RNA–Protein interactions for RNA: ENST00000474136.5

APP-215, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 1,309 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-215ENST00000474136 RTEL1-TNFRSF6BF6WH68 1400 aa32.59■■■□□ 2.81
APP-215ENST00000474136 TNRQ92752 1358 aa32.59■■■□□ 2.81
APP-215ENST00000474136 KIF3BO15066 747 aa32.57■■■□□ 2.8
APP-215ENST00000474136 NEURL4Q96JN8 1562 aa32.54■■■□□ 2.8
APP-215ENST00000474136 EHBP1L1Q8N3D4 1523 aa32.52■■■□□ 2.8
APP-215ENST00000474136 SHANK2Q9UPX8 1470 aa32.51■■■□□ 2.8
APP-215ENST00000474136 TOM1O60784 492 aa32.51■■■□□ 2.79
APP-215ENST00000474136 CEP162Q5TB80 1403 aa32.5■■■□□ 2.79
APP-215ENST00000474136 PZPP20742 1482 aa32.5■■■□□ 2.79
APP-215ENST00000474136 CPS1P31327 1500 aa32.49■■■□□ 2.79
APP-215ENST00000474136 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP32.49■■■□□ 2.79
APP-215ENST00000474136 WASHC2CQ9Y4E1 1318 aa32.47■■■□□ 2.79
APP-215ENST00000474136 KDM5DQ9BY66 1539 aa32.47■■■□□ 2.79
APP-215ENST00000474136 POLR1AO95602 1720 aaPredicted RBP32.47■■■□□ 2.79
APP-215ENST00000474136 ANKLE2Q86XL3 938 aa32.47■■■□□ 2.79
APP-215ENST00000474136 MED1Q15648 1581 aaPredicted RBP32.46■■■□□ 2.79
APP-215ENST00000474136 CCDC141Q6ZP82 1450 aa32.45■■■□□ 2.78
APP-215ENST00000474136 MIA2Q96PC5 1412 aa32.42■■■□□ 2.78
APP-215ENST00000474136 THEMISQ8N1K5 641 aaPredicted RBP32.41■■■□□ 2.78
APP-215ENST00000474136 CAMSAP2Q08AD1 1489 aa32.41■■■□□ 2.78
APP-215ENST00000474136 VWDEQ8N2E2 1590 aa32.41■■■□□ 2.78
APP-215ENST00000474136 FAM135AQ9P2D6 1515 aa32.38■■■□□ 2.77
APP-215ENST00000474136 NCOA2Q15596 1464 aa32.37■■■□□ 2.77
APP-215ENST00000474136 NPHP4O75161 1426 aaPredicted RBP32.37■■■□□ 2.77
APP-215ENST00000474136 NLRP1Q9C000 1473 aa32.36■■■□□ 2.77
APP-215ENST00000474136 UGGT1Q9NYU2 1555 aa32.36■■■□□ 2.77
APP-215ENST00000474136 RSPH4AQ5TD94 716 aa32.35■■■□□ 2.77
APP-215ENST00000474136 ALKQ9UM73 1620 aa32.34■■■□□ 2.77
APP-215ENST00000474136 MED14O60244 1454 aa32.33■■■□□ 2.77
APP-215ENST00000474136 SENP3Q9H4L4 574 aaPredicted RBP32.29■■■□□ 2.76
APP-215ENST00000474136 DEPDC5O75140 1603 aa32.28■■■□□ 2.76
APP-215ENST00000474136 TSPY4P0CV99 314 aa32.27■■■□□ 2.76
APP-215ENST00000474136 TSPY10P0CW01 314 aa32.27■■■□□ 2.76
APP-215ENST00000474136 PHF23Q9BUL5 403 aaPredicted RBP32.26■■■□□ 2.75
APP-215ENST00000474136 ARHGEF5Q12774 1597 aa32.24■■■□□ 2.75
APP-215ENST00000474136 IQGAP1P46940 1657 aa32.23■■■□□ 2.75
APP-215ENST00000474136 ABCC3O15438 1527 aa32.21■■■□□ 2.75
APP-215ENST00000474136 LRRC7Q96NW7 1537 aa32.21■■■□□ 2.75
APP-215ENST00000474136 STRCP1A6NGW2 1772 aa32.2■■■□□ 2.74
APP-215ENST00000474136 ERVK-7P63135 1459 aa32.17■■■□□ 2.74
APP-215ENST00000474136 RNF17Q9BXT8 1623 aaKnown RBP32.17■■■□□ 2.74
APP-215ENST00000474136 ZC3H13Q5T200 1668 aaKnown RBP32.1■■■□□ 2.73
APP-215ENST00000474136 MROH1Q8NDA8 1641 aa32.1■■■□□ 2.73
APP-215ENST00000474136 MAST1Q9Y2H9 1570 aa32.09■■■□□ 2.73
APP-215ENST00000474136 SYNMO15061 1565 aa32.08■■■□□ 2.73
APP-215ENST00000474136 LTKP29376 864 aa32.07■■■□□ 2.72
APP-215ENST00000474136 LRRC9Q6ZRR7 1453 aa32.07■■■□□ 2.72
APP-215ENST00000474136 SCAF11Q99590 1463 aaKnown RBP32.07■■■□□ 2.72
APP-215ENST00000474136 EIF2AK4Q9P2K8 1649 aaKnown RBP32.04■■■□□ 2.72
