85■■□□□ 1.09
EPCAM-205ENST00000474691 KDM5DQ9BY66 1539 aa21.85■■□□□ 1.09
EPCAM-205ENST00000474691 PIP4K2BP78356 416 aa21.83■■□□□ 1.09
EPCAM-205ENST00000474691 DNMT1P26358 1616 aaKnown RBP21.83■■□□□ 1.08
EPCAM-205ENST00000474691 PZPP20742 1482 aa21.83■■□□□ 1.08
EPCAM-205ENST00000474691 FAM135AQ9P2D6 1515 aa21.81■■□□□ 1.08
EPCAM-205ENST00000474691 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.8■■□□□ 1.08
EPCAM-205ENST00000474691 MIA2Q96PC5 1412 aa21.79■■□□□ 1.08
EPCAM-205ENST00000474691 NLRP1Q9C000 1473 aa21.77■■□□□ 1.07
EPCAM-205ENST00000474691 CPS1P31327 1500 aa21.76■■□□□ 1.07
EPCAM-205ENST00000474691 UGGT1Q9NYU2 1555 aa21.75■■□□□ 1.07
EPCAM-205ENST00000474691 APLP2Q06481 763 aa21.75■■□□□ 1.07
EPCAM-205ENST00000474691 ARHGEF5Q12774 1597 aa21.74■■□□□ 1.07
EPCAM-205ENST00000474691 SHANK2Q9UPX8 1470 aa21.74■■□□□ 1.07
EPCAM-205ENST00000474691 VPS8Q8N3P4 1428 aa21.73■■□□□ 1.07
EPCAM-205ENST00000474691 NPHP4O75161 1426 aaPredicted RBP21.72■■□□□ 1.07
EPCAM-205ENST00000474691 POLR1AO95602 1720 aaPredicted RBP21.72■■□□□ 1.07
EPCAM-205ENST00000474691 LRRC9Q6ZRR7 1453 aa21.72■■□□□ 1.07
EPCAM-205ENST00000474691 HSPA1LP34931 641 aa21.71■■□□□ 1.07
EPCAM-205ENST00000474691 LOC105371045A0A1W2PR82 267 aa21.7■■□□□ 1.06
EPCAM-205ENST00000474691 NEURL4Q96JN8 1562 aa21.67■■□□□ 1.06
EPCAM-205ENST00000474691 MYOM3Q5VTT5 1437 aa21.66■■□□□ 1.06
EPCAM-205ENST00000474691 FOXD1Q16676 465 aa21.66■■□□□ 1.06
EPCAM-205ENST00000474691 KANK4Q5T7N3 995 aaPredicted RBP21.66■■□□□ 1.06
EPCAM-205ENST00000474691 STAG3Q9UJ98 1225 aa21.65■■□□□ 1.06
EPCAM-205ENST00000474691 MAST1Q9Y2H9 1570 aa21.63■■□□□ 1.05
EPCAM-205ENST00000474691 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.63■■□□□ 1.05
EPCAM-205ENST00000474691 ABCC3O15438 1527 aa21.63■■□□□ 1.05
EPCAM-205ENST00000474691 MED14O60244 1454 aa21.63■■□□□ 1.05
EPCAM-205ENST00000474691 ZC3H13Q5T200 1668 aaKnown RBP21.63■■□□□ 1.05
EPCAM-205ENST00000474691 EID1Q9Y6B2 187 aa21.62■■□□□ 1.05
EPCAM-205ENST00000474691 DEPDC5O75140 1603 aa21.62■■□□□ 1.05
EPCAM-205ENST00000474691 ERVK-7P63135 1459 aa21.61■■□□□ 1.05
EPCAM-205ENST00000474691 RRP7BPQ9NSQ0 103 aa21.61■■□□□ 1.05
EPCAM-205ENST00000474691 RNF17Q9BXT8 1623 aaKnown RBP21.61■■□□□ 1.05
EPCAM-205ENST00000474691 EIF2AK4Q9P2K8 1649 aaKnown RBP21.6■■□□□ 1.05
EPCAM-205ENST00000474691 KANK1Q14678 1352 aa21.6■■□□□ 1.05
EPCAM-205ENST00000474691 DUOX2Q9NRD8 1548 aa21.6■■□□□ 1.05
EPCAM-205ENST00000474691 TXNDC2Q86VQ3 553 aa21.59■■□□□ 1.05
EPCAM-205ENST00000474691 IQGAP1P46940 1657 aa21.59■■□□□ 1.05
EPCAM-205ENST00000474691 MAP3K1Q13233 1512 aa21.59■■□□□ 1.05
EPCAM-205ENST00000474691 VWDEQ8N2E2 1590 aa21.58■■□□□ 1.05
EPCAM-205ENST00000474691 KIF15Q9NS87 1388 aa21.58■■□□□ 1.04
EPCAM-205ENST00000474691 MED1Q15648 1581 aaPredicted RBP21.53■■□□□ 1.04
EPCAM-205ENST00000474691 SCAF11Q99590 1463 aaKnown RBP21.53■■□□□ 1.04
EPCAM-205ENST00000474691 ERBINQ96RT1 1412 aa21.53■■□□□ 1.04
EPCAM-205ENST00000474691 CFAP65Q6ZU64 1925 aaKnown RBP21.53■■□□□ 1.04
EPCAM-205ENST00000474691 CEP152O94986 1710 aa21.52■■□□□ 1.03
EPCAM-205ENST00000474691 CHIC2Q9UKJ5 165 aa21.51■■□□□ 1.03
EPCAM-205ENST00000474691 LRRC7Q96NW7 1537 aa21.5■■□□□ 1.03
EPCAM-205ENST00000474691 BCANQ96GW7 911 aa21.5■■□□□ 1.03
EPCAM-205ENST00000474691 ARHGAP31Q2M1Z3 1444 aa21.49■■□□□ 1.03
EPCAM-205ENST00000474691 LTKP29376 864 aa21.49■■□□□ 1.03
EPCAM-205ENST00000474691 ANKRD30AQ9BXX3 1397 aa21.48■■□□□ 1.03
EPCAM-205ENST00000474691 ABCC5O15440 1437 aa21.48■■□□□ 1.03
EPCAM-205ENST00000474691 SYNMO15061 1565 aa21.48■■□□□ 1.03
EPCAM-205ENST00000474691 MROH1Q8NDA8 1641 aa21.47■■□□□ 1.03
EPCAM-205ENST00000474691 UBR1Q8IWV7 1749 aa21.46■■□□□ 1.03
EPCAM-205ENST00000474691 PTPN23Q9H3S7 1636 aa21.46■■□□□ 1.03
EPCAM-205ENST00000474691 DAPK1P53355 1430 aa21.46■■□□□ 1.03
EPCAM-205ENST00000474691 PRDM15P57071 1507 aaPredicted RBP21.45■■□□□ 1.02
EPCAM-205ENST00000474691 TMEM2Q9UHN6 1383 aa21.43■■□□□ 1.02
EPCAM-205ENST00000474691 SLIT1O75093 1534 aa21.43■■□□□ 1.02
EPCAM-205ENST00000474691 ARHGAP23Q9P227 1491 aa21.42■■□□□ 1.02
EPCAM-205ENST00000474691 FGD6Q6ZV73 1430 aa21.41■■□□□ 1.02
EPCAM-205ENST00000474691 IDI1Q13907 227 aa21.41■■□□□ 1.02
EPCAM-205ENST00000474691 FAM50AQ14320 339 aaKnown RBP21.41■■□□□ 1.02
EPCAM-205ENST00000474691 PROSER2Q86WR7 435 aaPredicted RBP21.4■■□□□ 1.02
EPCAM-205ENST00000474691 CROCC2H7BZ55 1655 aa21.4■■□□□ 1.02
EPCAM-205ENST00000474691 STRCP1A6NGW2 1772 aa21.39■■□□□ 1.01
EPCAM-205ENST00000474691 KCNA6P17658 529 aa21.38■■□□□ 1.01
EPCAM-205ENST00000474691 HDGFP51858 240 aaKnown RBP21.38■■□□□ 1.01
EPCAM-205ENST00000474691 SLC26A8Q96RN1 970 aa21.38■■□□□ 1.01
EPCAM-205ENST00000474691 EFCAB6Q5THR3 1501 aa21.38■■□□□ 1.01
EPCAM-205ENST00000474691 SLC52A1Q9NWF4 448 aa21.37■■□□□ 1.01
EPCAM-205ENST00000474691 PIK3C2BO00750 1634 aa21.37■■□□□ 1.01
EPCAM-205ENST00000474691 ALKQ9UM73 1620 aa21.37■■□□□ 1.01
EPCAM-205ENST00000474691 PPP1R15AO75807 674 aaPredicted RBP21.36■■□□□ 1.01
EPCAM-205ENST00000474691 TMEM94Q12767 1356 aa21.35■■□□□ 1.01
EPCAM-205ENST00000474691 LMTK2Q8IWU2 1503 aa21.32■■□□□ 1
EPCAM-205ENST00000474691 CHGAP10645 457 aaKnown RBP21.31■■□□□ 1
EPCAM-205ENST00000474691 FAM135BQ49AJ0 1406 aa21.3■■□□□ 1
EPCAM-205ENST00000474691 RBM33Q96EV2 1170 aaKnown RBP21.3■■□□□ 1
EPCAM-205ENST00000474691 MSH6P52701 1360 aa21.29■■□□□ 1
EPCAM-205ENST00000474691 C14orf37Q86TY3 774 aa21.28■■□□□ 1
EPCAM-205ENST00000474691 ANKRD50Q9ULJ7 1429 aa21.28■■□□□ 1
EPCAM-205ENST00000474691 NOS1P29475 1434 aa21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 115.2 ms