RNA–Protein interactions for RNA: ENST00000473720.5

SMPD4-217, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 4

Gene SMPD4, Length 555 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-217ENST00000473720 KDM5DQ9BY66 1539 aa18.79■□□□□ 0.6
SMPD4-217ENST00000473720 NCKAP5LQ9HCH0 1330 aa18.79■□□□□ 0.6
SMPD4-217ENST00000473720 PPP6R1Q9UPN7 881 aa18.79■□□□□ 0.6
SMPD4-217ENST00000473720 MAST1Q9Y2H9 1570 aa18.79■□□□□ 0.6
SMPD4-217ENST00000473720 CEP152O94986 1710 aa18.79■□□□□ 0.6
SMPD4-217ENST00000473720 CROCC2H7BZ55 1655 aa18.79■□□□□ 0.6
SMPD4-217ENST00000473720 POLR1AO95602 1720 aaPredicted RBP18.77■□□□□ 0.6
SMPD4-217ENST00000473720 WASHC2CQ9Y4E1 1318 aa18.77■□□□□ 0.6
SMPD4-217ENST00000473720 PTPN23Q9H3S7 1636 aa18.77■□□□□ 0.6
SMPD4-217ENST00000473720 DNMT1P26358 1616 aaKnown RBP18.76■□□□□ 0.59
SMPD4-217ENST00000473720 FBXO31Q5XUX0 539 aaPredicted RBP18.75■□□□□ 0.59
SMPD4-217ENST00000473720 MIA2Q96PC5 1412 aa18.74■□□□□ 0.59
SMPD4-217ENST00000473720 RNF17Q9BXT8 1623 aaKnown RBP18.74■□□□□ 0.59
SMPD4-217ENST00000473720 EIF2AK4Q9P2K8 1649 aaKnown RBP18.74■□□□□ 0.59
SMPD4-217ENST00000473720 ZC3H13Q5T200 1668 aaKnown RBP18.73■□□□□ 0.59
SMPD4-217ENST00000473720 A2ML1A8K2U0 1454 aa18.72■□□□□ 0.59
SMPD4-217ENST00000473720 PZPP20742 1482 aa18.71■□□□□ 0.59
SMPD4-217ENST00000473720 LTBP4Q8N2S1 1624 aa18.71■□□□□ 0.59
SMPD4-217ENST00000473720 TNRQ92752 1358 aa18.71■□□□□ 0.59
SMPD4-217ENST00000473720 FAM135AQ9P2D6 1515 aa18.71■□□□□ 0.59
SMPD4-217ENST00000473720 PLA2R1Q13018 1463 aa18.7■□□□□ 0.58
SMPD4-217ENST00000473720 PKD2Q13563 968 aa18.68■□□□□ 0.58
SMPD4-217ENST00000473720 DUOX2Q9NRD8 1548 aa18.68■□□□□ 0.58
SMPD4-217ENST00000473720 MROH1Q8NDA8 1641 aa18.67■□□□□ 0.58
SMPD4-217ENST00000473720 TCOF1Q13428 1488 aaKnown RBP18.67■□□□□ 0.58
SMPD4-217ENST00000473720 ABCC3O15438 1527 aa18.67■□□□□ 0.58
SMPD4-217ENST00000473720 ZNF335Q9H4Z2 1342 aaPredicted RBP18.67■□□□□ 0.58
SMPD4-217ENST00000473720 RRP7BPQ9NSQ0 103 aa18.66■□□□□ 0.58
SMPD4-217ENST00000473720 ABCC5O15440 1437 aa18.64■□□□□ 0.57
SMPD4-217ENST00000473720 FGD6Q6ZV73 1430 aa18.64■□□□□ 0.57
SMPD4-217ENST00000473720 UGGT1Q9NYU2 1555 aa18.64■□□□□ 0.57
SMPD4-217ENST00000473720 CHIC2Q9UKJ5 165 aa18.63■□□□□ 0.57
SMPD4-217ENST00000473720 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.63■□□□□ 0.574e-10■■■■■ 33.4
SMPD4-217ENST00000473720 KIF15Q9NS87 1388 aa18.63■□□□□ 0.57
SMPD4-217ENST00000473720 DAPK1P53355 1430 aa18.63■□□□□ 0.57
SMPD4-217ENST00000473720 SHANK2Q9UPX8 1470 aa18.62■□□□□ 0.57
SMPD4-217ENST00000473720 NEURL4Q96JN8 1562 aa18.62■□□□□ 0.57
SMPD4-217ENST00000473720 NLRP1Q9C000 1473 aa18.61■□□□□ 0.57
SMPD4-217ENST00000473720 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.61■□□□□ 0.578e-7■■□□□ 14.1
SMPD4-217ENST00000473720 SPATA31D1Q6ZQQ2 1576 aa18.6■□□□□ 0.57
SMPD4-217ENST00000473720 UBR1Q8IWV7 1749 aa18.59■□□□□ 0.57
SMPD4-217ENST00000473720 ERVK-7P63135 1459 aa18.58■□□□□ 0.57
SMPD4-217ENST00000473720 IQGAP1P46940 1657 aa18.58■□□□□ 0.57
SMPD4-217ENST00000473720 FAM50AQ14320 339 aaKnown RBP18.58■□□□□ 0.56
SMPD4-217ENST00000473720 THEMISQ8N1K5 641 aaPredicted RBP18.58■□□□□ 0.56
SMPD4-217ENST00000473720 DEPDC5O75140 1603 aa18.58■□□□□ 0.56
SMPD4-217ENST00000473720 PRDM15P57071 1507 aaPredicted RBP18.58■□□□□ 0.56
SMPD4-217ENST00000473720 IQSEC2Q5JU85 1478 aa18.58■□□□□ 0.56
SMPD4-217ENST00000473720 ERBINQ96RT1 1412 aa18.57■□□□□ 0.56
SMPD4-217ENST00000473720 ANKLE2Q86XL3 938 aa18.57■□□□□ 0.56
SMPD4-217ENST00000473720 ANKRD30AQ9BXX3 1397 aa18.55■□□□□ 0.56
SMPD4-217ENST00000473720 UBAP1LF5GYI3 381 aa18.53■□□□□ 0.56
SMPD4-217ENST00000473720 STRCP1A6NGW2 1772 aa18.52■□□□□ 0.55
SMPD4-217ENST00000473720 KANK1Q14678 1352 aa18.52■□□□□ 0.55
SMPD4-217ENST00000473720 PIK3C2BO00750 1634 aa18.52■□□□□ 0.55
SMPD4-217ENST00000473720 NPHP4O75161 1426 aaPredicted RBP18.51■□□□□ 0.55
SMPD4-217ENST00000473720 SCAF1Q9H7N4 1312 aaKnown RBP18.49■□□□□ 0.55
SMPD4-217ENST00000473720 VWDEQ8N2E2 1590 aa18.49■□□□□ 0.55
SMPD4-217ENST00000473720 MYO5BQ9ULV0 1848 aa18.49■□□□□ 0.55
SMPD4-217ENST00000473720 CPS1P31327 1500 aa18.48■□□□□ 0.55
SMPD4-217ENST00000473720 MED14O60244 1454 aa18.47■□□□□ 0.55
SMPD4-217ENST00000473720 DISP3Q9P2K9 1392 aa18.47■□□□□ 0.55
SMPD4-217ENST00000473720 PPARGC1BQ86YN6 1023 aaKnown RBP18.47■□□□□ 0.55
SMPD4-217ENST00000473720 ARHGAP31Q2M1Z3 1444 aa18.46■□□□□ 0.55
SMPD4-217ENST00000473720 STAG3Q9UJ98 1225 aa18.45■□□□□ 0.54
SMPD4-217ENST00000473720 ADGRL2O95490 1459 aa18.45■□□□□ 0.54
SMPD4-217ENST00000473720 PIP4K2BP78356 416 aa18.44■□□□□ 0.54
SMPD4-217ENST00000473720 EFCAB6Q5THR3 1501 aa18.43■□□□□ 0.54
SMPD4-217ENST00000473720 SYNMO15061 1565 aa18.42■□□□□ 0.54
SMPD4-217ENST00000473720 SCAF11Q99590 1463 aaKnown RBP18.42■□□□□ 0.54
SMPD4-217ENST00000473720 GCC2Q8IWJ2 1684 aa18.41■□□□□ 0.54
SMPD4-217ENST00000473720 LMTK2Q8IWU2 1503 aa18.41■□□□□ 0.54
SMPD4-217ENST00000473720 TXNDC2Q86VQ3 553 aa18.41■□□□□ 0.54
SMPD4-217ENST00000473720 ANKRD50Q9ULJ7 1429 aa18.4■□□□□ 0.54
SMPD4-217ENST00000473720 ITGAEP38570 1179 aa18.4■□□□□ 0.54
SMPD4-217ENST00000473720 KDM5AP29375 1690 aaKnown RBP18.4■□□□□ 0.54
SMPD4-217ENST00000473720 XIRP1Q702N8 1843 aaKnown RBP18.39■□□□□ 0.54
SMPD4-217ENST00000473720 SLIT1O75093 1534 aa18.39■□□□□ 0.54
SMPD4-217ENST00000473720 TET3O43151 1660 aa18.39■□□□□ 0.53
SMPD4-217ENST00000473720 LTKP29376 864 aa18.39■□□□□ 0.53
SMPD4-217ENST00000473720 EID1Q9Y6B2 187 aa18.39■□□□□ 0.53
SMPD4-217ENST00000473720 TOM1O60784 492 aa18.38■□□□□ 0.53
SMPD4-217ENST00000473720 ARHGAP23Q9P227 1491 aa18.38■□□□□ 0.53
SMPD4-217ENST00000473720 IDI1Q13907 227 aa18.37■□□□□ 0.53
SMPD4-217ENST00000473720 UNC13BO14795 1591 aa18.36■□□□□ 0.53
SMPD4-217ENST00000473720 SENP3Q9H4L4 574 aaPredicted RBP18.36■□□□□ 0.53
SMPD4-217ENST00000473720 E9PCH4 1651 aa18.35■□□□□ 0.53
SMPD4-217ENST00000473720 ADGRB3O60242 1522 aa18.34■□□□□ 0.53
SMPD4-217ENST00000473720 LRRC7Q96NW7 1537 aa18.34■□□□□ 0.53
SMPD4-217ENST00000473720 TMEM2Q9UHN6 1383 aa18.33■□□□□ 0.53
SMPD4-217ENST00000473720 ILDR2Q71H61 639 aa18.33■□□□□ 0.52
SMPD4-217ENST00000473720 NOS1P29475 1434 aa18.32■□□□□ 0.52
SMPD4-217ENST00000473720 HSPA1LP34931 641 aa18.32■□□□□ 0.52
SMPD4-217ENST00000473720 ALKQ9UM73 1620 aa18.31■□□□□ 0.52
SMPD4-217ENST00000473720 BCANQ96GW7 911 aa18.31■□□□□ 0.52
SMPD4-217ENST00000473720 IQGAP3Q86VI3 1631 aa18.3■□□□□ 0.52
SMPD4-217ENST00000473720 RPRD2Q5VT52 1461 aaKnown RBP18.29■□□□□ 0.52
SMPD4-217ENST00000473720 CHGAP10645 457 aaKnown RBP18.28■□□□□ 0.52
SMPD4-217ENST00000473720 SLC26A8Q96RN1 970 aa18.28■□□□□ 0.52
SMPD4-217ENST00000473720 TMEM131LA2VDJ0 1609 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 177.5 ms