APP-215ENST00000474136 UBR1Q8IWV7 1749 aa32.03■■■□□ 2.72
APP-215ENST00000474136 TXNDC2Q86VQ3 553 aa32.03■■■□□ 2.72
APP-215ENST00000474136 CEP152O94986 1710 aa32.02■■■□□ 2.72
APP-215ENST00000474136 CFAP65Q6ZU64 1925 aaKnown RBP32.01■■■□□ 2.72
APP-215ENST00000474136 KANK4Q5T7N3 995 aaPredicted RBP32■■■□□ 2.71
APP-215ENST00000474136 RGS17Q9UGC6 210 aaPredicted RBP32■■■□□ 2.71
APP-215ENST00000474136 ARHGAP23Q9P227 1491 aa31.99■■■□□ 2.71
APP-215ENST00000474136 SLIT1O75093 1534 aa31.96■■■□□ 2.71
APP-215ENST00000474136 DUOX2Q9NRD8 1548 aa31.96■■■□□ 2.71
APP-215ENST00000474136 VPS8Q8N3P4 1428 aa31.95■■■□□ 2.71
APP-215ENST00000474136 MYOM3Q5VTT5 1437 aa31.93■■■□□ 2.7
APP-215ENST00000474136 EID1Q9Y6B2 187 aa31.92■■■□□ 2.7
APP-215ENST00000474136 ARHGAP31Q2M1Z3 1444 aa31.92■■■□□ 2.7
APP-215ENST00000474136 KIF15Q9NS87 1388 aa31.91■■■□□ 2.7
APP-215ENST00000474136 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.9■■■□□ 2.76e-8■■□□□ 12.3
APP-215ENST00000474136 XIRP1Q702N8 1843 aaKnown RBP31.89■■■□□ 2.7
APP-215ENST00000474136 RRP7BPQ9NSQ0 103 aa31.89■■■□□ 2.7
APP-215ENST00000474136 PRDM15P57071 1507 aaPredicted RBP31.87■■■□□ 2.69
APP-215ENST00000474136 TMEM2Q9UHN6 1383 aa31.86■■■□□ 2.69
APP-215ENST00000474136 STAG3Q9UJ98 1225 aa31.84■■■□□ 2.69
APP-215ENST00000474136 FAM135BQ49AJ0 1406 aa31.84■■■□□ 2.69
APP-215ENST00000474136 PIK3C2BO00750 1634 aa31.84■■■□□ 2.69
APP-215ENST00000474136 TMEM94Q12767 1356 aa31.84■■■□□ 2.69
APP-215ENST00000474136 LOC105371045A0A1W2PR82 267 aa31.83■■■□□ 2.69
APP-215ENST00000474136 ABCC5O15440 1437 aa31.83■■■□□ 2.69
APP-215ENST00000474136 ERBINQ96RT1 1412 aa31.83■■■□□ 2.69
APP-215ENST00000474136 RBM33Q96EV2 1170 aaKnown RBP31.81■■■□□ 2.68
APP-215ENST00000474136 MAP3K1Q13233 1512 aa31.8■■■□□ 2.68
APP-215ENST00000474136 IDI1Q13907 227 aa31.79■■■□□ 2.68
APP-215ENST00000474136 POTEAQ6S8J7 498 aa31.79■■■□□ 2.68
APP-215ENST00000474136 SLC26A8Q96RN1 970 aa31.78■■■□□ 2.68
APP-215ENST00000474136 KCNA6P17658 529 aa31.77■■■□□ 2.68
APP-215ENST00000474136 KANK1Q14678 1352 aa31.75■■■□□ 2.67
APP-215ENST00000474136 EFCAB6Q5THR3 1501 aa31.75■■■□□ 2.67
APP-215ENST00000474136 PROSER2Q86WR7 435 aaPredicted RBP31.75■■■□□ 2.67
APP-215ENST00000474136 CROCC2H7BZ55 1655 aa31.72■■■□□ 2.67
APP-215ENST00000474136 DAPK1P53355 1430 aa31.71■■■□□ 2.67
APP-215ENST00000474136 TET3O43151 1660 aa31.7■■■□□ 2.67
APP-215ENST00000474136 CHIC2Q9UKJ5 165 aa31.7■■■□□ 2.66
APP-215ENST00000474136 PTPN23Q9H3S7 1636 aa31.69■■■□□ 2.66
APP-215ENST00000474136 ROBO1Q9Y6N7 1651 aa31.69■■■□□ 2.66
APP-215ENST00000474136 LMTK2Q8IWU2 1503 aa31.67■■■□□ 2.66
APP-215ENST00000474136 KDM5AP29375 1690 aaKnown RBP31.64■■■□□ 2.66
APP-215ENST00000474136 NOS1P29475 1434 aa31.64■■■□□ 2.66
APP-215ENST00000474136 BCANQ96GW7 911 aa31.62■■■□□ 2.65
APP-215ENST00000474136 ANKRD30AQ9BXX3 1397 aa31.61■■■□□ 2.65
APP-215ENST00000474136 ADGRB3O60242 1522 aa31.6■■■□□ 2.65
APP-215ENST00000474136 NKTRP30414 1462 aaKnown RBP31.6■■■□□ 2.65
APP-215ENST00000474136 FGD6Q6ZV73 1430 aa31.59■■■□□ 2.65
APP-215ENST00000474136 NWD1Q149M9 1564 aa31.59■■■□□ 2.65
APP-215ENST00000474136 MSH6P52701 1360 aa31.59■■■□□ 2.65
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms